LOCUS BC033154 2376 bp mRNA linear HUM 23-JUN-2006
DEFINITION Homo sapiens centromere protein L, mRNA (cDNA clone MGC:45781
IMAGE:4139038), complete cds.
ACCESSION BC033154
VERSION BC033154.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2376)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2376)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 43 Row: d Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 58743362.
FEATURES Location/Qualifiers
source 1..2376
/db_xref="H-InvDB:HIT000041818"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45781 IMAGE:4139038"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2376
/gene="CENPL"
/gene_synonym="CENP-L"
/gene_synonym="dJ383J4.3"
/gene_synonym="FLJ31044"
/gene_synonym="RP3-383J4.1"
/db_xref="GeneID:91687"
/db_xref="HGNC:HGNC:17879"
CDS 287..1459
/gene="CENPL"
/gene_synonym="CENP-L"
/gene_synonym="dJ383J4.3"
/gene_synonym="FLJ31044"
/gene_synonym="RP3-383J4.1"
/codon_start=1
/product="CENPL protein"
/protein_id="AAH33154.1"
/db_xref="GeneID:91687"
/db_xref="HGNC:HGNC:17879"
/translation="MDSYSAPESTPSASSRPEDYFIGATPLQKRLESVRKQSSFILTP
PRRKIPQCSQLQEDVDPQKVAFLLHKQWTLYSLTPLYKFSYSNLKEYSRLLNAFIVAE
KQKGLAVEVGEDFNIKVIFSTLLGMKGTQRDPEAFLVQGLILSPRLEYSGTILVDCNL
CLLGSSDPSTLAFQVAGTAGACHHTRIVSKSQLPSENREGKVLWTGWFCCVFGDSLLE
TVSEDFTCLPLFLANGAESNTAIIGTWFQKTFDCYFSPLAINAFNLSWMAAMWTACKM
DHYVATTEFLWSVPCSPQSLDISFAIHPEDAKALWDSVHKTPGEVTQEEVDLFMDCLY
SHFHRHFKIHLSATRLVRVSTSVASAHTDGKIKILCHKYLIGVLAYLTELAIFQIE"
BASE COUNT 684 a 497 c 518 g 677 t
ORIGIN
1 ggtctctgac aggctcagct ggagagggac gggttgggac gcactgtcct tttgcccttc
61 cccctccgcg agcagaagct gactccgcag gagcgagggt cgcagagctg ggtgagcgga
121 aatgtccctc ccagagtgaa gtcgcagggc ccgccccgcg tctgagggag cggaggtctt
181 cctgggggat ttcagtctcc acatagtttt ggagccggac ttttgaagaa tgattcgtga
241 atccggaatg ggtgacagcg tcatcacggc attttattga cagaccatgg attcttacag
301 tgcaccagag tcaactccta gtgcatcctc aagacctgaa gattacttta taggtgccac
361 tcctctgcag aaacgattag aatcggtcag gaagcagagt tcatttatcc tgactccacc
421 tcgaaggaaa attccccagt gttcgcagtt gcaggaagat gttgaccctc aaaaggttgc
481 attccttctg cataaacagt ggactttata tagtttaact cccttatata aattctccta
541 tagtaatctc aaagagtatt ctagacttct caatgctttt attgttgctg aaaagcaaaa
601 aggacttgct gtggaagtgg gagaagactt caacatcaaa gtgatttttt ctactctcct
661 aggaatgaaa ggaacacaaa gggacccgga agcatttctt gtccagggtc tcattttgtc
721 acccaggctg gagtacagtg gcacgatctt ggttgactgc aacctctgtc tcctgggctc
781 aagtgatcct tccaccttag ccttccaagt agctgggact gcaggtgcat gccaccacac
841 tcggattgtg tcaaaatctc aattgccatc tgagaataga gaaggtaaag tgctgtggac
901 tggctggttc tgctgtgtat ttggagacag tcttctggag actgtttcag aagatttcac
961 ctgtctgccc ttattccttg caaatggagc agagtctaac acagcaataa ttggaacttg
1021 gtttcagaaa acctttgact gttatttcag tcctttagca atcaatgcat ttaatctttc
1081 ctggatggct gccatgtgga ctgcatgcaa aatggaccat tatgtggcta ctactgaatt
1141 tctttggtct gtaccctgta gccctcaaag tctggacatt tctttcgcaa tacatccaga
1201 ggatgcaaaa gctctatggg acagtgtcca caaaacacct ggggaggtta cccaggaaga
1261 agttgaccta ttcatggatt gcctttattc acatttccat agacatttca aaattcattt
1321 atcagccaca agattagttc gtgtttcaac atctgtagct tcagcacata ctgatggaaa
1381 aataaagatt ctgtgtcata aataccttat tggagtgtta gcatatttga cagaactggc
1441 aatttttcaa attgagtgaa gccttatgtg gactataagt tatagattat atactcttat
1501 tgataacttg cctaattgct atgctgaaag agactgcagg agaaataggc atctatctct
1561 gcatctgttt tccccaccat gcctttggag ttgccaagat ggaagccaag aaggatctag
1621 aagaacaaag aatatggtag tagatgagcc acagccaggt gcccatgtac taatcatgat
1681 aacctgacat gccattctca aaatgctgag ttgttaattt cttgtcatct ttaaatatat
1741 atatataggc tgggcttggt ggctcacacc tgtaattcca gcactttggg aggctgaggt
1801 gggtggatca tttgaggcca ggaattcaag accagcctgg ccaacatggt gaaacccctt
1861 ctctactgaa aatacaataa ttagctgggc gtggtggcac atgcctatga tcccagctac
1921 tggggaggct gaggcaggag aatcgtttta acccagaaga caggctgcag tgagccaaga
1981 ctgcaccact gcactccagc ctgggcaaca aagtgagact ctgcctcaaa aaataaaaaa
2041 gaaataaaat aaataaatac agcgtttatt atgtttaaac tcttaggatt caaatgagat
2101 gtatctaatg gatatttctg atttgggtct ttaaaacctt taatctcttt taagcatttt
2161 agacttgcat tcagaaagaa ttctgtcttc taaagacatt ttcctagcat ttcactgcgg
2221 agaactggca atcaaaatcc cctcaaaagg gaactaaaga ttaatataca cattttttta
2281 gtcattaata tgcttctgtt ttaaatacag ttcaactcct gttgcaatgt tgaattaaat
2341 gtttatttta aaatgaaaaa aaaaaaaaaa aaaaaa
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