LOCUS BC033001 3638 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens SECIS binding protein 2-like, mRNA (cDNA clone MGC:26224 IMAGE:4825784), complete cds. ACCESSION BC033001 VERSION BC033001.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3638) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3638) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (21-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC033001.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 33 Row: l Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 60685226. FEATURES Location/Qualifiers source 1..3638 /db_xref="H-InvDB:HIT000041754" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:26224 IMAGE:4825784" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3638 /gene="SECISBP2L" /db_xref="GeneID:9728" /db_xref="HGNC:HGNC:28997" CDS 200..3505 /gene="SECISBP2L" /codon_start=1 /product="SECISBP2L protein" /protein_id="AAH33001.1" /db_xref="GeneID:9728" /db_xref="HGNC:HGNC:28997" /translation="MDRAPTEQNVKLSAEVEPFIPQKKSPDTFMIPMALPNDNGSVSG VEPTPIPSYLITCYPFVQENQSNRQFPLYNNDIRWQQPNPNPTGPYFAYPIISAQPPV STEYTYYQLMPAPCAQVMGFYHPFPTPYSNTFQAANTVNAITTECTERPSQLGQVFPL SSHRSRNSNRGSVVPKQQLLQQHIKSKRPLVKNVATQKETNAAGPDSRSKIVLLVDAS QQTDFPSDIANKSLSETTATMLWKSKGRRRRASHPTAESSSEQGASEADIDSDSGYCS PKHSNNQPAAGALRNPDSGTMNHVESSMCAGGVNWSNVTCQATQKKPWMEKNQTFSRG GRQTEQRNNSQVGFRCRGHSTSSERRQNLQKRPDNKHLSSSQSHRSDPNSESLYFEDE DGFQELNENGNAKDENIQQKLSSKVLDDLPENSPINIVQTPIPITTSVPKRAKSQKKK ALAAALATAQEYSEISMEQKKLQEALSKAAGKKNKTPVQLDLGDMLAALEKQQQAMKA RQITNTRPLSYTVVTAASFHTKDSTNRKPLTKSQPCLTSFNSVDIASSKAKKGKEKEI AKLKRPTALKKVILKEREEKKGRLTVDHNLLGSEEPTEMHLDFIDDLPQEIVSQEDTG LSMPSDTSLSPASQNSPYCMTPVSQGSPASSGIGSPMASSTITKIHSKRFREYCNQVL CKEIDECVTLLLQELVSFQERIYQKDPVRAKARRRLVMGLREVTKHMKLNKIKCVIIS PNCEKIQSKGGLDEAFYNVIAMAREQEIPFVFALGRKALGRCVNKLVPVSVVGIFNYF GAESLFNKLVELTEEARKAYKDMVAAMEQEQAEEALKNVKKVPHHMGHSRNPSAASAI SFCSVISEPISEVNEKEYETNWRNMVETSDGLEASENEKEVSCKHSTSEKPSKLPFDT PPIGKQPSLVATGSTTSATSAGKSTASDKEEVKPDDLEWASQQSTETGSLDGSCRDLL NSSITSTTSTLVPGMLEEEEDEDEEEEEDYTHEPISVEVQLNSRIESWVSETQRTMET LQLGKTLNGSEEDNVEQSGEEEAEAPEVLEPGMDSEAWTADQQASPGQQKSSNCSSLN KEHSDSNYTTQTT" BASE COUNT 1180 a 804 c 816 g 838 t ORIGIN 1 gaagctgcca ccgcctcctc catctcccgg agctggagcc gcctcctcgg ccagtggcgt 61 agccgaatcg gtgtcgcggc cagccagata ggggcggagg tccggaaccc agtctggacc 121 cgagcggggg gccatggaga aagcggcccg aggcgctgtt tacaccgact agcgcgggcc 181 cgttgcggct gcaggcacca tggaccgagc ccccacggag cagaatgtca agctgtcagc 241 tgaggtggag ccatttattc cccagaagaa gagtcctgat acatttatga tccctatggc 301 tctcccaaat gataatggaa gtgtttctgg tgtggaacca actccaattc ccagctacct 361 gattacttgt tacccatttg tgcaggaaaa ccagtccaat agacagtttc ctttatataa 421 caatgatata cgatggcaac aacccaatcc aaaccctact ggaccatact ttgcctatcc 481 cattatatct gctcagccgc ctgtttctac agagtataca tattatcagc tgatgccagc 541 accatgtgcc caggttatgg gtttctatca tccttttcct acaccttact ccaacacctt 601 tcaggctgca aatactgtaa atgctatcac cacagaatgc actgagcgtc caagtcagct 661 tggacaggtc ttcccattgt ccagccatcg aagcagaaac agtaacagag gatcagtggt 721 cccaaaacaa cagcttttac aacagcacat aaaaagcaaa aggccgctgg tgaaaaatgt 781 agctactcag aaagaaacaa atgcggcagg tcctgatagt cgatcaaaaa ttgtgcttct 841 ggtagatgct tcacagcaaa ctgatttccc atcagatatc gctaacaagt ctctctcaga 901 gaccactgca acaatgctct ggaagtccaa gggcaggaga agaagagcat cccaccctac 961 tgctgaatct tctagtgagc agggggctag tgaagccgac attgacagtg atagtggtta 1021 ctgcagtccc aaacacagca acaaccagcc tgcagcaggg gctttgagaa atcctgattc 1081 tgggaccatg aatcatgtgg aatcatctat gtgtgcaggt ggtgtaaatt ggtccaatgt 1141 aacttgccag gcaactcaga aaaaaccttg gatggaaaaa aatcagacat tttctagagg 1201 tggaaggcaa actgaacaaa gaaataattc acaggttgga ttcagatgcc gaggacacag 1261 tacttcctca gaaagaagac agaatttgca aaagagacca gataataagc atttaagctc 1321 tagtcaatcc catagaagcg atccaaattc tgagtcttta tattttgagg atgaagatgg 1381 gtttcaagaa ctaaatgaga atggaaatgc taaggatgag aatattcaac aaaaactttc 1441 ttctaaagta ttggatgatt tacctgaaaa ctcaccaatc aatatagttc agactccaat 1501 tcctattacc acctcagttc ccaaacgtgc aaaaagtcag aagaagaaag ctttagcagc 1561 agcccttgcc acagctcaag agtattcaga aataagtatg gagcaaaaaa aattacagga 1621 agctttatca aaagcagctg gaaaaaagaa taaaacacct gtgcagctag atttagggga 1681 catgttagct gctctggaaa aacaacagca agcaatgaaa gcacggcaaa ttactaacac 1741 cagacctctg tcatatacag tggttactgc agcttctttt cacactaaag actctactaa 1801 tagaaaacct ttaaccaaaa gtcagccctg tttgacatcc tttaattctg tggacattgc 1861 ttcttctaaa gcaaaaaaag gaaaagagaa ggaaattgca aaactaaaac gacccacagc 1921 acttaaaaag gttattttaa aagaaagaga ggaaaagaag gggcgcttaa ctgtggacca 1981 caatcttttg ggatccgagg aaccaacaga aatgcactta gattttattg atgacttgcc 2041 acaggagatt gtttcccagg aagatactgg actaagcatg cccagtgata cttcactctc 2101 tccagcaagt cagaactctc catactgtat gacacctgtg tcacaaggct ctcctgctag 2161 ttctggaata ggcagtccaa tggcatcttc aacaataacc aaaatccaca gcaaaagatt 2221 tagagagtat tgtaatcagg ttctttgtaa agagattgat gaatgtgtga ctcttcttct 2281 ccaagagctt gtcagtttcc aggaacgcat ctaccaaaaa gatcctgtaa gagcaaaagc 2341 aaggagacga ctcgttatgg gtctaagaga agttaccaaa catatgaagt taaacaagat 2401 caagtgtgtt ataatttctc caaactgtga aaaaatccag tcaaaaggtg gtctggatga 2461 ggctttctat aatgttatag ccatggcacg ggaacaagaa attccttttg tgtttgccct 2521 tggaaggaaa gctctaggac gctgtgtgaa caagctggtt cctgttagcg tagtgggaat 2581 cttcaactac tttggtgctg agagcctgtt taataaatta gtagaactca ctgaggaggc 2641 caggaaagca tataaagata tggttgcagc aatggaacag gagcaggctg aggaagcctt 2701 aaagaatgtg aagaaggtac cacaccacat gggacattct cggaatccct ctgcagcaag 2761 tgccatttct ttctgcagtg ttatttctga accgatctct gaagtaaatg aaaaggaata 2821 tgaaacaaat tggagaaaca tggtggaaac ttcagatgga ctggaagcat cagaaaatga 2881 gaaagaggta tcctgtaagc acagcacttc tgaaaaaccc agtaaacttc catttgacac 2941 acccccaatt ggtaagcagc catcattagt ggctacaggc agtactacct cagctacaag 3001 tgctgggaaa tccacagcaa gtgataaaga ggaagtgaag ccagatgacc tggaatgggc 3061 ctcacagcag agtacagaga ctggctcttt ggatggcagt tgccgagatc ttttgaattc 3121 ctccatcacc agcaccacca gcactcttgt acctggcatg cttgaagaag aagaagacga 3181 agatgaggag gaggaggaag attatactca tgaacccata tctgtagaag tgcagctcaa 3241 tagtagaatt gagtcttggg tctcagagac ccagagaact atggaaaccc ttcagcttgg 3301 aaaaaccctt aatggttctg aggaagacaa tgtagagcaa agtggagaag aggaagcaga 3361 ggcgcctgag gtgctggagc cagggatgga cagtgaggca tggactgctg accagcaggc 3421 cagtcctggg cagcagaagt ccagcaactg cagctcgctc aacaaagagc actctgattc 3481 taattacaca acgcaaacta cgtaactcag gaaatgtcgg ctctctatct ccagctgtgg 3541 aagggttgca gccattacct tttatgcttc atctcaacat tttgcactgt ccagtattta 3601 atatacgtat ttaattccca acaaaaaaaa aaaaaaaa //