LOCUS BC033165 2180 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens zinc finger protein 90 homolog (mouse), mRNA (cDNA
clone IMAGE:4544629), partial cds.
ACCESSION BC033165
VERSION BC033165.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2180)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2180)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 43 Row: e Column: 3.
FEATURES Location/Qualifiers
source 1..2180
/db_xref="H-InvDB:HIT000041821"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4544629"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2180
/gene="ZFP90"
/gene_synonym="NK10"
/gene_synonym="ZNF756"
/db_xref="GeneID:146198"
/db_xref="HGNC:HGNC:23329"
/db_xref="MIM:609451"
CDS <1..900
/gene="ZFP90"
/gene_synonym="NK10"
/gene_synonym="ZNF756"
/codon_start=1
/product="ZFP90 protein"
/protein_id="AAH33165.2"
/db_xref="GeneID:146198"
/db_xref="HGNC:HGNC:23329"
/db_xref="MIM:609451"
/translation="YRCNLCGRSFRHGTSLTQHEVTHSGEKPFQCKECGKAFSRCSSL
VQHERTHTGEKPFECSICGRAFGQSPSLYKHMRIHKRGKPYQSSNYSIDFKHSTSLTQ
DESTLTEVKSYHCNDCGEDFSHITDFTDHQRIHTAENPYDCEQAFSQQAISHPGEKPY
QCNVCGKAFKRSTSFIEHHRIHTGEKPYECNECGEAFSRRSSLTQHERTHTGEKPYEC
IDCGKAFSQSSSLIQHERTHTGEKPYECNECGRAFRKKTNLHDHQRIHTGEKPYSCKE
CGKNFSRSSALTKHQRIHTRNKL"
BASE COUNT 720 a 427 c 437 g 596 t
ORIGIN
1 tatcgatgta atctatgtgg gaggtccttt aggcatggca catccctcac tcaacacgag
61 gtcacacaca gtggagagaa gcccttccag tgtaaggaat gtgggaaagc ctttagtcga
121 tgttcttccc ttgtccaaca tgagaggact catactggag agaaaccttt tgaatgtagc
181 atatgtggga gggcttttgg tcagagccca tccctttata aacatatgag gattcataag
241 agaggcaaac cttaccaaag cagtaactac agcatagatt tcaagcacag cacatctctc
301 actcaagatg aaagcactct taccgaagtg aaatcctacc attgtaatga ctgtggggaa
361 gactttagtc acattacaga ctttactgac catcagagga tccatactgc agagaacccc
421 tatgattgtg agcaggcttt tagtcagcaa gctatttctc atcctggaga gaaaccctat
481 caatgtaatg tatgtgggaa agctttcaaa aggagtacaa gtttcataga gcatcacaga
541 attcatactg gagagaaacc ctatgaatgt aatgagtgtg gagaagcctt tagtcgacgc
601 tcatcgctta ctcaacatga gagaacccac actggagaga aaccctatga atgtattgac
661 tgtgggaaag cctttagtca aagttcatct ctcattcagc atgagagaac tcatactgga
721 gagaagccct atgaatgtaa tgaatgtggg agagccttcc gaaaaaaaac caacctgcat
781 gatcatcaga gaattcatac tggagaaaaa ccctattctt gtaaggaatg tgggaaaaac
841 ttcagccgaa gttcagctct tactaaacac cagagaattc atactcgaaa taaactctag
901 gaaccgtgaa attaaggaat ttgcagaatg ctttagctaa aatgttctga ttcaggatca
961 gaggattctt agagagcttg ggaatgtaat gaattacgtg tgtgtttata cgttgtgtgt
1021 ggagaaaact gccagtagac agattttttt ttttaacata aagacacatt ctcagatctg
1081 attacagact agtgtaaaaa cagctacatg tatgtagctg gttggggatg atatgcctgt
1141 atgttggact ttgcttttga atatatgtat gcaggatatc atcaagtttc aacatcttga
1201 cttgtgaccc ccaatgtcaa cagctttttt aaaaagcaaa ttcctgcagt aatgaccaaa
1261 acccatttta aaaattgctt gacaactgca ctcaactgca gctcttacat taacttcacc
1321 atggaaacca gttccaactc caggaagtca ccattcaaag aattagatca actagcccaa
1381 ccacttcatt gtacagatga agactgaaag ccaaagatgt gaagtggttt ccacagtatg
1441 atacagccta taagggtaaa gctgggttaa aaatgcaggt ttcctggatt tggggcccca
1501 tggccttgcc agtgaaaagg ttatttttgg actcagaggg ctttaaaata aattttaaga
1561 tgtatcagat acacaaacat ttaatgggca cctatgggtt ggacactttg agaattctta
1621 aaagtataag tgggagcaaa atgtatgcaa atttatcaca aactatttaa agcaacttct
1681 tggaggctta caaaccacaa tttaacagaa actgtagatg gttgaactac tagtgacttt
1741 tttccccttt tcccagttac aattatactt tcagctaaca tatgccagtt tcacagaact
1801 attaagtccc cttattgtac tttttatggc atgcccatga aaaagcactt tcttaagcct
1861 acagtatcag atcaatggga aaacaacaga aaactaagag gagaattttc ccgttaattt
1921 tcttgcagaa aagttaagtc taattgccca ttgccataaa ttttgccttg tactcagaga
1981 agcaacatgc actggctcat tttatgtgca aagaaaagat ttcaccatta aaaaaattaa
2041 cttggctagg tatggtgtct cgcacctgtg atcccagcac tttgggtggc taaggcagat
2101 agactgcttg aacccaggag ttcaagacca gcctggacaa catggtgaaa ccccatctct
2161 ttaaaaaaaa aaaaaaaaaa
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