LOCUS BC033212 3299 bp mRNA linear HUM 16-FEB-2007
DEFINITION Homo sapiens actin filament associated protein 1-like 2, mRNA (cDNA
clone MGC:45872 IMAGE:4909140), complete cds.
ACCESSION BC033212
VERSION BC033212.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3299)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3299)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 43 Row: i Column: 16.
FEATURES Location/Qualifiers
source 1..3299
/db_xref="H-InvDB:HIT000041843"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45872 IMAGE:4909140"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_42"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3299
/gene="AFAP1L2"
/gene_synonym="XB130"
/db_xref="GeneID:84632"
/db_xref="HGNC:HGNC:25901"
CDS 31..2487
/gene="AFAP1L2"
/gene_synonym="XB130"
/codon_start=1
/product="actin filament associated protein 1-like 2"
/protein_id="AAH33212.1"
/db_xref="GeneID:84632"
/db_xref="HGNC:HGNC:25901"
/translation="MERYKALEQLLTELDDFLKILDQENLSSTALVKKSCLAELLRLY
TKSSSSDEEYIYMNKVTINKQQNAESQGKAPEEQGLLPNGEPSQHSSAPQKSLPDLPP
PKMIPERKQLAIPKTESPEGYYEEAEPYDTSLNEDGEAVSSSYESYDEEDGSKGKSAP
YQWPSPEAGIELMRDARICAFLWRKKWLGQWAKQLCVIKDNRLLCYKSSKDHSPQLDV
NLLGSSVIHKEKQVRKKEHKLKITPMNADVIVLGLQSKDQAEQWLRVIQEVSGLPSEG
ASEGNQYTPDAQRFNCQKPDIAEKYLSASEYGSSVDGHPEVPETKDVKKKCSAGLKLS
NLMNLGRKKSTSLEPVERSLETSSYLNVLVNSQWKSRWCSVRDNHLHFYQDRNRSKVA
QQPLSLVGCEVVPDPSPDHLYSFRILHKGEELAKLEAKSSEEMGHWLGLLLSESGSKT
DPEEFTYDYVDADRVSCIVSAAKNSLLLMQRKFSEPNTYIDGLPSQDRQEELYDDVDL
SELTAAVEPTEEATPVADDPNERESDRVYLDLTPVKSFLHGPSSAQAQASSPTLSCLD
NATEALPADSGPGPTPDEPCIKCPENLGEQQLESLEPEDPSLRITTVKIQTEQQRISF
PPSCPDAVVATPPGASPPVKDRLRVTSAEIKLGKNRTEAEVKRYTEEKERLEKKKEEI
RGHLAQLRKEKRELKETLLKCTDKEVLASLEQKLKEIDEECRGEESRRVDLELSIMEV
KDNLKKAEAGPVTLGTTVDTTHLENVSPRPKAVTPASAPDCTPVNSATTLKNRPLSVV
VTGKGTVLQKAKEWEKKGAS"
BASE COUNT 926 a 856 c 880 g 637 t
ORIGIN
1 gagccgcgag gagcgcactc cgtggccccg atggagcggt acaaagccct ggaacagctg
61 ctgacagagt tggatgactt cctcaagatt cttgaccagg agaacctgag cagcacagca
121 ctggtgaaga agagctgcct ggcggagctc ctccggcttt acaccaaaag cagcagctct
181 gatgaggagt acatttatat gaacaaagtg accatcaaca agcaacagaa tgcagagtct
241 caaggcaaag cgcctgagga gcagggcctg ctacccaatg gggagcccag ccagcactcc
301 tcggcccctc agaagagcct tccagacctc ccgccaccca agatgattcc agaacggaaa
361 cagcttgcca tcccaaagac ggagtctcca gagggctact atgaagaggc tgagccatat
421 gacacatccc tcaatgagga cggagaggct gtgagcagct cctacgagtc ctacgatgaa
481 gaggacggca gcaagggcaa gtcggcccct taccagtggc cctcgccgga ggccggcatc
541 gagctgatgc gtgacgcccg catctgcgcc ttcctgtggc gcaagaagtg gctgggacag
601 tgggccaagc agctctgtgt catcaaggac aacaggcttc tgtgctacaa atcctccaag
661 gaccacagcc ctcagctgga cgtgaaccta ctgggcagca gcgtcattca caaggagaag
721 caagtgcgga agaaggagca caagctgaag atcacaccga tgaatgccga tgtgattgtg
781 ctgggcctgc agagcaagga ccaggctgag cagtggctca gggtcatcca ggaagtgagc
841 ggcctgcctt ccgaaggagc atctgaagga aaccagtaca ccccggatgc ccagcgcttt
901 aactgccaga aaccagatat agctgagaag tacctgtcgg cttcagagta tgggagctcc
961 gtggatggcc accctgaggt cccagaaacc aaagacgtca agaagaaatg ttctgctggc
1021 ctcaaactga gcaacctaat gaatctgggc aggaagaaat ccacctcact ggagcctgtg
1081 gagaggtccc tcgagacatc cagttacctg aacgtgctgg tgaacagcca gtggaagtct
1141 cgctggtgct ctgtcaggga caatcacctg cacttctacc aggaccggaa ccggagcaag
1201 gtggcccagc aacccctcag cctggtgggc tgcgaggtgg tcccagaccc cagccccgac
1261 cacctctact ccttccgcat cctccacaag ggcgaggagc tggccaagct tgaggccaag
1321 tcttccgagg aaatgggcca ctggctgggt ctcctgctct ctgagtcagg ctccaagaca
1381 gacccagaag agttcaccta cgactatgtg gatgccgata gggtctcctg tattgtgagt
1441 gcggccaaaa actctctctt actgatgcag agaaagttct cagagcccaa cacttacatc
1501 gatggcctgc ctagccagga ccgccaggag gagctgtatg acgacgtgga cctgtcagag
1561 ctcacagctg cggtggagcc taccgaggaa gccacccctg ttgcagatga cccaaatgag
1621 agagaatctg accgggtgta cctggacctc acacctgtca agtcctttct gcatggcccc
1681 agcagtgcac aggcccaggc ctcctccccg acgttgtcct gcctggacaa tgcaactgag
1741 gccctcccgg cagactcagg cccaggtccc accccagatg agccctgcat aaagtgtcca
1801 gagaacctgg gagaacagca gctggagagt ttggagccag aggatccttc cctgagaatc
1861 accaccgtca aaatccagac ggaacagcag agaatctcct tcccaccgag ctgcccggat
1921 gccgtggtgg ccaccccacc tggtgccagc ccacctgtga aggacaggtt gcgcgtgacc
1981 agtgcagaga tcaagcttgg caagaatcgg acagaagctg aggtgaagcg gtacacagag
2041 gagaaggaga ggcttgaaaa gaagaaggaa gaaatccggg ggcacctggc tcagctccgg
2101 aaagagaaac gggagctaaa ggaaacccta ctgaaatgca cagacaagga agtcctggcg
2161 agcctggagc agaagctgaa ggaaattgac gaggagtgcc ggggcgagga gagcaggcgc
2221 gtggacctgg agctcagcat catggaggtg aaggacaacc tgaagaaggc tgaggcaggg
2281 cctgtgacgt taggcaccac cgtggacacc acccacctgg agaatgtgag cccccgcccc
2341 aaagctgtca cacctgcctc tgccccagac tgtaccccag tcaactctgc aaccacactc
2401 aagaacaggc ctctctcggt cgtggtcaca ggcaaaggca ctgtactcca gaaagccaag
2461 gaatgggaga agaaaggagc aagttagaaa acaagcttca tctaaagact ctcatgtcaa
2521 tgtggacctt ggtgacaatc ctgctttgtt aaagcaaaaa ctatgcgaaa gggtgagtct
2581 gtttagaaga aaaagcaaag actgaggtac tgtgaatgga gagcttcagc taagaggagg
2641 ctctgtccct tttcagagcc aaaggaaata atacaacaaa aaggaggctt ctttggagac
2701 ctaagtctat tggatgtaaa caagacgttg tatttaggga tgttctgtgt ttctttcttt
2761 tttgaagttg tcatcaattg ctttactaag atttttaaat agtgaaaacc tcctgtttag
2821 actttggtgg aagatgaatc aaggaagcag ggccctgtct tatgggtcac atgtctttgg
2881 tgagtgagaa gacctaaact cctggccatc atctcttatc caatacttag cagttgggga
2941 ttaaaccatc cttgccttca gttctctcca atattaccag gcccaactca gtcttcagtg
3001 attttaaaca gcattgacat catctgtaaa accatcatct gtaaaaccat ctatgacatg
3061 agttttgaga aacaataatg gggaaaatat ttgggaccaa gctgaagcac taatcccact
3121 aagttaaaga cttctttcca gtccaaggca ggcctgaatc aactgtcttt aaataaaatt
3181 ttaagtgatg ctgtattata tataggaaaa aatgcttaaa atcctgtcat ttagaacagt
3241 gaaaagtatc ttttgagatt aaagtgactc tttactgtag gaaaaaaaaa aaaaaaaaa
//