LOCUS BC033107 3201 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens sushi domain containing 2, mRNA (cDNA clone MGC:45695
IMAGE:5457186), complete cds.
ACCESSION BC033107
VERSION BC033107.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3201)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3201)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 43 Row: o Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55956886.
FEATURES Location/Qualifiers
source 1..3201
/db_xref="H-InvDB:HIT000041806"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45695 IMAGE:5457186"
/tissue_type="Prostate, carcinoma"
/clone_lib="NIH_MGC_40"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3201
/gene="SUSD2"
/gene_synonym="BK65A6.2"
/gene_synonym="FLJ22778"
/db_xref="GeneID:56241"
/db_xref="HGNC:HGNC:30667"
CDS 45..2513
/gene="SUSD2"
/gene_synonym="BK65A6.2"
/gene_synonym="FLJ22778"
/codon_start=1
/product="sushi domain containing 2"
/protein_id="AAH33107.1"
/db_xref="GeneID:56241"
/db_xref="HGNC:HGNC:30667"
/translation="MKPALLPWALLLLATALGPGPGPTADAQESCSMRCGALDGPCSC
HPTCSGLGTCCLDFRDFCLEILPYSGSMMGGKDFVVRHFKMSSPTDASVICRFKDSIQ
TLGHVDSSGQVHCVSPLLYESGRIPFTVSLDNGHSFPRAGTWLAVHPNKVSMMEKSEL
VNETRWQYYGTANTSGNLSLTWHVKSLPTQTITIELWGYEETGMPYSQEWTAKWSYLY
PLATHIPNSGSFTFTPKPAPPSYQRWRVGALRIIDSKNYAGQKDVQALWTNDHALAWH
LSDDFREDPVAWARTQCQAWEELEDQLPNFLEELPDCPCTLTQARADSGRFFTDYGCD
MEQGSVCTYHPGAVHCVRSVQASLRYGSGQQCCYTADGTQLLTADSSGGSTPDRGHDW
GAPPFRTPPRVPSMSHWLYDVLSFYYCCLWAPDCPRYMQRRPSNDCRNYRPPRLASAF
GDPHFVTFDGTNFTFNGRGEYVLLEAALTDLRVQARAQPGTMSNGTETRGTGLTAVAV
QEGNSDVVEVRLANRTGGLEVLLNQEVLSFTEQSWMDLKGMFLSVAAGDRVSIMLASG
AGLEVSVQGPFLSVSVLLPEKFLTHTHGLLGTLNNDPTDDFTLHSGRVLPPGTSPQEL
FLFGANWTVHNASSLLTYDSWFLVHNFLYQPKHDPTFEPLFPSETTLNPSLAQEAAKL
CGDDHFCNFDVAATGSLSTGTATRVAHQLHQRRMQSLQPVVSCGWLAPPPNGQKEGNR
YLAGSTIYFHCDNGYSLAGAETSTCQADGTWSSPTPKCQPGRSYAVLLGIIFGGLAVV
AAVALVYVLLRRRKGNTHVWGAQP"
BASE COUNT 637 a 1112 c 894 g 558 t
ORIGIN
1 gcctcggagc cactgcactg ctggctgcag acacaggctg caccatgaag ccagccctcc
61 tgccctgggc cctgctgctg ctggcgacag ccctcggccc gggccccgga cccacagcag
121 atgcccaaga gagctgctcc atgcgctgtg gcgccctgga cgggccatgt tcctgccacc
181 cgacgtgctc tggccttggc acctgctgct tggatttccg ggacttctgc ctggagatat
241 tgccctactc aggatccatg atgggcggca aggactttgt ggtgcggcac ttcaagatgt
301 ccagccccac agacgccagt gtgatctgca ggtttaagga cagcatccag accctcggcc
361 atgtggactc ctccgggcaa gtgcactgtg tgtcacctct gctctatgag agcggccgca
421 tccccttcac tgtgtcactg gacaacggcc actccttccc tcgtgcgggc acctggctgg
481 ctgtgcaccc caacaaagtg tcaatgatgg agaagagcga gttggtgaac gagacgcgtt
541 ggcaatacta cggcaccgcc aacacctcag gcaacctcag cctgacctgg catgtcaagt
601 cgctgcccac gcagaccatc accatcgaac tgtggggcta cgaggagaca ggaatgccct
661 actcacagga gtggactgca aagtggtcgt acctgtaccc cctggccaca cacatcccca
721 actccggctc tttcactttc accccaaaac ctgctcctcc cagctaccag agatggcgag
781 tgggtgcact tcggatcatc gacagcaaaa attacgcagg gcagaaggac gtgcaggcgc
841 tctggaccaa cgaccacgca ctggcctggc acctgagcga tgacttccga gaggaccctg
901 tggcctgggc acgaactcag tgccaggcct gggaggagct ggaggatcag ctgcccaact
961 tcctggagga gctgccggac tgcccctgca ccctgaccca ggcccgggct gactccggcc
1021 gcttcttcac ggactacggc tgtgacatgg agcagggcag cgtgtgcacc taccaccccg
1081 gggccgtgca ctgtgtgcgt tctgtgcagg ccagcctccg gtacggctca ggtcagcagt
1141 gctgctacac agcggacggg acgcagctcc tgacagctga ctccagcggc ggcagcactc
1201 ccgaccgcgg ccatgactgg ggcgcacccc cgttccgcac gccaccccga gtgcccagca
1261 tgtcccactg gctctacgat gtcctcagct tctattactg ctgcctctgg gcacccgact
1321 gcccccgcta catgcaacgg cggccctcca atgactgccg caactaccgg cccccaagac
1381 tggcctccgc cttcggagac ccacactttg tgaccttcga cggcaccaac ttcacattca
1441 atgggcgcgg agagtacgtg ctgctggagg cagcgctgac cgacctgagg gtgcaggcgc
1501 gggcccagcc cgggacgatg tccaacggca cggagacccg tggcactggg ctgaccgcag
1561 tggccgtcca ggagggcaac tcagatgtgg tggaagtcag gctggccaac aggaccggag
1621 gtctggaggt gctgctgaac caggaggtgc tgagcttcac cgagcagagc tggatggacc
1681 tgaaaggaat gttcctgtcg gtggctgccg gggacagggt ctccatcatg ctggcatcag
1741 gggccggcct ggaggtcagc gtgcagggcc cgttcctgag tgtgtccgtc ctgctgcctg
1801 agaagttcct cacccacacc cacggcctcc tcgggacact caacaacgac cccaccgacg
1861 acttcaccct gcacagcggg cgcgtcctgc ccccaggcac cagtccccag gagctgttcc
1921 tgtttggggc caactggacc gtgcacaatg cgtcctccct gctcacctac gattcctggt
1981 tcctggtcca caacttcctg taccaaccca agcacgaccc caccttcgag cccctcttcc
2041 ccagtgagac caccctcaac cccagcctgg cacaagaggc agccaaacta tgtggggacg
2101 atcatttctg caactttgat gtggcagcca ctgggagcct gagcacgggc actgccactc
2161 gggtggccca ccagctgcac cagcgtcgca tgcagagcct gcagccagtg gtgtcctgtg
2221 gctggctggc cccacctccc aacggacaaa aggagggcaa caggtacctg gcgggttcca
2281 ccatctactt ccactgtgac aacggctaca gcctggccgg ggcagagacc agcacctgcc
2341 aggctgacgg cacctggtcc tcacccaccc cgaagtgcca gccaggacgc agctacgcgg
2401 tgctgttggg catcatcttt gggggcctcg cggtggtggc ggcggttgcg ctcgtctatg
2461 tgctgctgcg ccgcaggaag ggcaacacgc acgtctgggg tgcacagccc tgatgggagc
2521 agcttggctg tgagcaccag gccaagactc ctgagaacag gcagcccagt cctgcgactc
2581 ccgcatcccc aggaccagac acctgggacc tggatacttg atacctgggc atttaacccc
2641 ctactctgtc atctcagacc ccaggcagga ggcccagtgt tccaacaccc aagccccgtg
2701 ctagcagcgc tccgtgctct tccccaaata ctcacggctc taattcccca aacctgaaac
2761 ttcataccct gggattctaa tacctatgtc ctgagccctg acactcccac acctgagcct
2821 cagattccaa tagctcactc cctagagcct gacgccgggg cccctgaccc ctgagcctca
2881 gattccaata cctcactccc cagagcctga tgccggggcc cctgacccct gatctacgga
2941 ggcctgctcc cggaccgtgc gggcaccagt gcagtgctgc cttggttcct ggacccctgg
3001 gcccatcctg ggaccccaga tggggtaagg agaggcccca gaaccccaaa gcagacagcg
3061 agacccccag cggcagagac ctccctcggc actccaggct tataatttcg aactcttctg
3121 gaaggtcact caggaacacc ctccctgcct gtgcaaagag aaaacaagcg ccttgtttcc
3181 ttcaaaaaaa aaaaaaaaaa a
//