LOCUS BC033210 2191 bp mRNA linear HUM 04-AUG-2008 DEFINITION Homo sapiens nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, mRNA (cDNA clone IMAGE:4906270), partial cds. ACCESSION BC033210 VERSION BC033210.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2191) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2191) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 43 Row: i Column: 10. FEATURES Location/Qualifiers source 1..2191 /db_xref="H-InvDB:HIT000092982" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4906270" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..2191 /gene="NFKB1" /gene_synonym="EBP-1" /gene_synonym="KBF1" /gene_synonym="NF-kappa-B" /gene_synonym="NFKB-p105" /gene_synonym="NFKB-p50" /gene_synonym="p105" /db_xref="GeneID:4790" /db_xref="HGNC:HGNC:7794" /db_xref="MIM:164011" CDS <1..1655 /gene="NFKB1" /gene_synonym="EBP-1" /gene_synonym="KBF1" /gene_synonym="NF-kappa-B" /gene_synonym="NFKB-p105" /gene_synonym="NFKB-p50" /gene_synonym="p105" /codon_start=3 /product="NFKB1 protein" /protein_id="AAH33210.1" /db_xref="GeneID:4790" /db_xref="HGNC:HGNC:7794" /db_xref="MIM:164011" /translation="FHPGTTKSNAGMKHGTMDTESKKDPEGCDKSDDKNTVNLFGKVI ETTEQDQEPSEATVGNGEVTLTYATGTKEESAGVQDNLFLEKAMQLAKRHANALFDYA VTGDVKMLLAVQRHLTAVQDENGDSVLHLAIIHLHSQLVRDLLEVTSGLISDDIINMR NDLYQTPLHLAVITKQEDVVEDLLRAGADLSLLDRLGNSVLHLAAKEGHDKVLSILLK HKKAALLLDHPNGDGLNAIHLAMMSNSLPCLLLLVAAGADVNAQEQKSGRTALHLAVE HDNISLAGCLLLEGDAHVDSTTYDGTTPLHIAAGRGSTRLAALLKAAGADPLVENFEP LYDLDDSWENAGEDEGVVPGTTPLDMATSWQVFDILNGKPYEPEFTSDDLLAQGDMKQ LAEDVKLQLYKLLEIPDPDKNWATLAQKLGLGILNNAFRLSPAPSKTLMDNYEVSGGT VRELVEALRQMGYTEAIEVIQAASSPVKTTSQAHSLPLSPASTRQQIDELRDSDSVCD SGVETSFRKLSFTESLTSGASLLTLNKMPHDYGQEGPLEGKI" BASE COUNT 613 a 521 c 535 g 522 t ORIGIN 1 ctttccatcc tggaactact aaatctaatg ctgggatgaa gcatggaacc atggacactg 61 aatctaaaaa ggaccctgaa ggttgtgaca aaagtgatga caaaaacact gtaaacctct 121 ttgggaaagt tattgaaacc acagagcaag atcaggagcc cagcgaggcc accgttggga 181 atggtgaggt cactctaacg tatgcaacag gaacaaaaga agagagtgct ggagttcagg 241 ataacctctt tctagagaag gctatgcagc ttgcaaagag gcatgccaat gcccttttcg 301 actacgcggt gacaggagac gtgaagatgc tgctggccgt ccagcgccat ctcactgctg 361 tgcaggatga gaatggggac agtgtcttac acttagcaat catccacctt cattctcaac 421 ttgtgaggga tctactagaa gtcacatctg gtttgatttc tgatgacatt atcaacatga 481 gaaatgatct gtaccagacg cccttgcact tggcagtgat cactaagcag gaagatgtgg 541 tggaggattt gctgagggct ggggccgacc tgagccttct ggaccgcttg ggtaactctg 601 ttttgcacct agctgccaaa gaaggacatg ataaagttct cagtatctta ctcaagcaca 661 aaaaggcagc actacttctt gaccacccca acggggacgg tctgaatgcc attcatctag 721 ccatgatgag caatagcctg ccatgtttgc tgctgctggt ggccgctggg gctgacgtca 781 atgctcagga gcagaagtcc gggcgcacag cactgcacct ggctgtggag cacgacaaca 841 tctcattggc aggctgcctg ctcctggagg gtgatgccca tgtggacagt actacctacg 901 atggaaccac acccctgcat atagcagctg ggagagggtc caccaggctg gcagctcttc 961 tcaaagcagc aggagcagat cccctggtgg agaactttga gcctctctat gacctggatg 1021 actcttggga aaatgcagga gaggatgaag gagttgtgcc tggaaccacg cctctagata 1081 tggccaccag ctggcaggta tttgacatat taaatgggaa accatatgag ccagagttta 1141 catctgatga tttactagca caaggagaca tgaaacagct ggctgaagat gtgaagctgc 1201 agctgtataa gttactagaa attcctgatc cagacaaaaa ctgggctact ctggcgcaga 1261 aattaggtct ggggatactt aataatgcct tccggctgag tcctgctcct tccaaaacac 1321 ttatggacaa ctatgaggtc tctgggggta cagtcagaga gctggtggag gccctgagac 1381 aaatgggcta caccgaagca attgaagtga tccaggcagc ctccagccca gtgaagacca 1441 cctctcaggc ccactcgctg cctctctcgc ctgcctccac aaggcagcaa atagacgagc 1501 tccgagacag tgacagtgtc tgcgacagcg gcgtggagac atccttccgc aaactcagct 1561 ttaccgagtc tctgaccagt ggtgcctcac tgctaactct caacaaaatg ccccatgatt 1621 atgggcagga aggacctcta gaaggcaaaa tttagcctgc tgacaatttc ccacaccgtg 1681 taaaccaaag ccctaaaatt ccactgcgtt gtccacaaga cagaagctga agtgcatcca 1741 aaggtgctca gagagccggc ccgcctgaat cattctcgat ttaactcgag accttttcaa 1801 cttggcttcc tttcttggtt cataaatgaa ttttagtttg gttcacttac agatagtatc 1861 tagcaatcac aacactggct gagcggatgc atctggggat gaggttgctt actaagcttt 1921 gccagctgct gctggatcac agctgctttc tgttgtcatt gctgttgtcc ctctgctacg 1981 ttcctattgt cattaaaggt atcacggtcg ccacctggca ttccttctga ccacagcatc 2041 attttgcatt caaattaagg gttaagaaaa gagatatttt aaaatgagag tcacttgatg 2101 tgccatttta aaaaaaaaag gcatattgct ttttctaatg tggttatttc tctgatttgc 2161 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a //