LOCUS BC033153 1968 bp mRNA linear HUM 20-OCT-2005 DEFINITION Homo sapiens scavenger receptor class A, member 5 (putative), mRNA (cDNA clone MGC:45780 IMAGE:4138639), complete cds. ACCESSION BC033153 VERSION BC033153.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1968) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1968) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 43 Row: d Column: 13 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 47271476. FEATURES Location/Qualifiers source 1..1968 /db_xref="H-InvDB:HIT000041817" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:45780 IMAGE:4138639" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1968 /gene="SCARA5" /gene_synonym="FLJ23907" /gene_synonym="MGC45780" /db_xref="GeneID:286133" /db_xref="HGNC:HGNC:28701" /db_xref="IMGT/GENE-DB:28701" /db_xref="MIM:28701" CDS 384..1586 /gene="SCARA5" /gene_synonym="FLJ23907" /gene_synonym="MGC45780" /codon_start=1 /product="SCARA5 protein" /protein_id="AAH33153.1" /db_xref="GeneID:286133" /db_xref="HGNC:HGNC:28701" /db_xref="IMGT/GENE-DB:28701" /db_xref="MIM:28701" /translation="MENKAMYLHTVSDCDTSSICEDSFDGRSLSKLNLCEDGPCHKRR ASICCTQLGSLSALKHAVLGLYLLVFLILVGIFILAVSRPRSSPDDLKALTRNVNRLN ESFRDLQLRLLQAPLQADLTEQVWKVQDALQNQSDSLLALAGAVQRLEGALWGLQAQA VQTEQAVALLRDRTGQQSDTAQLELYQLQVESNSSQLLLRRHAGLLDGLARRVGILGE ELADVGGVLRGLNHSLSYDVALHRTRLQDLRVLVSNASEDTRRLRLAHVGMELQLKQE LAMLNAVTEDLRLKDWEHSIALRNISLAKGPPGPKGDQGDEGKEGRPGIPGLPGLRGL PGERGTPGLPGPKGDDGKLGATGPMGMRGFKGDRGPKGEKGEKGDRAGDASKDILLGP WDMVLAQG" BASE COUNT 404 a 554 c 651 g 359 t ORIGIN 1 tagaggagct gccggtgcct cctcagaaca tctcctgatc gctacccagg accaggcacc 61 aaggacaggg agtcccaggc gcacaccccc cattctgggt cccccaggcc cagaccccca 121 ctctgccaca ggttgcatct tgacctggtc ctcctgcaga agtggcccct gtggtcctgc 181 tctgagactc gtccctgggc gcccctgcag cccctttcta tgactccatc tggatttggc 241 tggctgtggg gacgcggtcc gaggggcggc ctggctctca gcgtggtggc agccagctct 301 ctggccacca tggcaaatgc tgagatctga ggggacaagg ctctacagcc tcagccaggg 361 gcactcagct gttgcagggt gtgatggaga acaaagctat gtacctacac accgtcagcg 421 actgtgacac cagctccatc tgtgaggatt cctttgatgg caggagcctg tccaagctga 481 acctgtgtga ggatggtcca tgtcacaaac ggcgggcaag catctgctgt acccagctgg 541 ggtccctgtc ggccctgaag catgctgtcc tggggctcta cctgctggtc ttcctgattc 601 ttgtgggcat cttcatctta gcagtgtcca ggccgcgcag ctcccctgac gacctgaagg 661 ccctgactcg caatgtgaac cggctgaatg agagcttccg ggacttgcag ctgcggctgc 721 tgcaggctcc gctgcaagcg gacctgacgg agcaggtgtg gaaggtgcag gacgcgctgc 781 agaaccagtc agactcgttg ctggcgctgg cgggcgcagt gcagcggctg gagggcgcgc 841 tatgggggct gcaggcgcag gcggtgcaga ccgagcaggc ggtggccctg ctgcgggacc 901 gcacgggcca gcagagcgac acggcgcagc tggagctcta ccagctgcag gtggagagca 961 acagtagcca gctgctgctg aggcgccacg cgggcctgct ggacgggctg gcgcgcaggg 1021 tgggcatcct gggcgaggag ctggccgacg tgggcggcgt gctgcgcggc ctcaaccaca 1081 gcctgtccta cgacgtggcc ctccaccgca cgcggctgca ggacctgcgg gtgctggtga 1141 gcaacgccag cgaggacacg cgccgcctgc gcctggcgca cgtaggcatg gagctgcagc 1201 tgaagcagga gctggccatg ctcaacgcgg tcaccgagga cctgcgcctc aaggactggg 1261 agcactccat cgcactgcgg aacatctccc tcgcgaaagg gccaccggga cccaaaggtg 1321 atcaggggga tgaaggaaag gaaggcaggc ctggcatccc tggattgcct ggacttcgag 1381 gtctgcccgg ggagagaggt accccaggat tgcccgggcc caagggcgat gatgggaagc 1441 tgggggccac aggaccaatg ggcatgcgtg ggttcaaagg tgaccgaggc ccaaaaggag 1501 agaaaggaga gaaaggagac agagctgggg atgccagtaa ggacattctg ctggggccgt 1561 gggatatggt gttggcacag ggctagctgt cccccgagca gccccataag tttggaggtt 1621 cagaggctgg agccatggct ggggctcaag tgtcaaagga ggctccctac cttttttagg 1681 gctctgctgg tctagcaaga gatgctgata gaccccaggg gcactggcca catttctaga 1741 ggtgtcataa acctggcggt tgtgtgcatg gatctggagg cttcccccgg tcactcgcta 1801 gcccagctgg tataatctct gtgcctcagt gttctcatct ataaaatagg gataacagga 1861 gtctttacct tataaggtca ttgtgaaaat tgaatgagtt aatctgtgta aagtgcttat 1921 gatcatgctg gacacctggt gaggaaaaaa aaaaaaaaaa aaaaaaaa //