LOCUS BC033025 2204 bp mRNA linear HUM 21-JUL-2005
DEFINITION Homo sapiens phosphatidic acid phosphatase type 2 domain containing
1B, mRNA (cDNA clone MGC:32924 IMAGE:5267610), complete cds.
ACCESSION BC033025
VERSION BC033025.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2204)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2204)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: l Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40316920.
FEATURES Location/Qualifiers
source 1..2204
/db_xref="H-InvDB:HIT000041765"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32924 IMAGE:5267610"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2204
/gene="PPAPDC1B"
/gene_synonym="HTPAP"
/db_xref="GeneID:84513"
CDS 205..876
/gene="PPAPDC1B"
/gene_synonym="HTPAP"
/codon_start=1
/product="PPAPDC1B protein"
/protein_id="AAH33025.1"
/db_xref="GeneID:84513"
/translation="MWLYRNPYVEAEYFPTKPMFVIAFLSPLSLIFLAKFLKKADTRD
SRQACLAASLALALNGVFTNTIKLIVGRPRPDFFYRCFPDGLAHSDLMCTGDKDVVNE
GRKSFPSGHSSFAFAGLAFASFYLAGKLHCFTPQGRGKSWRFCAFLSPLLFAAVIALS
RTCDYKHHWQDVLVGSMIGMTFAYVCYRQYYPPLTDAECHKPFQDKLVLSTAQKPGDS
YCFDI"
BASE COUNT 587 a 526 c 481 g 610 t
ORIGIN
1 agcgggttcg cggccttcct gtaagaaaga tccacggccg ggcccgggcg gccccgcttc
61 ccaggcaggc gggcggcacg gggcggcggg tcgggcagtg gggaagcggg gaggaagcca
121 ggcgacctgc tctgcgcttc tttgttcccc tctagggtga cggagctgct ccccccgttc
181 cagagactca tccagccgga ggagatgtgg ctctaccgga acccctacgt ggaggcggag
241 tatttcccca ccaagccgat gtttgttatt gcatttctct ctccactgtc tctgatcttc
301 ctggccaaat ttctcaagaa ggcagacaca agagacagca gacaagcctg cctggctgcc
361 agccttgccc tggctctgaa tggcgtcttt accaacacaa taaaactgat cgtagggagg
421 ccacgcccag atttcttcta ccgctgcttc cctgatgggc tagcccattc tgacttgatg
481 tgtacagggg ataaggacgt ggtgaatgag ggccgaaaga gcttccccag tggacattct
541 tcctttgcat ttgctggtct ggcctttgcg tccttctacc tggcagggaa gttacactgc
601 ttcacaccac aaggccgtgg gaaatcttgg aggttctgtg cctttctgtc acctctactt
661 tttgcagctg tgattgcact gtcccgcaca tgtgactaca agcatcactg gcaagatgta
721 ctagttggat ccatgattgg aatgacattt gcctatgtct gctatcggca gtattatcct
781 cctctgactg atgcagaatg ccataaacca tttcaagaca aacttgtact ttccactgca
841 cagaagcctg gggattctta ttgttttgat atttaaaaat tgaatctggc cgggcgtggt
901 ggctcatgcc tgtaatccca acactttggg aggctgagga gggtggatca cctgaggtca
961 ggaccagcct ggccaacatg gtgaaccctg tctctactaa aaatacaaaa attagccagg
1021 agttgtgtgc cgtaatccca gctacctggg aggctgaggt aggagaattg cttgaacctg
1081 ggagctggag gttccagtga gccgagatcg caccactgca ctccagccta ggcaacagag
1141 tgagacccca tctcaaaaaa aaaaaaaaaa ttgaatctat ctcaatagag aacaggtgaa
1201 ctagccctcc taaccggacc atgcacaaga caagaaattc tagccttttt ttccccttcc
1261 aaggtgcaag tgaggacata agccacactg tattctgcct ccaaatgatt acacactttt
1321 gcccctgctc atctatcttg aggagttacg gttcttttcc actactgtat gccacatgtt
1381 ctagtaaaag gatctttcaa aggtgtccaa caccttatga atctggtcta tcagattaat
1441 atctgaagat ctacagtgtt tttacattta atttaaatgc cattcttaga aggatcttgt
1501 cacaaagaag cctttacata gccccacctt gtctcagaag ctagagttca ttatcaaaac
1561 ttaatttcca tttcatatag ctcaaaatct taaaatctag ggcatggcca actaaattac
1621 tttgattctg tttaccttct ctgatgacaa ttccatcaag ccttaaatag gaaaatgtcg
1681 aatctagggt aatttatcac ttttgtgtgc atcttatctg agtccagcca tctggtactg
1741 ctgtgcattt tgaacaccgt gggcataaac aatttgttga attactaagt gaaaacaata
1801 ataaagaaga aaatggtcag gagtgtggtt tcagcactac taacagatga ctgtttctac
1861 ctcatttgac cataactgta cttgtgagct tctttccttc cattcatgac tgaagatctg
1921 ctcaaatgca ccaacactgc caagtgacta aggtagaaaa gaaaaatgac aggtatcgtc
1981 atctgaagga cagatgaatc tttttctgcc ccttcttcac aatggaatat aaggaacaat
2041 tatgggatgt catcagaatg gatgccatag gacctacagc tccctttctc tttattgtga
2101 ttatacttta aatatgacat tgtcttttat gtgtatgttc ctatattttc aatgtatctt
2161 tttccttcag taaacctgat attcaaacaa aaaaaaaaaa aaaa
//