LOCUS BC033213 1940 bp mRNA linear HUM 20-OCT-2005
DEFINITION Homo sapiens sterile alpha motif domain containing 11, mRNA (cDNA
clone MGC:45873 IMAGE:5014368), complete cds.
ACCESSION BC033213
VERSION BC033213.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1940)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1940)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 43 Row: i Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22749012.
FEATURES Location/Qualifiers
source 1..1940
/db_xref="H-InvDB:HIT000041844"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45873 IMAGE:5014368"
/tissue_type="Brain, astrocytoma, grade IV"
/clone_lib="NIH_MGC_98"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..1940
/gene="SAMD11"
/gene_synonym="MGC45873"
/db_xref="GeneID:148398"
/db_xref="HGNC:HGNC:28706"
/db_xref="IMGT/GENE-DB:28706"
/db_xref="MIM:28706"
CDS 1..1491
/gene="SAMD11"
/gene_synonym="MGC45873"
/codon_start=1
/product="SAMD11 protein"
/protein_id="AAH33213.1"
/db_xref="GeneID:148398"
/db_xref="HGNC:HGNC:28706"
/db_xref="IMGT/GENE-DB:28706"
/db_xref="MIM:28706"
/translation="MAPEDHYRRLVSALSEASTFEDPQRLYHLGLPSHGEDPPWHDPP
HHLPSHDLLRVRQEVAAAALRGPSGLEAHLPSSTAGQRRKQGLAQHREGAAPAAAPSF
SERELPQPPPLLSPQNAPHVALGPHLRPPFLGVPSALCQTPGYGFLPPAQAEMFARQQ
ELLRKQNLARLELPADLLRQKELESARPQLLAPETALRPNDGAEELQRRGALLVLNHG
AAPLLALPPQGPPGSGPPTPSRDSARRAPRKGGPGPASARPSESKEMTGARLWAQDGS
EDEPPKDSDGEDPETAAVGCRGPTPGQAPAGGAGAEGKGLFPGSTLPLGFPYAVSPYF
HTGAVGGLSMDGEEAPAPEDVTKWTVDDVCSFVGGLSGCGEYTRVFREQGIDGETLPL
LTEEHLLTNMGLKLGPALKIRAQVARRLGRVFYVASFPVALPLQPPTLRAPERELGTG
EQPLSPTTATSPYGGGHALAGQTSPKQENGTLALLPGAPDPSQPLC"
BASE COUNT 357 a 675 c 620 g 288 t
ORIGIN
1 atggccccgg aggaccatta ccgccggctt gtgtcagcac tgagcgaggc cagcaccttt
61 gaggaccctc agcgcctcta ccacctgggc ctccccagcc acggtgagga cccaccctgg
121 catgatcccc ctcatcacct ccccagccac gatctcctga gggtccggca ggaggtggcg
181 gctgcagctc tgaggggccc cagtggcctg gaagcccacc tgccctcctc cacggcaggt
241 cagcgtcgga agcagggcct ggctcagcac cgggagggcg ccgccccagc tgccgccccg
301 tccttctcgg agagggagct gcctcagccg ccccccttgc tgtcgccgca gaatgcccct
361 cacgtcgccc tgggccccca tctcaggccc cccttcctgg gggtgccctc ggctctgtgc
421 cagaccccag gctacggctt cctgcccccc gcgcaggcgg agatgttcgc ccggcagcag
481 gagctcctgc ggaagcagaa cctggcccgg ctggagctgc ccgccgacct cctgcggcag
541 aaggagctgg agagcgcgcg cccacagctg ctggcgcccg agaccgccct gcgccccaac
601 gacggcgccg aggagctgca gcggcgcggg gccctgctgg tgctgaacca cggcgcggcg
661 ccactgctgg ccctgccccc ccaggggccc ccgggctccg gaccccccac cccgtcccgg
721 gactctgccc ggcgagcccc ccggaagggg ggtcccggcc ctgcctcagc gcggcccagc
781 gagtccaagg agatgacggg ggctaggctc tgggcacaag atggctcgga agacgagccc
841 cccaaagact cggacggaga ggaccccgag acggcagctg ttgggtgcag ggggcccact
901 ccgggccaag ctccagctgg aggggccggc gccgagggga aggggctttt cccagggtcc
961 acactgcccc tgggcttccc ttatgccgtc agcccctact tccacacagg cgcggtaggg
1021 ggactctcca tggatgggga ggaggcccca gcccctgagg acgtcaccaa gtggaccgtg
1081 gatgacgtct gcagcttcgt ggggggcctg tctggctgtg gagagtacac tcgggtcttc
1141 agggagcagg ggatcgacgg ggagaccctg ccactgctga cggaggagca cctgctgacc
1201 aacatggggc tgaagctggg gcccgccctc aagatccggg cccaggtggc caggcgcctg
1261 ggccgagttt tctacgtggc cagcttcccc gtggctctgc cactgcagcc accaaccctg
1321 cgggccccgg agcgagaact cggcacagga gagcagccct tgtcccccac gacggccacg
1381 tccccctatg gagggggcca cgcccttgcc ggtcaaactt cacccaagca ggagaatggg
1441 accttggctc tacttccagg ggcccccgac ccttcccagc ctctgtgttg aggttgccgg
1501 gggtaggggt ggggccacac aaatctccag gagccaccac tcaacacaat ggccctgcct
1561 cccaccgctt tatttctttc ggtttcggat gcaaaacaaa aaattttaaa agaaaatgtg
1621 acttcaaagg aaaagaacaa atttccaaag acttggggga gtgaaggcag agcctggtgc
1681 agatggacga ggtctgcaga cggagggcag aggtggtgga aggggccagg ggcctgcagg
1741 cctccccctg gaactgggac tggtctcggt ctgctgacgt cagggtcagc tcccccgcgg
1801 agctgacttc agcagcccac agctgtgggg cttcagcagc cacaccagcc cagcccagcc
1861 cagctctcga tacgtttggt ctttcatgct gaaaaataaa taataaagcc tgtcccgtga
1921 aaaaaaaaaa aaaaaaaaaa
//