LOCUS BC033166 3159 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ring finger protein 185, mRNA (cDNA clone MGC:45794
IMAGE:4549320), complete cds.
ACCESSION BC033166
VERSION BC033166.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3159)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3159)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 43 Row: e Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31542782.
FEATURES Location/Qualifiers
source 1..3159
/db_xref="H-InvDB:HIT000259051"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45794 IMAGE:4549320"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_18"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3159
/gene="RNF185"
/gene_synonym="FLJ38628"
/db_xref="GeneID:91445"
/db_xref="HGNC:HGNC:26783"
CDS 136..714
/gene="RNF185"
/gene_synonym="FLJ38628"
/codon_start=1
/product="ring finger protein 185"
/protein_id="AAH33166.1"
/db_xref="GeneID:91445"
/db_xref="HGNC:HGNC:26783"
/translation="MASKGPSASASPENSSAGGPSGSSNGAGESGGQDSTFECNICLD
TAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDP
REKTPPRPQGQRPEPENRGGFQGFGFGDGGFQMSFGIGAFPFGIFATAFNINDGRPPP
AVPGTPQYVDEQFLSRLFLFVALVIMFWLLIA"
BASE COUNT 783 a 796 c 766 g 814 t
ORIGIN
1 cttacccaac agattgacgc ggcgttagta ttggccgtgt acccgaaaaa ctgattgact
61 gggctggcgt taactgtgcg gaggcaggat ttccctgggg aaagtcttca ctcagagctt
121 cgctgacagc caaggatggc aagcaagggg ccctcggcct ctgcatctcc tgagaactcc
181 agtgcagggg ggcccagtgg gagcagcaat ggcgctggcg agagcggagg gcaggacagc
241 actttcgagt gcaacatctg cttggacaca gccaaggatg ccgtcatcag cctgtgtggc
301 cacctcttct gttggccgtg tttacatcag tggttggaga ccagacctaa cagacaggtg
361 tgtcctgttt gcaaagctgg catcagccga gacaaggtca tccccctcta tggaaggggc
421 agcactgggc aacaggaccc cagagagaag acccctcctc gtcctcaagg acagaggcca
481 gagccggaga atagaggggg atttcaagga tttggatttg gagatggtgg cttccagatg
541 tcttttggaa ttggggcatt tccctttggg atatttgcca cagcatttaa tataaatgat
601 gggcggcctc ctccagctgt ccctgggaca ccccagtatg tggacgagca gttcctgtca
661 cgcctcttcc tatttgtggc cctggtgatc atgttctggc tcctgattgc ctaatgctgg
721 gctcctgcct acatccgtgg cagggctctg gactggtgac gtgccacccc aactcctggt
781 gtttggcttc ctggctaatc ttgactcctg gaatcagtgg gatcagtaac acatcaagga
841 gtcttgtttc ttcatcagag ctttggaact cgagaccagt tggcgatgac ccctgaatat
901 cgccaccgct gtaaacactc tataacttca ggccttggca ttgagtcatc tctcatgggt
961 gacaccatga aatcttgttt cagccagttc tgcaggtcct gactctgcag agggaagagg
1021 cagaaagaga gaaactgtca gagtataatt tcacctgagt ttaatattac agaaacaaag
1081 ggatgcacca aatggtattt ctggaaattt tcatgtcttt aaatacccct tggtaagttg
1141 cttctgaagc cagtgggggc tcctcagata gagaggttcc cctttcaaat cccagtgccg
1201 ctctgttctc tttccttccc ctcccactcc ccctcttctt cctctgtaga gatgcaagaa
1261 attgctgtcc cataaaaatc ataattgcag tagctaaagc tggggtcact tcgtgaattc
1321 accagagact caaagatctt ttattggctc tgggctgtgc tcagtgtctt tggcctcaga
1381 gaacaacttg aatgacttcc tggtttcctg gcataaatta ttcctggtga gacatgtggc
1441 ttaactcaca ggtttcccat cagctttctc cctaaaacta tgttcatctg cctctctctg
1501 ccagagaaca tacagccgag aatactgccg aagctgagac tgactactgt gcattaggaa
1561 agacctggag tcaggacttt ggtgggattt ggagctccga ggcagtaata actgaacaag
1621 cagccctgtc ccctaggctg cagaagcttg aatgcatcct ctcccagaac ctgccacagg
1681 aaactggggg ctttgtcagg tcagcccaac tgcatgcaaa agaccaccat cctcagaagc
1741 caagttgtct tttatgaaga ggcaaggaaa ggggaaaccc acatgtgacc ctgattttgg
1801 tatggcttga tagagttccc tgaaaactcc ttgtatgtgt gctaaaacca gggaagcatg
1861 tgactgccaa gcaggcaacc cctgatgatt tgtaaagcca ggtggcaggg ccttggggag
1921 ccccagcaca atgatattgt gtggtcttcc ctcctgtgga atcgagggga aattattctt
1981 cccaatacct tgatttgatt ttcagtttca taagcttctt cctctgaatc ttattgaggg
2041 actatggtac caagcaggta ggactgttca cctggtggaa cagttcttgc tctgccttct
2101 aggcttcatc ccagaaatcc agcctctttc tggagacccc aaagctggag ggagatgggc
2161 tttcctctgg gcctctctcc tactttgcca tccacactgc tcctggctaa ccccagcaat
2221 aaccaacaaa tggtaggaag ccccatctat tgctttttct caattatgac tgcatagttt
2281 atggaaacaa agatcttgag gaagatgagg gaagccctcc cctcttcaca gtccccatct
2341 cttctccttt gtacctgtca acaccagagt tcagtgttta aacagacaaa atataaagta
2401 ttgagtaggt ggttcatatg ccgaatccac ttggtaggaa gaaaccacca gctttatagt
2461 gtgcctgata gattttaaac attcctgggc acccactcaa gagtgctctt tttatcacct
2521 tctggaaatc cgcaaagttg caggggcctc tggagtgtct cttctctaga gagaattggt
2581 gggacccccc tcagtgcagt ggccccaact agtggaggga gagaggactt aagtcagatg
2641 gactcaacag aaatgggttt ccagaagaat aatgaaaagt tgtgggtagg aaaatgaatc
2701 atttggactc ttcaatgaaa tggagtgagc ccaggagagc tcagccaaca gaggcactct
2761 gggaacctgt tagtaaagcc aggctggcca aatgccattt gattttgaac ctcgtaggtc
2821 cccactcacc ctctgccagg agctaagtaa ggcaggagag ctgacttggg actcctggct
2881 cggccccaac agggagcccc cttcccacca tccctcggca agctcaccac ctcatccttc
2941 tgtcaaggca gctttccttt cttttgtgtg ttttctgtgt tcttagcctc caccctcctc
3001 ctgccaccct tgtggactag gaccaggtcc tgaccccagt cagaaaatga tgatatgtac
3061 agtggcacac cttaaccagt cactaatttt cactgttgtg aaagtgattt gatttagaat
3121 taaacaaatg gttttacatt aaaaaaaaaa aaaaaaaaa
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