LOCUS BC033040 3533 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens solute carrier family 1 (neuronal/epithelial high
affinity glutamate transporter, system Xag), member 1, mRNA (cDNA
clone MGC:33786 IMAGE:5261168), complete cds.
ACCESSION BC033040
VERSION BC033040.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3533)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3533)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: f Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 66773029.
FEATURES Location/Qualifiers
source 1..3533
/db_xref="H-InvDB:HIT000041775"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33786 IMAGE:5261168"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3533
/gene="SLC1A1"
/gene_synonym="EAAC1"
/gene_synonym="EAAT3"
/db_xref="GeneID:6505"
/db_xref="HGNC:HGNC:10939"
/db_xref="MIM:133550"
CDS 240..1814
/gene="SLC1A1"
/gene_synonym="EAAC1"
/gene_synonym="EAAT3"
/codon_start=1
/product="solute carrier family 1 (neuronal/epithelial
high affinity glutamate transporter, system Xag), member
1"
/protein_id="AAH33040.1"
/db_xref="GeneID:6505"
/db_xref="HGNC:HGNC:10939"
/db_xref="MIM:133550"
/translation="MGKPARKGCEWKRFLKNNWVLLSTVAAVVLGITTGVLVREHSNL
STLEKFYFAFPGEILMRMLKLIILPLIISSMITGVAALDSNVSGKIGVRAVVYYFCTT
LIAVILGIVLVVSIKPGVTQKVGEIARTGSTPEVSTVDAMLDLIRNMFPENLVQACFQ
QYKTKREEVKPPSDPEMNMTEESFTAVMTTAISKNKTKEYKIVGMYSDGINVLGLIVF
CLVFGLVIGKMGEKGQILVDFFNALSDATMKIVQIIMCYMPLGILFLIAGKIIEVEDW
EIFRKLGLYMATVLTGLAIHSIVILPLIYFIVVRKNPFRFAMGMAQALLTALMISSSS
ATLPVTFRCAEENNQVDKRITRFVLPVGATINMDGTALYEAVAAVFIAQLNDLDLGIG
QIITISITATSASIGAAGVPQAGLVTMVIVLSAVGLPAEDVTLIIAVDWLLDRFRTMV
NVLGDAFGTGIVEKLSKKELEQMDVSSEVNIVNPFALESTILDNEDSDTKKSYVNGGF
AVDKSDTISFTQTSQF"
BASE COUNT 988 a 757 c 806 g 982 t
ORIGIN
1 agcggaggag ccgggcgcgc ctgccacgca aaactaccgg gctggcaggg cggcgggcgc
61 ggtgcgcgat cccgggtggc ggcggcaacg gcggtggtga cggcggcgac tgcagcggcc
121 ggctctcacc tctcccctgt gcacccgcat ctcgccgcgc cgccgagcag ccagcagtcc
181 ccgggtcgcc cagcccacgc gcgcacggcc gagcccagcg cacaatagcg gcgacagcca
241 tggggaaacc ggcgaggaaa ggatgcgagt ggaagcgctt cctgaagaat aactgggtgt
301 tgctgtccac cgtggccgcg gtggtgctag gcattaccac aggagtcttg gttcgagaac
361 acagcaacct ctcaactcta gagaaattct actttgcttt tcctggagaa attctaatgc
421 ggatgctgaa actcatcatt ttgccattaa ttatatccag catgattaca ggtgttgctg
481 cactggattc caacgtatcc ggaaaaattg gtgtgcgcgc tgtcgtgtat tatttctgta
541 ccactctcat tgctgttatt ctaggtattg tgctggtggt gagcatcaag cctggtgtca
601 cccagaaagt gggtgaaatt gcgaggacag gcagcacccc tgaagtcagt acggtggatg
661 ccatgttaga tctcatcagg aatatgttcc ctgagaatct tgtccaggcc tgttttcagc
721 agtacaaaac taagcgtgaa gaagtgaagc ctcccagcga tccagagatg aacatgacag
781 aagagtcctt cacagctgtc atgacaactg caatttccaa gaacaaaaca aaggaataca
841 aaattgttgg catgtattca gatggcataa acgtcctggg cttgattgtc ttttgccttg
901 tctttggact tgtcattgga aaaatgggag aaaagggaca aattctggtg gatttcttca
961 atgctttgag tgatgcaacc atgaaaatcg ttcagatcat catgtgttat atgccactag
1021 gtattttgtt cctgattgct gggaagatca tagaagttga agactgggaa atattccgca
1081 agctgggcct ttacatggcc acagtcctga ctgggcttgc aatccactcc attgtaattc
1141 tcccgctgat atatttcata gtcgtacgaa agaacccttt ccgatttgcc atgggaatgg
1201 cccaggctct cctgacagct ctcatgatct cttccagttc agcaacactg cctgtcacct
1261 tccgctgtgc tgaagaaaat aaccaggtgg acaagaggat cactcgattc gtgttacccg
1321 ttggtgcaac aatcaacatg gatgggactg cgctctatga agcagtggca gcggtgttta
1381 ttgcacagtt gaatgacctg gacttgggca ttgggcagat catcaccatc agtatcacgg
1441 ccacatctgc cagcatcgga gctgctggcg tgccccaggc tggcctggtg accatggtga
1501 ttgtgctgag tgccgtgggc ctgcccgccg aggatgtcac cctgatcatt gctgtcgact
1561 ggctcctgga ccggttcagg accatggtca acgtccttgg tgatgctttt gggacgggca
1621 ttgtggaaaa gctctccaag aaggagctgg agcagatgga tgtttcatct gaagtcaaca
1681 ttgtgaatcc ctttgccttg gaatccacaa tccttgacaa cgaagactca gacaccaaga
1741 agtcttatgt caatggaggc tttgcagtag acaagtctga caccatctca ttcacccaga
1801 cctcacagtt ctagggcccc tggctgcaga tgactggaaa caaggaagga catttccgtg
1861 agagtcatct caaacactgc ttaaggaaaa gagaaacact aatggccaag tgtacatttg
1921 atttgatata cagacctcca gattattttc tatatttgga ttcacagcct ttgcgctctg
1981 ggttttggga tttgggtgtg gggtaagttg aagggaaatc aatttaaagg aaagttctat
2041 tatctgggtt ttagaaattc tataagagac aaagtttgga agtacataaa gtaataactg
2101 ttagaattag gtaatggata tgaaagagaa aatgctttct catgcataga caagtgtttt
2161 gggtttttaa aaaaaatatt ctgtcattgg ttacaaattt ttactcaggc tttctattgg
2221 catggatttc ctttgacctc tcactttttt ataaattata atgcatctaa accacctgtc
2281 cccagttaat gtgccaaaat gtcaattttt aacttatctc cagccaattt caaagaaaac
2341 agaccagcat agttctgcaa taacagtttt aagatgggca tagggtttgg aagaaagaga
2401 gaaggattct tttttcaatg tactgtattg ggacgctggt aactgttaac ccagtgttca
2461 gcatagagct atatatatat atatatgtat atatttatta ttttcatata atttgccaga
2521 cagagatcag aattgaaccg tcaatgtgaa ataaagagtt ctccttgtac ttgaataata
2581 accacgattc caacccaggt ctgctttggg gcttatcaga actcctttct aaggagcact
2641 agaatgagaa atcatgttgt tcgatcgttt cacatctgta tatcagctct aaagcagaga
2701 tgtattatgg tgatactcca aggtggcata gccattcatt tacaacttcc agatttgagc
2761 tgcctggagg gaatccatat cagctctgca taagattata tacaaagctg tcactcacaa
2821 aaggctggat gtgctttcat ccaactggaa ggctttattc ttccaagttc attcatactc
2881 aaagaggcca gtactttgcc atccttgcac tttctgttat cagggcccaa ataacagtgg
2941 caagctacca actaagttgt attttaataa agattccatg ggttgaacaa gccacgttgc
3001 agaaaaagag cttcccctaa cctgggttgt tgcagagtaa atcccacgac ataagctggt
3061 atcactggtt cgggggaaat agttccattc tatgactctt gtctcctcct ccaggaggac
3121 tgttctaact agtaatcttg gccctattca ttacatcctc tgcttgtcat tctgctaatt
3181 tatgaagata gtttattata gtctgtactt cagttctcat cttgtaaata atgcttaaca
3241 taaacttgta cttacactga aatccaaaat agtcatgttt ctgcagtatt ctgtagccaa
3301 cttaaacctg tgctttcatg tttaagaaat gagaaattgt gccaaagata gcagaagagt
3361 agataagtgc tcagtattga cgacctacat ctgaaatcta caacataatg atactgaatt
3421 gttatgtaaa catcataaat agtaaataat gattcaatgt gaattttaaa atgcaaatat
3481 tgctattgtt tataggaaat aaatctaaat ataaacgaaa aaaaaaaaaa aaa
//