LOCUS BC033028 3657 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens eukaryotic translation initiation factor 4E nuclear
import factor 1, mRNA (cDNA clone MGC:32981 IMAGE:4837225),
complete cds.
ACCESSION BC033028
VERSION BC033028.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3657)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3657)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: d Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 10947034.
FEATURES Location/Qualifiers
source 1..3657
/db_xref="H-InvDB:HIT000041767"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32981 IMAGE:4837225"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3657
/gene="EIF4ENIF1"
/gene_synonym="4E-T"
/gene_synonym="Clast4"
/gene_synonym="FLJ21601"
/db_xref="GeneID:56478"
/db_xref="HGNC:HGNC:16687"
/db_xref="MIM:607445"
CDS 173..3130
/gene="EIF4ENIF1"
/gene_synonym="4E-T"
/gene_synonym="Clast4"
/gene_synonym="FLJ21601"
/codon_start=1
/product="eukaryotic translation initiation factor 4E
nuclear import factor 1"
/protein_id="AAH33028.1"
/db_xref="GeneID:56478"
/db_xref="HGNC:HGNC:16687"
/db_xref="MIM:607445"
/translation="MDRRSMGETESGDAFLDLKKPPASKCPHRYTKEELLDIKELPHS
KQRPSCLSEKYDSDGVWDPEKWHASLYPASGRSSPVESLKKELDTDRPSLVRRIVDPR
ERVKEDDLDVVLSPQRRSFGGGCHVTAAVSSRRSGSPLEKDSDGLRLLGGRRIGSGRI
ISARTFEKDHRLSDKDLRDLRDRDRERDFKDKRFRREFGDSKRVFGERRRNDSYTEEE
PEWFSAGPTSQSETIELTGFDDKILEEDHKGRKRTRRRTASVKEGIVECNGGVAEEDE
VEVILAQEPAADQEVPRDAVLPEQSPGDFDFNEFFNLDKVPCLASMIEDVLGEGSVSA
SRFSRWFSNPSRSGSRSSSLGSTPHEELERLAGLEQAILSPGQNSGNYFAPIPLEDHA
ENKVDILEMLQKAKVDLKPLLSSLSANKEKLKESSHSGVVLSVEEVEAGLKGLKVDQQ
VKNSTPFMAEHLEETLSAVTNNRQLKKDGDMTAFNKLVSTMKASGTLPSQPKVSRNLE
SHLMSPAEIPGQPVPKNILQELLGQPVQRPASSNLLSGLMGSLEPTTSLLGQRAPSPP
LSQVFQTRAASADYLRPRIPSPIGFTPGPQQLLGDPFQGMRKPMSPITAQMSQLELQQ
AALEGLALPHDLAVQAANFYQPGFGKPQVDRTRDGFRNRQQRVTKSPAPVHRGNSSSP
APAASITSMLSPSFTPTSVIRKMYESKEKSKEEPASGKAALGDSKEDTQKASEENLLS
SSSVPSADRDSSPTTNSKLSALQRSSCSTPLSQANRYTKEQDYRPKATGRKTPTLASP
VPTTPFLRPVHQVPLVPHVPMVRPAHRLHPGLVQRMLAQGVHPQHLPSLLQTGVLPPG
MDLSHLQGISGPILGQPFYPLPAASHPLLNPRPGTPLHLAMVQQQLQRSVLHPPGSGS
HAAAVSVQTTPQNVPSRSGLPHMHSQLEHRPSQRSSSPVGLAKWFGSDVLQQPLPSMP
AKVISVDELEYRQ"
BASE COUNT 959 a 922 c 943 g 833 t
ORIGIN
1 agcggggggg gtagccggcg ggctggctgg cggggaccga gccgccgggc cggggaggac
61 ggctgcgggc ctgcgctagc tccagcttga agcgcccggg ccgggagatt cggcctccct
121 cctccctgcg gccggccgcc cctcagtgca gagcattgta gaccaaggag ccatggatag
181 gagaagtatg ggtgaaacag aaagtggaga tgctttcctt gacctgaaga agcctcctgc
241 ctccaaatgc ccccatcgct atacaaaaga agaactcttg gatataaaag aactccccca
301 ttccaaacag aggccttcat gcctttctga aaaatatgac agtgatggtg tctgggaccc
361 tgagaagtgg catgcctctc tctacccagc ttcagggcgg agctcaccag tggaaagtct
421 gaagaaagag ttggatacag accggccttc cctggtgcgc aggatagtag atccacgaga
481 gcgtgtgaaa gaagatgact tagatgttgt tctcagccct cagagacgga gctttggagg
541 gggctgccac gtgacagccg ctgttagctc ccggcgctca ggaagtccat tagagaaaga
601 tagtgatggg cttcgtctgc ttggtggacg taggattggc agtgggagga taatctctgc
661 ccggaccttt gagaaggatc accgtcttag cgataaggac ctgcgggact tgagagacag
721 agaccgagag agggacttca aggacaagcg tttcaggaga gagtttggag atagtaagcg
781 tgtctttggt gagcgtagaa gaaatgattc ttacacagaa gaagaaccag agtggttctc
841 tgctggaccc acaagtcagt ctgaaaccat cgaactgact ggctttgatg ataagatact
901 agaagaagat cacaaaggga gaaaaagaac aaggcgacgg acagcctctg tgaaggaagg
961 tatagtagag tgcaatggag gagtggccga agaggatgaa gtggaggtca tccttgcaca
1021 ggagcctgcg gctgatcagg aagtgccaag ggatgctgtc ttgcctgagc agtccccagg
1081 agactttgac tttaatgagt tctttaacct tgataaggtg ccatgcttgg cttcgatgat
1141 agaagatgtt ttgggagaag ggtcagtctc tgccagtcgg ttcagtaggt ggttctctaa
1201 cccgagcaga tcaggaagcc gatccagcag tcttgggtca acaccacatg aagagctaga
1261 gagacttgca ggtctggagc aagccatcct ctctcctgga cagaactcgg ggaattactt
1321 tgctcctata ccattggaag accatgctga aaataaagtg gatattttag aaatgctaca
1381 gaaagccaaa gtggatttga aacctcttct ttccagcctt tctgcaaata aagaaaaact
1441 taaagaaagc tcacattcag gggttgtgct ttcagtggag gaggtagaag caggtctgaa
1501 gggcttgaag gttgaccagc aagtgaagaa ttcaactccc ttcatggcag aacacctaga
1561 agagaccttg agtgccgtaa ccaacaatcg acaactgaag aaagacggag acatgactgc
1621 gttcaacaag ctagtgagca caatgaaggc aagtgggact ttgccttctc agcccaaagt
1681 cagccgaaac cttgaaagcc atttgatgtc ccctgctgag attccaggcc agcctgtccc
1741 taagaacatc ctgcaggaac ttctgggtca accagttcag agacctgctt cttccaatct
1801 tctgagtggc cttatgggga gcttggagcc tacaacatct ttactgggcc aaagagcacc
1861 ctctcctccc ttgtcacagg tgtttcaaac tcgagcagcc tcagctgact accttcgccc
1921 aagaatacca tcaccaattg gtttcacacc aggaccacag cagctactcg gagatccatt
1981 ccaaggcatg cgcaaaccca tgagccccat cacagcccag atgagccagc tggagttgca
2041 acaggcagct ttagaagggc tggccttgcc acatgacctt gctgtacagg cagcaaactt
2101 ctaccagcct ggttttggca aaccacaggt ggacagaacc agagatggat tcagaaacag
2161 gcaacagcga gtgaccaagt caccagcacc cgtgcatcga gggaattcct cttcccctgc
2221 ccctgctgcc tccatcacaa gcatgctttc tccttccttt acccctacct cagtgattcg
2281 taagatgtac gagagcaaag agaaaagcaa ggaggagcca gcatctggaa aagcagctct
2341 tggtgacagt aaagaggata ctcagaaggc cagtgaagaa aacctcctgt catccagctc
2401 tgtacccagt gccgatcgag actcttctcc cactacaaat tccaaactgt cagcattaca
2461 gaggtcttcg tgttccaccc cactgtccca ggccaaccgt tacaccaaag aacaagatta
2521 tcgacctaaa gcaactggga gaaaaacacc caccttggca tccccagttc ctacaacacc
2581 ttttctccgc cctgtccacc aagttcccct tgtcccccat gtccctatgg ttaggcctgc
2641 tcaccggctt cacccagggt tggtacagag gatgctggcc cagggagtac atccacagca
2701 tcttccaagt ttgctccaaa ctggtgtgct tcctcctggg atggacttga gtcatttaca
2761 gggaatatct ggccccatcc tgggtcagcc cttttaccct ttacctgctg ctagtcaccc
2821 tctcttaaac cctcgtcctg gaacacctct gcatctggca atggtgcaac agcagctaca
2881 gcgctcagtt ctgcatcctc caggctctgg ttcccatgca gcagctgtca gcgttcagac
2941 aacccctcag aacgtgccca gccggtcagg cctgccccac atgcactccc agctggagca
3001 tcgccccagc cagaggagca gctcccctgt gggccttgcc aaatggtttg gctcagatgt
3061 gctacagcaa cccctgccct ccatgcccgc caaagttatc agtgtagatg aattggaata
3121 ccgacagtga gcagggcagg cagactcaac taagcccgga cctgtggtgg cacactgggc
3181 aggaccctgc ttcatctcgg gttggtttat gggcttttac tttggagcac tctgtgtgaa
3241 gctgtttggt ggaacccatg catctggtgt ggtccgcgtt atgatggaag gatcttaacc
3301 agtcgagtgg agtgtacatt gtctgaatac aggatgcaca atgttgtcaa tcctggaaat
3361 ggtctttctt ttttgtaaga tatgtgaatg aagtgttggt gtcctcacca agaggtggca
3421 cctaagggtt ctgaggaaat aaatgtatag acccttatgt acagacctgt gtataaacaa
3481 cttttgtata tacatatagg atagcttttt tgaactatac agctgtacat aaaagtagct
3541 gatattagtt aggcctgtgt caacagtttg gatttttttc acttgtacat ttgggatttt
3601 cttttggttg attaaaattg catatgctaa gtgtgtgaat gaaaaaaaaa aaaaaaa
//