LOCUS BC033140 2783 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens isthmin 2 homolog (zebrafish), mRNA (cDNA clone
IMAGE:3844836), partial cds.
ACCESSION BC033140
VERSION BC033140.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2783)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2783)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 43 Row: c Column: 10.
FEATURES Location/Qualifiers
source 1..2783
/db_xref="H-InvDB:HIT000092948"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3844836"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2783
/gene="ISM2"
/gene_synonym="TAIL1"
/db_xref="GeneID:145501"
/db_xref="HGNC:HGNC:23176"
CDS <1..1557
/gene="ISM2"
/gene_synonym="TAIL1"
/codon_start=1
/product="ISM2 protein"
/protein_id="AAH33140.1"
/db_xref="GeneID:145501"
/db_xref="HGNC:HGNC:23176"
/translation="PRPLKEEEEAPLLPRTHLQAEPHQHGCWTVTEPAAMTPGNATPP
RTPEVTPLRLELQKLPGLANTTLSTPNPDTQASASADPRPLREEEEARLLPRTHLQAE
LHQHGCWTVTEPAALTPGNATPPRTQEVTPLLLELQKLPELVHATLSTPNPDNQVTIK
VVEDPQAEVSIDLLAEPSNPPPQDTLSWLPALWSFLWGDYKGEEKDRAPGEKGEEKEE
DEDYPSEDIEGEDQEDKEEDEEEQALWFNGTTDNWDQGWLAPGDWVFKDSVSYDYEPQ
KEWSPWSPCSGNCSTGKQQRTRPCGYGCTATETRTCDLPSCPGTEDKDTLGLPSEEWK
LLARNATDMHDQDVDSCEKWLNCKSDFLIKYLSQMLRDLPSCPCAYPLEAMDSPVSLQ
DEHQGRSFRWRDASGPRERLDIYQPTARFCLRSMLSGESSTLAAQHCCYDEDSRLLTR
GKGAGMPNLISTDFSPKLHFKFDTTPWILCKGDWSRLHAVLPPNNGRACTDNPLEEEY
LAQLQEAKEY"
BASE COUNT 597 a 848 c 807 g 531 t
ORIGIN
1 cctaggcctc tgaaggaaga ggaggaggca ccactgctcc ccagaaccca cctgcaggca
61 gagccacacc aacatggatg ctggactgtc actgagccag cagccatgac cccaggcaac
121 gccacccctc ccaggacccc agaggttact ccgttgcggc tggagctgca gaagctgccg
181 ggattggcca acacaacctt gagtacccct aaccctgata cccaggcttc agcctccgca
241 gatcctaggc ctctgaggga agaggaggag gcacgactgc tccccagaac ccacctgcag
301 gcagagctac accaacatgg atgttggact gtcactgagc cagcagccct gaccccaggg
361 aatgccacgc ctcccaggac ccaggaggtt actcccttgc tgctggagct gcagaagctg
421 ccagaattgg tccacgcaac cttgagtacc cctaaccctg ataaccaggt gaccatcaag
481 gtggtggagg acccccaggc cgaggtgtcg atagacctgt tggctgagcc cagcaatccc
541 ccgccccagg atacccttag ctggctgccc gccctctggt ccttcctctg gggagactac
601 aaaggagagg aaaaagacag ggccccaggg gagaaggggg aggaaaagga ggaagacgag
661 gactatcctt cagaggatat cgagggtgag gatcaagagg acaaagagga agatgaggaa
721 gagcaggcgc tctggttcaa tggaactaca gacaactggg accagggctg gctggccccc
781 ggggattggg tcttcaagga ttctgtcagc tacgactatg agcctcagaa ggagtggagt
841 ccctggtctc cctgcagtgg gaactgcagc actggcaagc agcagaggac tcggccctgt
901 ggctatggct gcactgccac cgagacccgt acctgtgacc tgccctcctg tcctggcact
961 gaggacaagg acaccttggg cctccccagt gaggagtgga agctcctggc ccgcaatgct
1021 acggacatgc atgatcaaga tgtggacagc tgtgagaagt ggctgaactg caagagcgac
1081 ttcctaatca agtatctgag ccagatgctg cgggacctgc ccagctgccc gtgtgcctac
1141 ccactggagg ccatggacag ccctgtgagc ctacaggacg agcaccaggg ccgcagcttc
1201 cggtggaggg atgccagtgg ccctcgcgag cgcctggaca tctaccagcc cacggcgcgc
1261 ttctgcctgc gttccatgct gtctggggag agcagcacac tggccgccca gcactgctgc
1321 tatgacgagg acagccggct gctgacccgt ggcaagggcg ccggcatgcc caacctcatc
1381 agcaccgact tctcacctaa gctgcacttc aagttcgaca cgacgccctg gatcctgtgc
1441 aagggggact ggagccgcct ccacgctgtg ctccctccca acaacggccg agcctgcacc
1501 gacaaccccc tggaggagga gtacctagca cagttgcagg aggccaagga gtactagtga
1561 cggggttgct gaacagacac tgcagggaga gggcaggcgg ctgctgctgt tgcacgggag
1621 aactttcctg gtagggccct cacccgcccc tgcccagaca gggtgaggaa agggctcccc
1681 cagtgaggtt ggtccgaggc tgtgtgccct ctgccagcga ccccgaagca gatatctcag
1741 tggggttagt gagaaggttg aagggtatgt agggcccagg gtgggtgtcc ctgggagccc
1801 tggaaatgtg catatgtgca tgtgtctgcc ggggcctccc tctgctgcct gctgggaccc
1861 tggccactca tttttctcct ccttgggagc tgggctcttc tgccctggct ctgcacataa
1921 gtgttagcca gcagctccag aaaaatcccg attcccggga tctgccacga gtcactccta
1981 ctccaccctg atggccagca gaggaagggc cactcttctc atgggcacag ccatcctttg
2041 ccgggggggc atccagcccg ggtggccacc cctccttatc tctgggtggt gcacatgccc
2101 ttctttcccc actccctgcc acgagccact gcacaggagg ctatctgtag ccccaagctg
2161 cctttctgtt ggacaccaac tttagtcttg ggctgcaagc cagcccagct gaggcgaagt
2221 ggactccagg cagggaatgg gttgcccaat tctggtccct ttcctttgct cagccccctc
2281 tgttctgctg attgtaggga tgtgcagggc tgggagttgg cactcccccc gagtggggag
2341 gtgacagctt gtcacagtag ccaggcttgg gtgggttcag cactagctcg ggacggtgtg
2401 tcacacgtct atagtaaacc agttctctgg gaggggaaaa aagccctgat ttattgcatt
2461 tgggcagctt ctgtggtgta aattctccca gcagtgtccc atgtcatgct gccagcatca
2521 ctgaatgcac tgaactcaga gttgggaaga gatgcacata atcgctctcc cggcacacct
2581 catgcctctt ccctgcctcc ccattcccct ggctgcactt ccttgccttc tatggggttg
2641 aaatgttgaa gtctcaactg tctctgttca caagagccac caaaagttag gggacttcag
2701 tcctagcccc cagatggccg ccctgaagct ctctgggctc ctcagcaata aagcacttta
2761 ttttcaaaaa aaaaaaaaaa aaa
//