LOCUS BC033104 1066 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ADP-ribosylation factor 5, mRNA (cDNA clone MGC:45684
IMAGE:4862014), complete cds.
ACCESSION BC033104
VERSION BC033104.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1066)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1066)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 43 Row: h Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6995999.
FEATURES Location/Qualifiers
source 1..1066
/db_xref="H-InvDB:HIT000041804"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45684 IMAGE:4862014"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_49"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1066
/gene="ARF5"
/db_xref="GeneID:381"
/db_xref="HGNC:HGNC:658"
/db_xref="MIM:103188"
CDS 95..637
/gene="ARF5"
/codon_start=1
/product="ADP-ribosylation factor 5"
/protein_id="AAH33104.1"
/db_xref="GeneID:381"
/db_xref="HGNC:HGNC:658"
/db_xref="MIM:103188"
/translation="MGLTVSALFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVT
TIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQE
SADELQKMLQEDELRDAVLLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCA
TQGTGLYDGLDWLSHELSKR"
BASE COUNT 218 a 310 c 306 g 232 t
ORIGIN
1 ctcctcctgc tgctgctgcg ccccatcccc ccgcggccgg ccagttccag cccgcacccc
61 gcgtcggtgc ccgcgcccct ccccgggctc cgccatgggc ctcaccgtgt ccgcgctctt
121 ttcgcggatc ttcgggaaga agcagatgcg gattctcatg gttggcttgg atgcggctgg
181 caagaccaca atcctgtaca aactgaagtt gggggagatt gtcaccacca tcccaaccat
241 aggcttcaat gtagaaacag tggaatataa gaacatctgt ttcacagtct gggacgtggg
301 aggccaggac aagattcggc ctctgtggcg gcactacttc cagaacactc agggcctcat
361 ctttgtggtg gacagtaatg accgggagcg ggtccaagaa tctgctgatg aactccagaa
421 gatgctgcag gaggacgagc tgcgggatgc agtgctgctg gtatttgcca acaagcagga
481 catgcccaac gccatgcccg tgagcgagct gactgacaag ctggggctac agcacttacg
541 cagccgcacg tggtatgtcc aggccacctg tgccacccaa ggcacaggtc tgtacgatgg
601 tctggactgg ctgtcccacg agctgtcaaa gcgctaacca gccaggggca ggcccctgat
661 gcccggaagc tcctgcgtgc atccccggga tgaccagact cccggactcc tcaggcagtg
721 ccctttcctc ccacttttcc tcccccatag ccacaggcct ctgctcctgc tcctgcctgc
781 atgttctctc tgttgttgga gcctggagcc ttgctctctg ggcacagagg ggtccactct
841 cctgcctgct gggacctatg gaaggggctt cctggccaag gccccctctt ccagaggagg
901 agcagggatc tgggtttcct tttttttttc tgttttgggt gtactctagg ggccaggttg
961 ggagggggaa ggtgagggct tcgggtggtg ctataatgtg gcactggatc ttgagtaata
1021 aatttgctgt ggtttgtaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//