LOCUS BC033454 4169 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens F-box protein 38, mRNA (cDNA clone MGC:21031
IMAGE:4510274), complete cds.
ACCESSION BC033454
VERSION BC033454.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4169)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4169)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 28 Row: h Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45545408
This clone grew slowly and was rescued by PCR.
FEATURES Location/Qualifiers
source 1..4169
/db_xref="H-InvDB:HIT000093097"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21031 IMAGE:4510274"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4169
/gene="FBXO38"
/gene_synonym="Fbx38"
/gene_synonym="MOKA"
/gene_synonym="SP329"
/db_xref="GeneID:81545"
/db_xref="HGNC:HGNC:28844"
/db_xref="MIM:608533"
CDS 102..3443
/gene="FBXO38"
/gene_synonym="Fbx38"
/gene_synonym="MOKA"
/gene_synonym="SP329"
/codon_start=1
/product="F-box protein 38"
/protein_id="AAH33454.1"
/db_xref="GeneID:81545"
/db_xref="HGNC:HGNC:28844"
/db_xref="MIM:608533"
/translation="MGPRKKSVKTCIMNNEIPEEMTADETKDYMNQLSHEVLCHIFRY
LPLQDIMCMECLSRKLKEAVTLYLRVVRVVDLCAGRWWEYMPSGFTDASFLTLLKKMP
DVEQLYGLHPRYLERRRVRGHEAFSIPGVLEALQSCPNLVGVETSHLELVESIWTYMP
HVHILGKFRNRNGAFPIPPENKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYMKWV
RLTKPQPFKDFLCISLRTFVMRNCAGPTNSLKYVPLVTGLASARNLEHLEMVRVPFLG
GLIQHVVEDSWRSGGFRNLHTIVLGACKNALEVDLGYLIITAARRLHEVRIQPSLTKD
GVFSALKMAELEFPQFETLHLGYVDEFLLQSRMANADLVKYGLADVVENPGIITDIGM
KAVNEVFSCIKYLAIYNCPHLHNPYNWISDHSRWTRLVDINLVRCHALKLDSFGQFIE
LLPSLEFISLDQMFREPPKGCARVGLSAGAGIGVSSALVSNQNSNNDENNAQNNNANI
HDNNHHHPDDSDEENDFRQDLQPGEQQFAADALNEMEDIVQEDGEVVAESGNNTPAHS
QAIIPVDVDEEQAGPSGLQRVVKPTSITVHDSESDDEEDSLELQEVWIPKNGTRRYSE
REEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQSKQFPLEESSCEKGCQVTSEQIK
ADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSHNTASQSPDFVRTVNSGGSSEPS
PTEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPRCCCHRPQESQRRTSRCSDEERPS
TSRACVVNGPDEVAKTKPRHAMKRKRTADKSTSTSDPVIEDDHVQVLVLKSKNLVGVT
MTNCGITDLVLKDCPKMMFIHATRCRVLKHLKVENAPIVNRFDYAQCKKLNMDQVLDQ
ILRMPPERNRIIYLRPMQQVDTLTLEQKLFSGPYPYHICIIHEFSNPPNVRNKVRIRS
WMDTIANINQELIKYEFFPEATRSEEDLKKYPKYPWGREIYTLEGVVDGAPYSMISDF
PWLRSLRAAEPNSFARYDFEDDEESTIYAPRRKGQLSADICMETIGEEISEMRQMKKG
VFQRVVAIFIHYCDVNGEPVEDDYI"
BASE COUNT 1287 a 836 c 935 g 1111 t
ORIGIN
1 ccctctcaac cacaataaca ggcggagggt cggcgtaggt actttgaact caagtaaaca
61 aaagggaaga ttttctcgtt gatactggag actgcacaac aatggggcca cgaaagaaaa
121 gtgtgaaaac atgtatcatg aataatgaaa ttccagaaga aatgacagca gatgaaacaa
181 aggactatat gaatcaactt tcacatgaag tactttgcca tatttttagg tacctccctc
241 tgcaggatat catgtgtatg gaatgtcttt cccggaagct aaaggaagca gtgaccctat
301 atctgcgagt tgtgagagtt gtagatctct gtgcagggcg gtggtgggaa tacatgccaa
361 gtggctttac agatgccagt tttctaacac tattaaagaa gatgccagat gttgaacagc
421 tatatggcct tcaccctcga taccttgaga ggcgaagagt aaggggccat gaggctttta
481 gcattccagg agtcctagaa gctttgcagt catgcccaaa cttagtgggt gtggaaactt
541 ctcatttgga gttggtagaa tccatttgga catatatgcc ccatgttcat attttgggga
601 aatttcgtaa tcgtaatgga gcttttccaa ttcctcctga aaataaactg aaaattccta
661 taggagccaa aattcaaact ttacatttag ttggggtgaa tgttcctgaa attccttgta
721 tcccaatgct aaggcacctt tatatgaagt gggtaagact cactaaacca cagccattta
781 aagacttcct ttgtatcagc ttaagaactt tcgtcatgag gaactgtgca ggacccacaa
841 attccttgaa atatgtccct ttagtaacag gcttagcctc tgcccgaaac ttggaacact
901 tagaaatggt tcgagttcct ttccttggag gtcttatcca acatgttgtt gaagacagtt
961 ggagatcagg tggttttaga aatttgcaca ctattgttct gggagcttgc aaaaatgctc
1021 ttgaagtaga tcttggttac ctcatcatta ctgctgcccg taggttacat gaagttcgga
1081 tccagccttc cctaaccaaa gatggtgtct tttctgccct aaagatggca gagttggagt
1141 ttccccagtt tgaaaccctt catctaggat atgtagatga gtttttgcta cagagcagaa
1201 tggctaatgc ggatctggtg aagtatggtt tggctgatgt ggtagaaaat cctggtatca
1261 tcactgatat agggatgaaa gcagtcaatg aagttttttc ctgtatcaaa tatctggcaa
1321 tttacaattg ccctcatcta cacaacccat acaattggat ctcagaccac tcaagatgga
1381 ctcgattggt tgatatcaac ctagtacggt gccatgcttt gaagctggac tcttttggcc
1441 agtttattga attattaccc agcctagagt ttatttcact ggatcagatg tttcgtgaac
1501 cacccaaggg ttgtgctcga gttggtctga gtgcaggcgc aggaattggt gtttcatcag
1561 ctcttgttag caaccagaac tccaacaatg acgaaaataa tgcccagaat aacaatgcca
1621 acatccacga caacaatcac catcatccag atgactcaga cgaggagaat gactttcggc
1681 aagatctgca gccaggagag cagcagtttg cagctgacgc attaaatgag atggaagaca
1741 tcgtccaaga agatggagag gtggtggccg agagtggaaa taatactcca gctcacagcc
1801 aggcaattat tcctgtggat gttgatgagg aacaagcagg acccagtggt cttcagcgtg
1861 tagtaaaacc aacctcaatt actgttcatg attcagagag tgatgatgaa gaagatagtc
1921 tagaactcca agaagtctgg attcctaaga acggtactcg gcgttactct gaacgtgaag
1981 aaaaaactgg agagtcagtg cagtccagag aattgtcagt aagtggaaaa ggcaagactc
2041 cacttcgaaa gaggtacaac tcccatcaga tgggccagtc gaagcagttt cccctcgagg
2101 aaagcagctg tgagaaaggc tgtcaggtca ccagtgagca gatcaaagcc gatatgaaag
2161 cagctaggga tattcctgaa aagaaaaaaa acaaggatgt ttatcccagc tgcagcagca
2221 ccaccgccag cacagtggga aactccagct cacacaacac tgcttctcaa agccccgact
2281 ttgtaaggac ggtgaacagc ggcggctctt ccgagcctag ccctacagaa gtggatgtgt
2341 ccaggcagtg tgcctgctcc cccggtgggt cagaggactc tgaggccatg gaggagggag
2401 atgcagagag ttctgtctgc cccagatgct gctgtcacag gccccaggaa tcccaaagga
2461 gaactagcag gtgttctgat gaggaacgtc cttcaaccag ccgagcctgt gttgtgaatg
2521 gcccggatga agtagccaaa acaaagccac gtcacgccat gaaacggaag cggacagcag
2581 ataaatccac tagtacaagt gatcctgtga tcgaggatga ccatgtgcag gttcttgtat
2641 taaaatccaa gaatcttgtt ggagtcacta tgaccaattg tggaatcaca gatctagtgc
2701 taaaagactg tccaaagatg atgttcatcc atgctaccag gtgcagggta ctaaaacatt
2761 taaaggtaga aaatgcacca attgtaaacc gatttgacta tgcacagtgc aagaaactga
2821 acatggatca ggtactagac cagatactaa gaatgccacc cgagagaaac cgcatcatat
2881 acctacgccc aatgcagcag gtggacactc taactttgga gcagaagcta tttagtggtc
2941 cctaccccta tcacatctgt attatccatg aattcagtaa ccctcccaat gtccggaata
3001 aggtgcgcat tcgcagctgg atggacacta tagcaaacat caatcaagag ctcattaaat
3061 atgaattctt ccctgaagcc actcgaagtg aagaagactt aaagaaatac cccaagtacc
3121 cctgggggag agaaatctat actttagaag gtgttgtgga tggagctcca tattccatga
3181 tttctgactt cccttggctg aggtcattac gagctgcaga gcccaacagc ttcgctcgat
3241 acgactttga agacgatgaa gaaagcacta tctatgctcc tagaaggaaa ggacagctgt
3301 ctgcagacat ctgtatggaa acaataggag aggaaatttc agagatgcgt cagatgaaga
3361 agggtgtatt tcagcgagta gtggcaattt ttatccacta ttgtgatgtc aatggagagc
3421 cagttgaaga tgactacatt taattggtcc ctcctccttt ccagctattt tgtcagaaag
3481 caagtagggc catccagctg ccagagtgct ccacagggac ttgaggcatg cagttgggag
3541 gtcctggctc ggtttgctat atagggaata tataaggaac atcgaaattg tatacaaaga
3601 tttgtacata aaaaatatac aaagacgctt cctaaagtac caactttata tcatatgttt
3661 atacaattta atttaaaaat tcattttaag gaagacagat aatttgaaag acttttgttt
3721 ttcttgactt aattcatgaa gtatcatttt ttgactgagt ctccatttac ttcattctta
3781 atgattattg tcatcccttt aaatctgtgc ctttttcttc ttgagcgaag ctgtttgagt
3841 aaacctgttg aagagtgttt gtgtcttttg tgcttttttg ttgttattaa aacaccaact
3901 aaaccttata gtcaagacaa ggctctatgt ttctgtacaa agctgtagtt ctttcttagt
3961 attatagttg ccatgtttct taaaatcaag taaaaagact tatgagctta aaaaaaagtg
4021 agtttgagag ggaaatggaa aagtttccag agtatttcta gtaatttatt tccccattga
4081 attgtgtata tgctttatct tgaatataaa ataaaagttt attaaaaact ttaaaaaaaa
4141 aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//