LOCUS BC033033 1184 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens chromosome 6 open reading frame 81, mRNA (cDNA clone
MGC:33273 IMAGE:5268250), complete cds.
ACCESSION BC033033
VERSION BC033033.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1184)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1184)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC033033.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: m Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37059793.
FEATURES Location/Qualifiers
source 1..1184
/db_xref="H-InvDB:HIT000041770"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33273 IMAGE:5268250"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1184
/gene="C6orf81"
/gene_synonym="FLJ25390"
/db_xref="GeneID:221481"
/db_xref="HGNC:HGNC:21099"
CDS 28..1131
/gene="C6orf81"
/gene_synonym="FLJ25390"
/codon_start=1
/product="chromosome 6 open reading frame 81"
/protein_id="AAH33033.1"
/db_xref="GeneID:221481"
/db_xref="HGNC:HGNC:21099"
/translation="MGKSIPQYLGQLDIRKSVVSLATGAGAIYLLYKAIKAGIKCKPP
LCSNSPICIARECPGPGERALPQEAPAPEASAVGGPKGLAVERERHGRDSGELRRLLN
SLECKQDEYAKSMILHSITRCVYLLEAEASACTTDDIVLLGYMLDDKDNSVKTQALNT
LKAFSGIRKFRLKIQEHSIKVLELISTIWDTELHIAGLRLLNNLPLPDYVHPQLRRVM
PALMEILQSDYILAQVQAVRLLSYLAQKNDLLYDILNCQVHSNFLNLFQPTQSGSLLY
EVLVFAERLSEGRNAPHYHVVKWHYNEQSLHESLFGEESRLADRLLALVIHPEEDVQI
QACKVIVSLQYPQDLRARPSSCQPSRSYFKNTE"
BASE COUNT 307 a 346 c 302 g 229 t
ORIGIN
1 acctgggccc agggcaacac tgaagacatg ggcaagagca tcccccaata cctggggcaa
61 ctggacatcc gcaaaagcgt agtcagcctg gccacaggcg ccggggcgat ctacctgctc
121 tacaaggcca tcaaggctgg cataaaatgc aaaccacccc tctgtagcaa ctcacccatc
181 tgcatcgccc gtgagtgtcc gggccctggg gagagggctc tgccccagga ggcacctgct
241 cccgaggcct ctgctgtggg agggcccaaa ggcctggcag tcgagcgaga gcggcacggg
301 cgggactcag gtgagctccg gaggctcctc aactctttgg agtgcaaaca ggatgagtac
361 gccaagagca tgatcctgca cagtatcact cgctgtgtgt acttgctgga ggctgaggcc
421 tctgcttgta ctacggatga catcgtgttg ctgggctaca tgctggatga caaggacaac
481 agtgtcaaaa cccaagctct gaatacactt aaagctttct ctggcatcag aaaattcagg
541 ctcaaaatcc aggaacactc catcaaagta ctcgaactga tctccaccat ctgggacacg
601 gaactgcaca ttgcgggcct cagactcctc aacaaccttc cactgcccga ctatgtgcat
661 ccacagctgc gacgggtgat gcctgccttg atggagatcc tgcagtcaga ctacatccta
721 gcacaggtgc aagccgtacg actgctgagc tacctggcac agaagaatga ccttctctat
781 gacattctca actgccaggt tcactccaac ttcctaaacc tgttccagcc cacacagtca
841 gggagtctcc tgtatgaggt actggtgttt gctgagcggc tgagtgaggg ccggaacgca
901 ccccactacc acgtggtgaa atggcattac aacgaacagt ccctgcatga atccctcttt
961 ggggaagagt cccgactggc agaccgacta cttgccctgg tcatccaccc tgaggaagat
1021 gttcagatcc aggcctgcaa ggtcattgtc agcctgcagt atccccagga cttgagagcc
1081 cggccctcct cctgccagcc cagtcgttcc tactttaaaa acacggaata aaattaagga
1141 gagccaataa atgagtatag gagagaaaca aaaaaaaaaa aaaa
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