LOCUS BC033029 3144 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens serine incorporator 1, mRNA (cDNA clone MGC:33018 IMAGE:4831122), complete cds. ACCESSION BC033029 VERSION BC033029.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3144) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3144) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (21-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC033029.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 47 Row: d Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34222115. FEATURES Location/Qualifiers source 1..3144 /db_xref="H-InvDB:HIT000041768" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:33018 IMAGE:4831122" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3144 /gene="SERINC1" /gene_synonym="KIAA1253" /gene_synonym="TDE1L" /gene_synonym="TMS-2" /db_xref="GeneID:57515" /db_xref="HGNC:HGNC:13464" CDS 71..1432 /gene="SERINC1" /gene_synonym="KIAA1253" /gene_synonym="TDE1L" /gene_synonym="TMS-2" /codon_start=1 /product="serine incorporator 1" /protein_id="AAH33029.1" /db_xref="GeneID:57515" /db_xref="HGNC:HGNC:13464" /translation="MGSVLGLCSMASWIPCLCGSAPCLLCRCCPSGNNSTVTRLIYAL FLLVGVCVACVMLIPGMEEQLNKIPGFCENEKGVVPCNILVGYKAVYRLCFGLAMFYL LLSLLMIKVKSSSDPRAAVHNGFWFFKFAAAIAIIIGAFFIPEGTFTTVWFYVGMAGA FCFILIQLVLLIDFAHSWNESWVEKMEEGNSRCWYAALLSATALNYLLSLVAIVLFFV YYTHPASCSENKAFISVNMLLCVGASVMSILPKIQESQPRSGLLQSSVITVYTMYLTW SAMTNEPETNCNPSLLSIIGYNTTSTVPKEGQSVQWWHAQGIIGLILFLLCVFYSSIR TSNNSQVNKLTLTSDESTLIEDGGARSDGSLEDGDDVHRAVDNERDGVTYSYSFFHFM LFLASLYIMMTLTNWYRYEPSREMKSQWTAVWVKISSSWIGIVLYVWTLVAPLVLTNR DFD" BASE COUNT 925 a 518 c 684 g 1017 t ORIGIN 1 aatctcggaa aggcgagaaa gaagctgtct ccatcttgtc tgtatccgct gctcttgtga 61 cgttgtggag atggggagcg tcctggggct gtgctccatg gcgagctgga taccatgttt 121 gtgtggaagt gccccgtgtt tgctatgccg atgctgtcct agtggaaaca actccactgt 181 aactagattg atctatgcac ttttcttgct tgttggagta tgtgtagctt gtgtaatgtt 241 gataccagga atggaagaac aactgaataa gattcctgga ttttgtgaga atgagaaagg 301 tgttgtccct tgtaacattt tggttggcta taaagctgta tatcgtttgt gctttggttt 361 ggctatgttc tatcttcttc tctctttact aatgatcaaa gtgaagagta gcagtgatcc 421 tagagctgca gtgcacaatg gattttggtt ctttaaattt gctgcagcaa ttgcaattat 481 tattggggca ttcttcattc cagaaggaac ttttacaact gtgtggtttt atgtaggcat 541 ggcaggtgcc ttttgtttca tcctcataca actagtctta cttattgatt ttgcacattc 601 atggaatgaa tcgtgggttg aaaaaatgga agaagggaac tcgagatgtt ggtatgcagc 661 cttgttatca gctacagctc tgaattatct gctgtcttta gttgctatcg tcctgttctt 721 tgtctactac actcatccag ccagttgttc agaaaacaag gcgttcatca gtgtcaacat 781 gctcctctgc gttggtgctt ctgtaatgtc tatactgcca aaaatccaag aatcacaacc 841 aagatctggt ttgttacagt cttcagtaat tacagtctac acaatgtatt tgacatggtc 901 agctatgacc aatgaaccag aaacaaattg caacccaagt ctactaagca taattggcta 961 caatacaaca agcactgtcc caaaggaagg gcagtcagtc cagtggtggc atgctcaagg 1021 aattatagga ctaattctct ttttgttgtg tgtattttat tccagcatcc gtacttcaaa 1081 caatagtcag gttaataaac tgactctaac aagtgatgaa tctacattaa tagaagatgg 1141 tggagctaga agtgatggat cactggagga tggggacgat gttcaccgag ctgtagataa 1201 tgaaagggat ggtgtcactt acagttattc cttctttcac ttcatgcttt tcctggcttc 1261 actttatatc atgatgaccc ttaccaactg gtacaggtat gaaccctctc gtgagatgaa 1321 aagtcagtgg acagctgtct gggtgaaaat ctcttccagt tggattggca tcgtgctgta 1381 tgtttggaca ctcgtggcac cacttgttct tacaaatcgt gattttgact gagtgagact 1441 tctagcatga aagtcccact ttgattattg cttatttgaa aacagtattc ccaacttttg 1501 taaagttgtg tatgtttttg cttcccatgt aacttctcca gtgttctggc atgaattaga 1561 ttttactgct tgtcattttg ttattttctt accaagtgca ttgatatgtg aagtagaatg 1621 aattgcagag gaaagtttta tgaatatggt gatgagttag taaaagtggc cactattggg 1681 cttattctct gctctatagt tgtgaaatga agagtgaaaa caaatttgtt tgactatttt 1741 aaaattatat tagaccttaa gctgttttag caagcattaa agcaaatgta tggctgcctt 1801 ttaaaatatt tgatgtgttg cctggcagga tactgcaaag aacatggttt attttaaaat 1861 ttataaacaa gtcacttaaa tgccagttgt ctgaaaaatc ttataaggtt ttacccttga 1921 tacggaattt acacaggtag ggagtgttta gtggacaata gtgtaggtta tggatggagg 1981 tgtcggtact aaattgaata acgagtaaat aatcttactt gggtagagat ggcctttgcc 2041 aacaaagtga actgttttgg ttgttttaaa ctcatgaagt atgggttcag tggaaatgtt 2101 tggaactctg aaggatttag acaaggtttt gaaaaggata atcatgggtt agaaggaagt 2161 gtttgaaagt cactttgaaa gttagttttg ggccagcacg gtagctcacc cttgtaatcc 2221 cagcactttg ggaggctgag gtgggtagat tacttgagcc caggaattca agaccagcct 2281 gggcaacatg gtgaaaccct gtttctataa aaaataatct gggctttgta gcatatgcct 2341 gtggtcccag ctactgagga ggctgaggtg ggaggattgc ttgagcccag gaggcagagg 2401 ttgcagtgag ccaaggtcac gtcactgcac tctagcctgg gcaacagagt aagacaaaaa 2461 aatatatata tattgaaaat caaaggaggc aaaattttga cagggaagga agtaactgca 2521 aaacactagg ctttagtagg tacttatata aaatctagtc cagttctctc atttaaaaaa 2581 atgaagacac tgaagtacag acttaaatag ctcagatagc taattaggaa atttcaagtt 2641 ggccaataat agcattctct ctgacattta aaaataattt ctattcaaaa tacatgcata 2701 attgatttta cacctcatta ctggtggata atttatgtga tgtggattgc tggtgtccag 2761 catgacccat aaacaggtca gaagaatgat ggaatgtttt agaataaact cctgcttata 2821 gtatactaca cagttcaaaa gatgtttaaa atgcttttgt atttactgcc atgtaattga 2881 aatatataga ttattgtaac ctttcaacct gaaaatcaag cagtatgaga gtttagttat 2941 ttgtatgtgt cactagtgtc taatgaagct tttaaaatct acaatttctt ctttaaaaat 3001 atttattaat gtgaatggaa tataacaatt cagcttaatt ccccaacctt attctgtgtg 3061 tagacattgt attccacaat tttgaatggc tgtgttttac ctctaaataa atgaattcag 3121 agaaagtgaa aaaaaaaaaa aaaa //