LOCUS BC033298 389 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens defensin, beta 1, mRNA (cDNA clone MGC:24835 IMAGE:4775720), complete cds. ACCESSION BC033298 VERSION BC033298.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 389) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 389) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (26-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: James Cleaver, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 29 Row: k Column: 24 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 50659096. FEATURES Location/Qualifiers source 1..389 /db_xref="H-InvDB:HIT000051106" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:24835 IMAGE:4775720" /tissue_type="Skin, normal" /clone_lib="NCI_CGAP_Skn3" /lab_host="DH10B" /note="Vector: pCMV-SPORT6.1" gene 1..389 /gene="DEFB1" /gene_synonym="BD1" /gene_synonym="DEFB-1" /gene_synonym="DEFB101" /gene_synonym="HBD1" /gene_synonym="MGC51822" /db_xref="GeneID:1672" /db_xref="HGNC:HGNC:2766" /db_xref="MIM:602056" CDS 61..267 /gene="DEFB1" /gene_synonym="BD1" /gene_synonym="DEFB-1" /gene_synonym="DEFB101" /gene_synonym="HBD1" /gene_synonym="MGC51822" /codon_start=1 /product="defensin, beta 1" /protein_id="AAH33298.1" /db_xref="GeneID:1672" /db_xref="HGNC:HGNC:2766" /db_xref="MIM:602056" /translation="MRTSYLLLFTLCLLLSEMASGGNFLTGLGHRSDHYNCVSSGGQC LYSACPIFTKIQGTCYRGKAKCCK" BASE COUNT 124 a 83 c 82 g 100 t ORIGIN 1 ctccaaagga gccagcgtct ccccagttcc tgaaatcctg ggtgttgcct gccagtcgcc 61 atgagaactt cctaccttct gctgtttact ctctgcttac ttttgtctga gatggcctca 121 ggtggtaact ttctcacagg ccttggccac agatctgatc attacaattg cgtcagcagt 181 ggagggcaat gtctctattc tgcctgcccg atctttacca aaattcaagg cacctgttac 241 agagggaagg ccaagtgctg caagtgagct gggagtgacc agaagaaatg acgcagaagt 301 gaaatgaact ttttataagc attcttttaa taaaggaaaa ttgcttttga agtataaaaa 361 aaaaaaaaaa aaaaaaaaaa aaaaaaaaa //