LOCUS BC033109 2516 bp mRNA linear HUM 30-MAR-2004
DEFINITION Homo sapiens ATPase family, AAA domain containing 3A, mRNA (cDNA
clone MGC:45699 IMAGE:4877449), complete cds.
ACCESSION BC033109
VERSION BC033109.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2516)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2516)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 43 Row: h Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13994293.
FEATURES Location/Qualifiers
source 1..2516
/db_xref="H-InvDB:HIT000041807"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45699 IMAGE:4877449"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_49"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2516
/gene="ATAD3A"
/gene_synonym="FLJ10709"
/db_xref="GeneID:55210"
CDS 91..1851
/gene="ATAD3A"
/gene_synonym="FLJ10709"
/codon_start=1
/product="ATAD3A protein"
/protein_id="AAH33109.1"
/db_xref="GeneID:55210"
/translation="MSWLFGINKGPKGEGAGPPPPLPPAQPGAEGGGDRGLGDRPAPK
DKWSNFDPTGLERAAKAARELEHSRYAKDALNLAQMQEQTLQLEQQSKLKEYEAAVEQ
LKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQE
ESVQKQEAMRRATVEREMELRHKNEMLRVEAEARARAKAERENADIIREQIRLKAAEH
RQTVLESIRTAGTLFGEGFRAFVTDWDKVTATVAGLTLLAVGVYSAKNATLVAGRFIE
ARLGKPSLVRETSRITVLEALRHPIQVSRRLLSRPQDALEGVVLSPSLEARVRDIAIA
TRNTKKNRSLYRNILMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMGREGVTAM
HKLFDWANTSRRGLLLFVDEADAFLRKRATEKISEDLRATLNAFLYRTGQHSNKFMLV
LASNQPEQFDWAINDRINEMVHFDLPGQEERERLVRMYFDKYVLKPATEGKQRLKLAQ
FDYGRKCSEVARLTEGMSGREIAQLAVSWQATAYASEDGVLTEAMMDTRVQDAVQQHQ
QKMCWLKAEGPGRGDEPSPS"
misc_feature 1129..1713
/gene="ATAD3A"
/gene_synonym="FLJ10709"
/note="AAA; Region: ATPase family associated with various
cellular activities (AAA). AAA family proteins often
perform chaperone-like functions that assist in the
assembly, operation, or disassembly of protein complexes"
/db_xref="CDD:pfam00004"
BASE COUNT 532 a 748 c 862 g 374 t
ORIGIN
1 gctcgcggcg cgtggaggct gctcccagcc gcgcgcgagt cagactcggg tgggggtccc
61 ggcggcggta gcggcggcgg cggtgcgagc atgtcgtggc tcttcggcat taacaagggc
121 cccaagggtg aaggcgcggg gccgccgccg cctttgccgc ccgcgcagcc cggggccgag
181 ggcggcgggg accgcgggtt gggagaccgg ccggcgccca aggacaaatg gagcaacttc
241 gaccccaccg gcctggagcg cgccgccaag gcggcgcgcg agctggagca ctcgcgttat
301 gccaaggacg ccctgaatct ggcacagatg caggagcaga cgctgcagtt ggagcaacag
361 tccaagctca aagagtatga ggccgccgtg gagcagctca agagcgagca gatccgggcg
421 caggctgagg agaggaggaa gaccctgagc gaggagaccc ggcagcacca ggccagggcc
481 cagtatcaag acaagctggc ccggcagcgc tacgaggacc aactgaagca gcagcaactt
541 ctcaatgagg agaatttacg gaagcaggag gagtccgtgc agaagcagga agccatgcgg
601 cgagccaccg tggagcggga gatggagctg cggcacaaga atgagatgct gcgagtggag
661 gccgaggccc gggcgcgcgc caaggccgag cgggagaatg cagacatcat ccgcgagcag
721 atccgcctga aggcggccga gcaccgtcag accgtcttgg agtccatcag gacggctggc
781 accttgtttg gggaaggatt ccgtgccttt gtgacagact gggacaaagt gacagccacg
841 gtggctgggc tgacgctgct ggctgttggg gtctactcag ccaagaatgc cacgcttgtc
901 gccggccgct tcatcgaggc tcggctgggg aagccgtccc tagtgaggga gacgtcccgc
961 atcacggtgc ttgaggcgct gcggcacccc atccaggtca gccggcggct cctcagtcga
1021 ccccaggacg cgctggaggg tgttgtgctc agtcccagcc tggaagcacg ggtgcgcgac
1081 atcgccatag caacaaggaa caccaagaag aaccgcagcc tgtacaggaa catcctgatg
1141 tacgggccac caggcaccgg gaagacgctg tttgccaaga aactcgccct gcactcaggc
1201 atggactacg ccatcatgac aggcggggac gtggccccca tggggcggga aggcgtgacc
1261 gccatgcaca agctctttga ctgggccaat accagccggc gcggcctcct gctctttgtg
1321 gatgaagcgg acgccttcct tcggaagcga gccaccgaga agataagcga ggacctcagg
1381 gccacactga acgccttcct gtaccgcacg ggccagcaca gcaacaagtt catgctggtc
1441 ctggccagca accaaccaga gcagttcgac tgggccatca atgaccgcat caatgagatg
1501 gtccacttcg acctgccagg gcaggaggaa cgggagcgcc tggtgagaat gtattttgac
1561 aagtatgttc ttaagccggc cacagaagga aagcagcgcc tgaagctggc ccagtttgac
1621 tacgggagga agtgctcgga ggtcgctcgg ctgacggagg gcatgtcggg ccgggagatc
1681 gctcagctgg ccgtgtcctg gcaggccacg gcgtatgcct ccgaggacgg ggtcctgacc
1741 gaggccatga tggacacccg cgtgcaagat gctgtccagc agcaccagca gaagatgtgc
1801 tggctgaagg cggaagggcc tgggcgtggg gacgagccct ccccatcctg agtccacagg
1861 gagatccaca gctcacggag cctggccgcg gacccctccc acccctgcct tgccggcccc
1921 tgcacattta ggatatgctc ctgggtgggg actgggctgt gcccagggcc tctgtccccc
1981 aggatgtctt gtggtggcgg tcggccgttc tgccccccag ggcaccccct gttgtaggca
2041 ctggctaggg aggggcaggc ctccttcctg cccctcgaga cactcttggg agatgcattt
2101 tccgtctggc tcacaggggg agggtgaggc tttgcacccc agcccctgcc caggccactg
2161 tgagggtggg tgctggctga gcccccgggg cagcaggagc caggcaggtg atgtctttgt
2221 tctcggctcc cacagcagag ccaggtgagg gggcgcctgc cagggccaga cccaggtggg
2281 gcagcctgaa ccctgcttcc ccctgtggcc ggcatgcccc gatctttcac acactggtga
2341 ccctgagaga ggagggagga gggaacctgg cgggggtgtc tgaggccgca ctgtcagctg
2401 gccggtccaa gcctgtggct ggagctgggg tctgtttccc taataaagtc ccccaggtgc
2461 ctcaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//