LOCUS BC033372 1948 bp mRNA linear HUM 11-APR-2007
DEFINITION Homo sapiens AHNAK nucleoprotein 2, mRNA (cDNA clone
IMAGE:4749202), partial cds.
ACCESSION BC033372
VERSION BC033372.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1948)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1948)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: James Cleaver, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 42 Row: d Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1948
/db_xref="H-InvDB:HIT000093073"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4749202"
/tissue_type="Skin, squamous cell carcinoma"
/clone_lib="NCI_CGAP_Skn4"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene <1..1948
/gene="AHNAK2"
/db_xref="GeneID:113146"
/db_xref="HGNC:HGNC:20125"
/db_xref="MIM:608570"
CDS <1..1116
/gene="AHNAK2"
/codon_start=1
/product="AHNAK2 protein"
/protein_id="AAH33372.1"
/db_xref="GeneID:113146"
/db_xref="HGNC:HGNC:20125"
/db_xref="MIM:608570"
/translation="CKESPGLWGASILKAGAGVPGEQPVDLNLPLEAPPISKVRVHIQ
GAQVESQEVTIHSIVTPEFVDLSVPRTFSTQIVRESEIPTSEIQTPSYGFSLLKVKIP
EPHTQARVYTTMTQHSRTQEGTEEAPIQATPGVDSISGDLQPDTGEPFEMISSSVNVL
GQQTLTFEVPSGHQLADSCSDEEPAEILEFPPDDSQEATTPLADEGRAPKDKPESKKS
GLLWFWLPNIGFSSSVDETGVDSKNDVQRSAPIQTQPEARPEAELPKKQEKAGWFRFP
KLGFSSSPTKKSKSTEDGAELEEQKLQEETITFFDARESFSPEEKEEGELIGPVGTGL
DSRVMVTSAARTELILPEQDRKADDESKGSGLGPNEG"
BASE COUNT 571 a 482 c 468 g 427 t
ORIGIN
1 tgtaaggaaa gtccggggct ctggggagcc agcatcctga aggcaggtgc tggggtccct
61 ggggagcagc ctgtggacct taacctgcct ttggaagctc ccccaatttc aaaggtcaga
121 gtgcatattc agggtgctca ggttgaaagt caagaggtca ctatacacag catagtgaca
181 ccagagtttg tagatctctc agtacccagg actttttcca ctcagattgt gcgggaatca
241 gagatcccca cgtcagagat tcaaacacct tcgtacggat tttccttatt aaaagtgaaa
301 atcccagagc cccacacgca ggctagagtg tacacaacaa tgactcaaca ctctaggact
361 caggagggca cagaagaggc tcccatacaa gccaccccag gagtagactc catttctgga
421 gatctccagc ctgacactgg agaaccattt gagatgatct cttccagcgt caatgtactg
481 ggacagcaaa cactcacatt tgaagttcct tctggccacc agcttgcaga cagctgttca
541 gatgaggagc cagcagaaat tcttgagttt ccccctgatg atagccaaga ggcaaccaca
601 ccactggcag atgaaggcag ggctccaaaa gacaaaccag aaagtaaaaa atctggtctg
661 ctctggtttt ggcttccaaa cattgggttt tcctcttctg ttgatgagac aggtgttgat
721 tccaaaaatg acgtccagag atctgctccc attcaaacac agcctgaggc acgaccagag
781 gcagaactgc ctaaaaaaca ggagaaggca ggctggttcc gatttcccaa attagggttc
841 tcctcatctc ctaccaagaa aagcaaaagc accgaagatg gggcagagct ggaagaacaa
901 aaacttcaag aagaaacaat cacgtttttt gatgcccgag aaagtttctc ccctgaagag
961 aaggaagagg gtgaactgat cgggcctgtg ggcactgggc tggactccag agtgatggtg
1021 acatccgcgg caagaacaga gttaatcctg cccgagcagg acagaaaagc tgacgatgaa
1081 agcaaagggt caggcctggg accaaatgaa ggctgagagg tatggctcat cggtacaaga
1141 gagatgcaaa aaactaagtt ggaaagtaaa ggctacacac acatatggag caccccatcc
1201 cacagcacat tacatccacc tcacttcaca gaacggagaa cagagcagaa atgaccagaa
1261 cacctttgtc accatcacac agccctccta aaatggaacc aaagcttccc agctccctca
1321 aagctttgga tgcaaagaag gcaccctgac ttccacaaga caccagaatt cacacggtac
1381 tcagaggcac tgctggggaa gtttgttggt ctttattaga taaatttcca gagacctgtc
1441 cataataccc aacagaacat gactgtttct ttgaggaaag ggttataatg tctgtggtgt
1501 acaagtcgtt tttggtataa cttctttcct gctgctgctg cttcccggca aacatagttt
1561 tcctatttca ggcagagtgc ggtatattcc aggaaacact gtttcctact cacttagctt
1621 acttctttgt tgaatgcctc actaatggca agtttcaaga tgttttgggt gacaatgcac
1681 acatgctggg caaaagggtg atggccagtg gctggcagct gggccagcag aagctaggac
1741 atctgtgagt tgtcattctc atctatccat gtccactggc ctgccagcat ccgccagtgc
1801 cttgccagtg tgcacggtcc cacactgtgg cccctgagtc ccctaatgta cacgctgcag
1861 ccagaatgca gatggagctg gcttggctgt tccctggatg ggcaataaag aaagtgctgc
1921 atcccaaaaa aaaaaaaaaa aaaaaaaa
//