LOCUS BC033213 1940 bp mRNA linear HUM 20-OCT-2005 DEFINITION Homo sapiens sterile alpha motif domain containing 11, mRNA (cDNA clone MGC:45873 IMAGE:5014368), complete cds. ACCESSION BC033213 VERSION BC033213.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1940) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1940) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 43 Row: i Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 22749012. FEATURES Location/Qualifiers source 1..1940 /db_xref="H-InvDB:HIT000041844" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:45873 IMAGE:5014368" /tissue_type="Brain, astrocytoma, grade IV" /clone_lib="NIH_MGC_98" /lab_host="DH10B" /note="Vector: pOTB7" gene 1..1940 /gene="SAMD11" /gene_synonym="MGC45873" /db_xref="GeneID:148398" /db_xref="HGNC:HGNC:28706" /db_xref="IMGT/GENE-DB:28706" /db_xref="MIM:28706" CDS 1..1491 /gene="SAMD11" /gene_synonym="MGC45873" /codon_start=1 /product="SAMD11 protein" /protein_id="AAH33213.1" /db_xref="GeneID:148398" /db_xref="HGNC:HGNC:28706" /db_xref="IMGT/GENE-DB:28706" /db_xref="MIM:28706" /translation="MAPEDHYRRLVSALSEASTFEDPQRLYHLGLPSHGEDPPWHDPP HHLPSHDLLRVRQEVAAAALRGPSGLEAHLPSSTAGQRRKQGLAQHREGAAPAAAPSF SERELPQPPPLLSPQNAPHVALGPHLRPPFLGVPSALCQTPGYGFLPPAQAEMFARQQ ELLRKQNLARLELPADLLRQKELESARPQLLAPETALRPNDGAEELQRRGALLVLNHG AAPLLALPPQGPPGSGPPTPSRDSARRAPRKGGPGPASARPSESKEMTGARLWAQDGS EDEPPKDSDGEDPETAAVGCRGPTPGQAPAGGAGAEGKGLFPGSTLPLGFPYAVSPYF HTGAVGGLSMDGEEAPAPEDVTKWTVDDVCSFVGGLSGCGEYTRVFREQGIDGETLPL LTEEHLLTNMGLKLGPALKIRAQVARRLGRVFYVASFPVALPLQPPTLRAPERELGTG EQPLSPTTATSPYGGGHALAGQTSPKQENGTLALLPGAPDPSQPLC" BASE COUNT 357 a 675 c 620 g 288 t ORIGIN 1 atggccccgg aggaccatta ccgccggctt gtgtcagcac tgagcgaggc cagcaccttt 61 gaggaccctc agcgcctcta ccacctgggc ctccccagcc acggtgagga cccaccctgg 121 catgatcccc ctcatcacct ccccagccac gatctcctga gggtccggca ggaggtggcg 181 gctgcagctc tgaggggccc cagtggcctg gaagcccacc tgccctcctc cacggcaggt 241 cagcgtcgga agcagggcct ggctcagcac cgggagggcg ccgccccagc tgccgccccg 301 tccttctcgg agagggagct gcctcagccg ccccccttgc tgtcgccgca gaatgcccct 361 cacgtcgccc tgggccccca tctcaggccc cccttcctgg gggtgccctc ggctctgtgc 421 cagaccccag gctacggctt cctgcccccc gcgcaggcgg agatgttcgc ccggcagcag 481 gagctcctgc ggaagcagaa cctggcccgg ctggagctgc ccgccgacct cctgcggcag 541 aaggagctgg agagcgcgcg cccacagctg ctggcgcccg agaccgccct gcgccccaac 601 gacggcgccg aggagctgca gcggcgcggg gccctgctgg tgctgaacca cggcgcggcg 661 ccactgctgg ccctgccccc ccaggggccc ccgggctccg gaccccccac cccgtcccgg 721 gactctgccc ggcgagcccc ccggaagggg ggtcccggcc ctgcctcagc gcggcccagc 781 gagtccaagg agatgacggg ggctaggctc tgggcacaag atggctcgga agacgagccc 841 cccaaagact cggacggaga ggaccccgag acggcagctg ttgggtgcag ggggcccact 901 ccgggccaag ctccagctgg aggggccggc gccgagggga aggggctttt cccagggtcc 961 acactgcccc tgggcttccc ttatgccgtc agcccctact tccacacagg cgcggtaggg 1021 ggactctcca tggatgggga ggaggcccca gcccctgagg acgtcaccaa gtggaccgtg 1081 gatgacgtct gcagcttcgt ggggggcctg tctggctgtg gagagtacac tcgggtcttc 1141 agggagcagg ggatcgacgg ggagaccctg ccactgctga cggaggagca cctgctgacc 1201 aacatggggc tgaagctggg gcccgccctc aagatccggg cccaggtggc caggcgcctg 1261 ggccgagttt tctacgtggc cagcttcccc gtggctctgc cactgcagcc accaaccctg 1321 cgggccccgg agcgagaact cggcacagga gagcagccct tgtcccccac gacggccacg 1381 tccccctatg gagggggcca cgcccttgcc ggtcaaactt cacccaagca ggagaatggg 1441 accttggctc tacttccagg ggcccccgac ccttcccagc ctctgtgttg aggttgccgg 1501 gggtaggggt ggggccacac aaatctccag gagccaccac tcaacacaat ggccctgcct 1561 cccaccgctt tatttctttc ggtttcggat gcaaaacaaa aaattttaaa agaaaatgtg 1621 acttcaaagg aaaagaacaa atttccaaag acttggggga gtgaaggcag agcctggtgc 1681 agatggacga ggtctgcaga cggagggcag aggtggtgga aggggccagg ggcctgcagg 1741 cctccccctg gaactgggac tggtctcggt ctgctgacgt cagggtcagc tcccccgcgg 1801 agctgacttc agcagcccac agctgtgggg cttcagcagc cacaccagcc cagcccagcc 1861 cagctctcga tacgtttggt ctttcatgct gaaaaataaa taataaagcc tgtcccgtga 1921 aaaaaaaaaa aaaaaaaaaa //