LOCUS BC033223 1541 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens solute carrier family 45, member 4, mRNA (cDNA clone
IMAGE:5019517), complete cds.
ACCESSION BC033223
VERSION BC033223.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1541)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1541)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 43 Row: j Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1541
/db_xref="H-InvDB:HIT000051099"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5019517"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_42"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1541
/gene="SLC45A4"
/gene_synonym="KIAA1126"
/db_xref="GeneID:57210"
/db_xref="HGNC:HGNC:29196"
CDS 542..1120
/gene="SLC45A4"
/gene_synonym="KIAA1126"
/codon_start=1
/product="SLC45A4 protein"
/protein_id="AAH33223.1"
/db_xref="GeneID:57210"
/db_xref="HGNC:HGNC:29196"
/translation="MDTFSHAVSLLNFGPALATTQRVRDCCCGVSLVCPSASHQHAPL
LRDTSSLPPSLVPQACREGPLLPRAPGGVLPFTTWERCQFSSELNKARAHSMLGAQPK
VLVTSSCKASHHPPARAQGGPLASPSLGPPGGLSTPPSGIPCPPQCCQGHVALCRGLR
PSPGDRMTRLLEMPRCQRNSPGISERNYLVPL"
BASE COUNT 324 a 440 c 400 g 377 t
ORIGIN
1 gaagagctag ctttggagtg ttgtttttct cactctcagg caggggcctt agctggaatc
61 ctccaacctg ccactgaaca cgtcagtgct gtgtgctgcc tcttggacac ctgcccttga
121 aagcctcagg cccctgggag aagcactctg tccagtcctg tccccggggg ggaggcaggg
181 ccactgagcc ctcctcagat ggttagtggc ttccaacagc catcaggagt gtttcttgaa
241 tgccccaggt gtggaggact tggtctgtga ccacctagaa ccccagagct gaacaggaag
301 ccgtccctgc agcaacaaga gggctggaag ggggagctgc aggccaccct cggctctccc
361 actgctgggg cggtgatgtt cgggtgacat gtttgaaaaa tactcttaaa gataccaact
421 gttcccttat atggctaatg gtttgtgcag ccaccagcga tggcggcccc tattagagac
481 caggtttgtt aaaacaccaa atattgctgt ccacactaga cattaaccgg cttcagaaaa
541 gatggacacc ttttcccacg ctgtttcgct tcttaacttt ggtccagctt tagccaccac
601 acagcgtgtg agggactgct gctgcggagt cagcctcgtt tgtccctccg cctcccacca
661 gcacgcgccg cttctgagag acaccagctc cctgcctcca agcctggtgc cacaggcctg
721 tcgtgaggga cccctgcttc cgagagctcc tgggggggtt ctgcccttca ccacctggga
781 gaggtgtcag ttcagttccg agttgaacaa ggcccgtgca cacagcatgt tgggggccca
841 gcccaaagtt cttgtcacct cctcatgcaa agccagccat caccctccgg ccagagctca
901 aggtggcccc ttggccagcc cctccttggg tcctccagga ggactgagca cccctcctag
961 cggcatccct tgccctccac agtgctgcca ggggcacgtc gctctgtgcc gtggactgag
1021 accatcccct ggtgacagaa tgacccgttt gttggaaatg cctcgttgcc agagaaactc
1081 cccaggcatc tcggaacgaa actatttagt tccattgtga actggccacg ggacagcttt
1141 ttatcaactt attaagttgg agcactgtaa tcgcgcttgc tgagttagca gtggtggtaa
1201 gcgtgtgtta aacacataat gttacgtttt aggagagaga ggtcgtaagg aagtgtcgtg
1261 tcgctcatga ctctcttcta ttagttgggt aacagtggcc tcatgtttgt gtctgtgtgt
1321 acacagagcc cttaggttct gctctgtttc tttgccaggt gaatgtttgt ggcatgcgct
1381 gctgtccgcg cccctctgtc ctgcgcaggg ttcagctgtg cggcgccctg atttcctcca
1441 tgcacacaga acctccttgt gtctgtttct ctgttcctct gtggctgact caataaactt
1501 ttccctctga aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
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