LOCUS BC033221 2890 bp mRNA linear HUM 13-APR-2006
DEFINITION Homo sapiens hypothetical protein LOC643650, mRNA (cDNA clone
IMAGE:5019308), partial cds.
ACCESSION BC033221
VERSION BC033221.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2890)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2890)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 43 Row: j Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2890
/db_xref="H-InvDB:HIT000092988"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5019308"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_42"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2890
/gene="LOC643650"
/db_xref="GeneID:643650"
CDS <1..69
/gene="LOC643650"
/codon_start=1
/product="LOC643650 protein"
/protein_id="AAH33221.1"
/db_xref="GeneID:643650"
/translation="AGAGARGLAGEPDSPQQQWKPE"
BASE COUNT 714 a 789 c 681 g 706 t
ORIGIN
1 gcgggggcgg gcgcgcgggg ccttgccgga gaacctgact ctccgcagca gcagtggaag
61 ccggagtgac gcgttgtgtt gaacaccagt tttctggagc gctgtgtgtt cttaacagct
121 gagcagtctg tttctccaat caggtttcaa agccacttca actgcactgg cccctgtggg
181 tcactgctgc accgccctga cccatgtggg tccctgagga gcgacctgcc ggggccacct
241 ggctggacga aaaagacaca ccttggactt aagccgtgag aaaaaaactt catcagtaag
301 aagaatgaat aaacagacta ggttgaatcc atacaatgga atgttagcag acaataaaaa
361 gaaaatgaac tattgatgtc ccctactgca cagcagaagc tctgaatcgt gttcctgaat
421 gaaagaagtc agagatgaaa agatgggcca ggagtccagt ttctggaagg ccaagaatcg
481 aagtagcaag ctgcagccgt tttccagaca agcaggatgt ggggatgcag aagaattcag
541 gactggaggg gcaaactccg atgtgactga ggccccactg ccaaatggca gcatgctcag
601 atagcaccca ggaatttggg gaaaaaaact ggtgctcaca gctgcccagt taaggcacaa
661 gtctcccgcc tgctgcaggg cttgtgaggt gtatcagaac cttgaagaga tactctggga
721 agaaaggcct tcccagactg cctctccgca gcgctgtaag aatcagattt cttctatggg
781 ggacttccag gtctcttcag cattttctca gtcatcactg tatccctgcc actcagtgaa
841 ccacagcaac aactcccagc ttccagccga gaagcttgac cctgaagctg gcctcgattc
901 tctacagaag tgaggccaca gagcacaggt gaagggccac ttacctggta tcatctctgg
961 tctcagctct ggagaactag ctcctctgcc actgccacat cctgtccacc aagacctcct
1021 tgctgaaccc cacccccacc cggtgcctca ggaccctaac ttgtttgctg acctccatgt
1081 cctctcacca gatccagccc tggggagctg aacttcctct ggcccactgc cagctctgga
1141 tcagtccaca ccccagccag ccacagccca gccctgcctc tctctgtctc tctctcatgg
1201 ctgggttggc cttggccaat gctctctcta gagatcaaga cacaggcacc tctcttggtc
1261 tgttctggct gctgtgacaa aatgccttaa gctgggtggc ttataaacca cagaaattta
1321 tttctcactg ttctggaggc tgggaagtcc tacagactgg ggtactggcc tgcttgtttc
1381 ctcgtgaggg ctctcttcct gggttgcaga tggacatctc cctgatgtat cttcacatgg
1441 cagagagaga gagagagaga gacagaaaga cagagaaaga gagagagaga gagagagagc
1501 atgttctttg gtctcttctg gtaagggcct aatcccgtca tgaagaatcc ccataacttc
1561 aactaaatct aatcacttct caaaggctcc atctccacat accatcccat tgtgggttag
1621 ggtttcaaca taggaattct ggaggcacac aaacgtgcag ttcaaaacat gtggagacaa
1681 gggggcaagg actagagagc cctaccatcc tcgttcaaac ccttgaatca agcctgaagt
1741 caaagaactt cctttggaga gccccattcc atgagccgat aagttcccca ttttgccatc
1801 acccacttga gtttgggatt ttcccccagt tactgagtgc ctgactgaca tgatgccccc
1861 cacagatggg cctccctgcc cccaatctca cctcctctgt tagtttcctg gggttgccac
1921 aacaaagcgt tacaggcaga gcggctaaaa tgacagaaac ttatggtctc acagttctgg
1981 aggctgcaag ttcaaggtca aggtgtcagc agggttggtt ccttcggaag gctgtgcagg
2041 agcctgttgg gtgcctgtcc ctcagcttct agtggattac ttccatcttc agcatgcctt
2101 ggcttgtaga aggactaccc tgaactctgc cttcatggtc acaacacatc ctccctgtgt
2161 gtgtttctgt gtccaaattt ccccttctta taaggacacc agtcttatac ggacaatgct
2221 caatgtatga acctttgcca agggattgga ttagggaccc actatattcc agtatgacct
2281 catcttaact aattatacct gcaatgacac tgcttccaaa gaaggccaca tgatgaggta
2341 ccgttggtta ggaattcaat atatgagttt ggggggacac agttcagccc acaccacctc
2401 ctctgaccct gaattggatg ctgtttctgc tctgcttatg atcctcttgt cctcactggc
2461 ctcttggtcc agcacccact gaggcaccag ctctgagaga gctcactggc ttcacacagg
2521 tgcgacctga tggcgcctca cctcataccc caaacatcct tctcatctct gcaggacctg
2581 ctctgtttat gtccaggtat gttcagtgtt cctgtgtgtc cccagagtgt ggggaggtaa
2641 tgctccatgt acgaaccttt gccaagggaa tatggaaacc gatggatgag ttcttacctc
2701 ttttttcgtc cagacaaact gtcctaagat ggttttaaga gataccgagt aatcagctgc
2761 cagctcagta gcgcatcttc agattgactc tccctccttc cctgtctcct tccccatatt
2821 cttcatcttg ttccctggga tctttctccc taataaagga aaagctcata gaaaaaaaaa
2881 aaaaaaaaaa
//