LOCUS BC033196 1456 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens EF-hand calcium binding domain 4A, mRNA (cDNA clone
MGC:45840 IMAGE:4849453), complete cds.
ACCESSION BC033196
VERSION BC033196.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1456)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1456)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Daniel McVicar, DBS/NCI
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 43 Row: g Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 57527761.
FEATURES Location/Qualifiers
source 1..1456
/db_xref="H-InvDB:HIT000041836"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45840 IMAGE:4849453"
/tissue_type="Blood, natural killer cell"
/clone_lib="NIH_MGC_106"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1456
/gene="EFCAB4A"
/gene_synonym="MGC45840"
/db_xref="GeneID:283229"
/db_xref="HGNC:HGNC:28703"
CDS 130..1014
/gene="EFCAB4A"
/gene_synonym="MGC45840"
/codon_start=1
/product="EF-hand calcium binding domain 4A"
/protein_id="AAH33196.1"
/db_xref="GeneID:283229"
/db_xref="HGNC:HGNC:28703"
/translation="MASPGKPGADEAQEEEGELEGGSAGPRAAILEQAEELFLLCDKE
AKGFITKHDLQGLQSDLPLTPEQLEAVFESLDQAHTGFLTAREFCLGLGMFVGVASAQ
GANPCRTPEETFESGGLDVQGTAGSLDEEEEEEERFHTVLEQLGVAPVLGEQRAVRTL
WARLQRERPELLGSFEDVLIRASACLEEAARERDGLEQALRRRESEHEREVRALYEET
EQLREQSRRPPSQNFARGERRSRLELELQIREQDLERAGLRQRERRGRRLQEHAERES
QPATATGAAQGAEYTAAG"
BASE COUNT 274 a 440 c 515 g 227 t
ORIGIN
1 ctgctgcagg gagggccctc ggctgagcct tcagacacac ttgcacccca tccgctcccc
61 tcctgaattt cttctgaccc tcccttggct tcacagcacc tgaaggccag gctgaggccc
121 cctgctctca tggccagccc tggaaagcct ggggctgatg aggcccagga ggaggagggg
181 gaactcgagg ggggctctgc agggccgcgg gctgcaatac tggagcaggc tgaggagctg
241 tttctgctgt gtgacaagga ggctaagggc ttcatcacca agcacgacct gcagggtctc
301 cagagcgacc tgcccctcac gccagagcag ctggaggctg tgtttgaaag tctggaccag
361 gctcacactg gcttcctcac cgccagggag ttctgcctgg gcctggggat gtttgtgggg
421 gtggcgtcag cccagggagc gaacccctgc aggactcccg aggagacctt tgagtcgggc
481 gggctcgacg tgcagggcac ggcgggctct ctggatgagg aggaggaaga ggaggagcga
541 ttccacactg tgctggagca gctgggggtg gccccggtcc tgggcgagca gcgggctgtg
601 aggacgctct gggccaggct gcagcgcgag cgccccgagc tgctgggctc tttcgaggat
661 gttctgatac gcgcgtcggc ctgcctggag gaggcggccc gggagcgcga cggcctggag
721 caggcgctgc ggaggcgcga gagcgagcac gagagggagg tgcgcgctct gtacgaggag
781 acggagcagc ttcgggagca gagccggcgc ccgccgagtc agaacttcgc ccgcggggag
841 cggagaagcc gtctggagct ggagctgcag atccgcgagc aggacctgga acgcgcgggc
901 ctgcggcagc gggagagacg tggtcgccgt ctccaggaac atgcagaaag agaaagtcag
961 cctgctacgg caactggagc tgctcaggga gctgaataca cggctgcggg atgacaggga
1021 cgcctgcgag gccaggcggg cgggcagcag ctgcaggaag gctctgacaa cagcccgcct
1081 gcctgggccc acctgctgct gctgctgttg ctgggctcgg ccccccagac gcggctctgg
1141 ccaccttccc agtgcccggt gaccagcccc gagtgactca cggaccatga gctagaagct
1201 gcccttgcag gaggcttgtc atgggtcggg ggtgcccact caggatgcag gctctcccca
1261 gggggcccca ggctcgcctg actgaagaca tgaaggacct agcctaggag tggtcagggt
1321 cccgggagtg gccagggtcc cgtgtgtgcc ctctgccagt cttcgctctg tccccgttca
1381 atcaacccca tctcagttca gcagaaaacc ccctcgtcaa ataaaaccca ctgactgcaa
1441 aaaaaaaaaa aaaaaa
//