LOCUS BC033293 1570 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens major histocompatibility complex, class I, C, mRNA (cDNA clone MGC:24960 IMAGE:4780246), complete cds. ACCESSION BC033293 VERSION BC033293.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1570) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1570) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (26-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: James Cleaver, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 29 Row: m Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 52630341. FEATURES Location/Qualifiers source 1..1570 /db_xref="H-InvDB:HIT000093026" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:24960 IMAGE:4780246" /tissue_type="Skin, normal" /clone_lib="NCI_CGAP_Skn3" /lab_host="DH10B" /note="Vector: pCMV-SPORT6.1" gene 1..1570 /gene="HLA-C" /gene_synonym="Cw*1701" /gene_synonym="HLC-C" /db_xref="GeneID:3107" /db_xref="HGNC:HGNC:4933" /db_xref="MIM:142840" CDS 8..1108 /gene="HLA-C" /gene_synonym="Cw*1701" /gene_synonym="HLC-C" /codon_start=1 /product="major histocompatibility complex, class I, C" /protein_id="AAH33293.1" /db_xref="GeneID:3107" /db_xref="HGNC:HGNC:4933" /db_xref="MIM:142840" /translation="MRVMAPRALLLLLSGGLALTETWACSHSMRYFDTAVSRPGRGEP RFISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQNYKRQAQADRVSL RNLRGYYNQSEDGSHTLQRMYGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAA DTAAQITQRKLEAARAAEQLRAYLEGTCVEWLRRYLENGKETLQRAEPPKTHVTHHPL SDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSG QEQRYTCHMQHEGLQEPLTLSWEPSSQPTIPIMGIVAGLAVLVVLAVLGAVVTAMMCR RKSSGGKGGSCSQAACSNSAQGSDESLITCKA" BASE COUNT 360 a 453 c 465 g 292 t ORIGIN 1 ggccgagatg cgggtcatgg cgccccgagc cctcctcctg ctgctctcgg gaggcctggc 61 cctgaccgag acctgggcct gctcccactc catgaggtat ttcgacaccg ccgtgtcccg 121 gcccggccgc ggagagcccc gcttcatctc agtgggctac gtggacgaca cgcagttcgt 181 gcggttcgac agcgacgccg cgagtccgag aggggagccg cgggcgccgt gggtggagca 241 ggaggggccg gagtattggg accgggagac acagaactac aagcgccagg cacaggctga 301 ccgagtgagc ctgcggaacc tgcgcggcta ctacaaccag agcgaggacg ggtctcacac 361 cctccagagg atgtatggct gcgacctggg gcccgacggg cgcctcctcc gcgggtatga 421 ccagtccgcc tacgacggca aggattacat cgccctgaac gaggacctgc gctcctggac 481 cgccgcggac accgcggctc agatcaccca gcgcaagttg gaggcggccc gtgcggcgga 541 gcagctgaga gcctacctgg agggcacgtg cgtggagtgg ctccgcagat acctggagaa 601 cgggaaggag acgctgcagc gcgcagaacc cccaaagaca cacgtgaccc accaccccct 661 ctctgaccat gaggccaccc tgaggtgctg ggccctgggc ttctaccctg cggagatcac 721 actgacctgg cagcgggatg gggaggacca gacccaggac accgagcttg tggagaccag 781 gccagcagga gatggaacct tccagaagtg ggcagctgtg gtggtgcctt ctggacaaga 841 gcagagatac acgtgccata tgcagcacga ggggctgcaa gagcccctca ccctgagctg 901 ggagccatct tcccagccca ccatccccat catgggcatc gttgctggcc tggctgtcct 961 ggttgtccta gctgtccttg gagctgtggt caccgctatg atgtgtagga ggaagagctc 1021 aggtggaaaa ggagggagct gctctcaggc tgcgtgcagc aacagtgccc agggctctga 1081 tgagtctctc atcacttgta aagcctgaga cagctgcctg tgtgggactg agatgcagga 1141 tttcttcaca cctctccttt gtgacttcaa gagcctctgg catctctttc tgcaaaggcg 1201 tctgaatgtg tctgcgttcc tgttagcata atgtgaggag gtggagagac agcccacccc 1261 cgtgtccacc gtgacccctg tccccacact gacctgtgtt ccctccccga tcatctttcc 1321 tgttccagag aggtggggct ggatgtctcc atctctgtct caaattcatg gtgcactgag 1381 ctgcaacttc ttacttccct aatgaagtta agaacctgaa tataaatttg tgttctcaaa 1441 tatttgctat gaagcgttga tggattaatt aaataagtca attcctagaa gttgagagag 1501 caaataaaga cctgagaacc ttccagaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1561 aaaaaaaaaa //