LOCUS       BC033153                1968 bp    mRNA    linear   HUM 20-OCT-2005
DEFINITION  Homo sapiens scavenger receptor class A, member 5 (putative), mRNA
            (cDNA clone MGC:45780 IMAGE:4138639), complete cds.
ACCESSION   BC033153
VERSION     BC033153.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1968)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1968)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (25-JUN-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 43 Row: d Column: 13
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 47271476.
FEATURES             Location/Qualifiers
     source          1..1968
                     /db_xref="H-InvDB:HIT000041817"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:45780 IMAGE:4138639"
                     /tissue_type="Muscle, rhabdomyosarcoma"
                     /clone_lib="NIH_MGC_17"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..1968
                     /gene="SCARA5"
                     /gene_synonym="FLJ23907"
                     /gene_synonym="MGC45780"
                     /db_xref="GeneID:286133"
                     /db_xref="HGNC:HGNC:28701"
                     /db_xref="IMGT/GENE-DB:28701"
                     /db_xref="MIM:28701"
     CDS             384..1586
                     /gene="SCARA5"
                     /gene_synonym="FLJ23907"
                     /gene_synonym="MGC45780"
                     /codon_start=1
                     /product="SCARA5 protein"
                     /protein_id="AAH33153.1"
                     /db_xref="GeneID:286133"
                     /db_xref="HGNC:HGNC:28701"
                     /db_xref="IMGT/GENE-DB:28701"
                     /db_xref="MIM:28701"
                     /translation="MENKAMYLHTVSDCDTSSICEDSFDGRSLSKLNLCEDGPCHKRR
                     ASICCTQLGSLSALKHAVLGLYLLVFLILVGIFILAVSRPRSSPDDLKALTRNVNRLN
                     ESFRDLQLRLLQAPLQADLTEQVWKVQDALQNQSDSLLALAGAVQRLEGALWGLQAQA
                     VQTEQAVALLRDRTGQQSDTAQLELYQLQVESNSSQLLLRRHAGLLDGLARRVGILGE
                     ELADVGGVLRGLNHSLSYDVALHRTRLQDLRVLVSNASEDTRRLRLAHVGMELQLKQE
                     LAMLNAVTEDLRLKDWEHSIALRNISLAKGPPGPKGDQGDEGKEGRPGIPGLPGLRGL
                     PGERGTPGLPGPKGDDGKLGATGPMGMRGFKGDRGPKGEKGEKGDRAGDASKDILLGP
                     WDMVLAQG"
BASE COUNT          404 a          554 c          651 g          359 t
ORIGIN      
        1 tagaggagct gccggtgcct cctcagaaca tctcctgatc gctacccagg accaggcacc
       61 aaggacaggg agtcccaggc gcacaccccc cattctgggt cccccaggcc cagaccccca
      121 ctctgccaca ggttgcatct tgacctggtc ctcctgcaga agtggcccct gtggtcctgc
      181 tctgagactc gtccctgggc gcccctgcag cccctttcta tgactccatc tggatttggc
      241 tggctgtggg gacgcggtcc gaggggcggc ctggctctca gcgtggtggc agccagctct
      301 ctggccacca tggcaaatgc tgagatctga ggggacaagg ctctacagcc tcagccaggg
      361 gcactcagct gttgcagggt gtgatggaga acaaagctat gtacctacac accgtcagcg
      421 actgtgacac cagctccatc tgtgaggatt cctttgatgg caggagcctg tccaagctga
      481 acctgtgtga ggatggtcca tgtcacaaac ggcgggcaag catctgctgt acccagctgg
      541 ggtccctgtc ggccctgaag catgctgtcc tggggctcta cctgctggtc ttcctgattc
      601 ttgtgggcat cttcatctta gcagtgtcca ggccgcgcag ctcccctgac gacctgaagg
      661 ccctgactcg caatgtgaac cggctgaatg agagcttccg ggacttgcag ctgcggctgc
      721 tgcaggctcc gctgcaagcg gacctgacgg agcaggtgtg gaaggtgcag gacgcgctgc
      781 agaaccagtc agactcgttg ctggcgctgg cgggcgcagt gcagcggctg gagggcgcgc
      841 tatgggggct gcaggcgcag gcggtgcaga ccgagcaggc ggtggccctg ctgcgggacc
      901 gcacgggcca gcagagcgac acggcgcagc tggagctcta ccagctgcag gtggagagca
      961 acagtagcca gctgctgctg aggcgccacg cgggcctgct ggacgggctg gcgcgcaggg
     1021 tgggcatcct gggcgaggag ctggccgacg tgggcggcgt gctgcgcggc ctcaaccaca
     1081 gcctgtccta cgacgtggcc ctccaccgca cgcggctgca ggacctgcgg gtgctggtga
     1141 gcaacgccag cgaggacacg cgccgcctgc gcctggcgca cgtaggcatg gagctgcagc
     1201 tgaagcagga gctggccatg ctcaacgcgg tcaccgagga cctgcgcctc aaggactggg
     1261 agcactccat cgcactgcgg aacatctccc tcgcgaaagg gccaccggga cccaaaggtg
     1321 atcaggggga tgaaggaaag gaaggcaggc ctggcatccc tggattgcct ggacttcgag
     1381 gtctgcccgg ggagagaggt accccaggat tgcccgggcc caagggcgat gatgggaagc
     1441 tgggggccac aggaccaatg ggcatgcgtg ggttcaaagg tgaccgaggc ccaaaaggag
     1501 agaaaggaga gaaaggagac agagctgggg atgccagtaa ggacattctg ctggggccgt
     1561 gggatatggt gttggcacag ggctagctgt cccccgagca gccccataag tttggaggtt
     1621 cagaggctgg agccatggct ggggctcaag tgtcaaagga ggctccctac cttttttagg
     1681 gctctgctgg tctagcaaga gatgctgata gaccccaggg gcactggcca catttctaga
     1741 ggtgtcataa acctggcggt tgtgtgcatg gatctggagg cttcccccgg tcactcgcta
     1801 gcccagctgg tataatctct gtgcctcagt gttctcatct ataaaatagg gataacagga
     1861 gtctttacct tataaggtca ttgtgaaaat tgaatgagtt aatctgtgta aagtgcttat
     1921 gatcatgctg gacacctggt gaggaaaaaa aaaaaaaaaa aaaaaaaa
//