LOCUS BC033167 1430 bp mRNA linear HUM 07-OCT-2003 DEFINITION Homo sapiens calcium binding protein 4, mRNA (cDNA clone MGC:45795 IMAGE:4549347), complete cds. ACCESSION BC033167 VERSION BC033167.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1430) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1430) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (25-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP/Gazdar cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield, Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin, Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott, Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy, George Yang, Scott Zuyderduyn, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 43 Row: e Column: 5. FEATURES Location/Qualifiers source 1..1430 /db_xref="H-InvDB:HIT000041822" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:45795 IMAGE:4549347" /tissue_type="Lung, large cell carcinoma" /clone_lib="NIH_MGC_18" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1430 /gene="CABP4" /db_xref="GeneID:57010" CDS 345..857 /gene="CABP4" /codon_start=1 /product="CABP4 protein" /protein_id="AAH33167.1" /db_xref="GeneID:57010" /translation="MTEPWLALGTSWTLPLQDRELGPEELDELQAAFEEFDTDRDGYI SHRELGDCMRTLGYMPTEMELLEVSQHIKMRMGGRVDFEEFVELIGPKLREETAHMLG VRELRIAFREFDRDRDGRITVAELREAVPALLGEPLAGPELDEMLREVDLNGDGTVDF DEFVMMLSRH" misc_feature 390..851 /gene="CABP4" /note="FRQ1; Region: COG5126, FRQ1, Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]" /db_xref="CDD:COG5126" BASE COUNT 329 a 411 c 437 g 253 t ORIGIN 1 aggcagctgt ccccagcggc cagtgtcccc catgccggat ctctaggatc tggaaggccg 61 ctgctgccag gaacaagaag tcagagaggg ccaggctgag caggagcagc gccagacgcg 121 tgccagctcc atgccgggcc tgggagccgg ccagccacgc catcaaccca ttggctggca 181 gcccaaggag cagcagggcc accaggaaga ccgtgtccca gccaccttgg ggtcccaccg 241 acatcgtcct gactccctgc acgacgctgc tcagaggaca tacgggcccc tgctcaatcg 301 agtcttcggg aaggccaaca tgagcagggg atgaaggagg aaggatgaca gagccgtggc 361 tggccctggg gacatcctgg actctccccc tgcaggaccg cgaactgggc cccgaggagc 421 tagacgagct tcaggccgcc ttcgaggagt ttgacactga ccgtgacggc tacatcagcc 481 accgggagct gggtgactgc atgcggaccc tgggctacat gcccaccgag atggagctcc 541 tggaggtctc gcagcacatc aagatgcgca tgggcggccg tgtggacttt gaggagtttg 601 tagaactgat aggcccaaag ctgagggagg agacggcgca catgctgggg gtgcgagagc 661 tgcgcatcgc cttccgagag tttgacaggg acagggatgg acgaattacg gtggcggagc 721 tgcgggaggc ggtaccggct ctgctcgggg agccgctggc gggtcctgag ctggacgaga 781 tgctccgaga agtggacctc aatggggatg gcaccgtaga ctttgacgag tttgtgatga 841 tgctctcccg ccactgaggc tccaggaggg aatatctgtt gcccctgcgg ccccagacac 901 cagccagacc caggctgcag gcctccccca ggagcctcca ggatggagat ggagacccag 961 cagcccccag actacttcta tccctgaaaa cacctggcct caatgttggc ttgttatgtt 1021 acctgcccac cctcatcctt acctcctcct actcaagctg cctggagaag acctgctctc 1081 agctgcccac cgttcctcag tgtgagcaag atttgggtct ctccagacct ctgggaggta 1141 gggagttccc tggcactggc agcattcagt ggggaccccc cagtggcatg atgaatggag 1201 aggatggctg gaccccttcc actacttatg tttataattt tttttttttt taatgaactt 1261 gagccgggtg cagtggctca cacctgtaag cccagctgtc agggggcaga agcgggagga 1321 tagcttgagc ccaggagtgc aagacctgcc tgggcaatat actgagaccc cattctccac 1381 aaaaaggaaa aataaaagac aaaaaaacaa acaaaaaaaa aaaaaaaaaa //