LOCUS BC033182 1494 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens transmembrane and ubiquitin-like domain containing 1,
mRNA (cDNA clone MGC:45820 IMAGE:4586932), complete cds.
ACCESSION BC033182
VERSION BC033182.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1494)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1494)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 43 Row: f Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543199.
FEATURES Location/Qualifiers
source 1..1494
/db_xref="H-InvDB:HIT000041831"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45820 IMAGE:4586932"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1494
/gene="TMUB1"
/gene_synonym="MGC5442"
/gene_synonym="SB144"
/db_xref="GeneID:83590"
/db_xref="HGNC:HGNC:21709"
CDS 269..1009
/gene="TMUB1"
/gene_synonym="MGC5442"
/gene_synonym="SB144"
/codon_start=1
/product="transmembrane and ubiquitin-like domain
containing 1"
/protein_id="AAH33182.1"
/db_xref="GeneID:83590"
/db_xref="HGNC:HGNC:21709"
/translation="MTLIEGVGDEVTVLFSVLACLLVLALAWVSTHTAEGGDPLPQPS
GTPTPSQPSAAMAATDSMRGEAPGAETPSLRHRGQAAQPEPSTGFTATPPAPDSPQEP
LVLRLKFLNDSEQVARAWPHDTIGSLKRTQFPGREQQVRLIYQGQLLGDDTQTLGSLH
LPPNCVLHCHVSTRVGPPNPPCPPGSEPGPSGLEIGSLLLPLLLLLLLLLWYCQIQYR
PFFPLTATLGLAGFTLLLSLLAFAMYRP"
BASE COUNT 256 a 494 c 490 g 254 t
ORIGIN
1 gcggagtaga tgagcctggg gtgaagtcgg tgaaggagta gacacactgg ggtgaagtgg
61 gcaggagaat agatacgctt gggggtgaag tttggttggg gtgaagttta ggagaggcgt
121 tgcttaggcc cttaccttgg gatagggttt gggtgagttg ggagctggtt gaagacctcg
181 agctcagatg acagaaagtt aggacttggg attcggcgat gggaaggggc acccggagct
241 cggtagcgcg gcgggcaagg caggcgccat gaccctgatt gaaggggtgg gtgatgaggt
301 gaccgtcctt ttctcggtgc ttgcctgcct tctggtgctg gcccttgcct gggtctcaac
361 gcacaccgct gagggcgggg acccactgcc ccagccgtca gggaccccaa cgccatccca
421 gcccagcgca gccatggcag ctaccgacag catgagaggg gaggccccag gggcagagac
481 ccccagcctg agacacagag gtcaagctgc acagccagag cccagcacgg ggttcacagc
541 aacaccgcca gccccggact ccccgcagga gcccctcgtg ctacggctga aattcctcaa
601 tgattcagag caggtggcca gggcctggcc ccacgacacc attggctcct tgaaaaggac
661 ccagtttccc ggccgggaac agcaggtgcg actcatctac caagggcagc tgctaggcga
721 cgacacccag accctgggca gccttcacct ccctcccaac tgcgttctcc actgccacgt
781 gtccacgaga gtcggtcccc caaatccccc ctgcccgccg gggtccgagc ccggcccctc
841 cgggctggaa atcggcagcc tgctgctgcc cctgctgctc ctgctgttgc tgctgctctg
901 gtactgccag atccagtacc ggcccttctt tcccctgacc gccactctgg gcctggccgg
961 cttcaccctg ctcctcagtc tcctggcctt tgccatgtac cgcccgtagt gcctccgcgg
1021 gcgcttggca gcgtcgccgg cccctccgga ccttgctccc cgcgccgcgg cgggagctgc
1081 tgcctgccca ggcccgcctc tccggcctgc ctcttcccgc tgccctggag cccagccctg
1141 cgccgcagag gactcccggg actggcggag gccccgccct gcgaccgccg gggctcgggg
1201 ccacctcccg gggctgctga ccctcagccc gcactgggag tgggctcctc ggggtcgggc
1261 atctgctgtc gctgcctcgg ccccgggcag agccgggccg ccccgggggc ccgtcttagt
1321 gttctgccgg aggacccagc cgcctccaat ccctgacagc tccttgggct gagttgggga
1381 cgccaggtcg gtgggaggct ggtgaagggg agcggggagg ggcagaggag ttccccggaa
1441 cccgtgcaga ttaaagtaac tgtgaagttt tcaaaaaaaa aaaaaaaaaa aaaa
//