LOCUS BC033001 3638 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens SECIS binding protein 2-like, mRNA (cDNA clone
MGC:26224 IMAGE:4825784), complete cds.
ACCESSION BC033001
VERSION BC033001.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3638)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3638)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC033001.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: l Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 60685226.
FEATURES Location/Qualifiers
source 1..3638
/db_xref="H-InvDB:HIT000041754"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26224 IMAGE:4825784"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3638
/gene="SECISBP2L"
/db_xref="GeneID:9728"
/db_xref="HGNC:HGNC:28997"
CDS 200..3505
/gene="SECISBP2L"
/codon_start=1
/product="SECISBP2L protein"
/protein_id="AAH33001.1"
/db_xref="GeneID:9728"
/db_xref="HGNC:HGNC:28997"
/translation="MDRAPTEQNVKLSAEVEPFIPQKKSPDTFMIPMALPNDNGSVSG
VEPTPIPSYLITCYPFVQENQSNRQFPLYNNDIRWQQPNPNPTGPYFAYPIISAQPPV
STEYTYYQLMPAPCAQVMGFYHPFPTPYSNTFQAANTVNAITTECTERPSQLGQVFPL
SSHRSRNSNRGSVVPKQQLLQQHIKSKRPLVKNVATQKETNAAGPDSRSKIVLLVDAS
QQTDFPSDIANKSLSETTATMLWKSKGRRRRASHPTAESSSEQGASEADIDSDSGYCS
PKHSNNQPAAGALRNPDSGTMNHVESSMCAGGVNWSNVTCQATQKKPWMEKNQTFSRG
GRQTEQRNNSQVGFRCRGHSTSSERRQNLQKRPDNKHLSSSQSHRSDPNSESLYFEDE
DGFQELNENGNAKDENIQQKLSSKVLDDLPENSPINIVQTPIPITTSVPKRAKSQKKK
ALAAALATAQEYSEISMEQKKLQEALSKAAGKKNKTPVQLDLGDMLAALEKQQQAMKA
RQITNTRPLSYTVVTAASFHTKDSTNRKPLTKSQPCLTSFNSVDIASSKAKKGKEKEI
AKLKRPTALKKVILKEREEKKGRLTVDHNLLGSEEPTEMHLDFIDDLPQEIVSQEDTG
LSMPSDTSLSPASQNSPYCMTPVSQGSPASSGIGSPMASSTITKIHSKRFREYCNQVL
CKEIDECVTLLLQELVSFQERIYQKDPVRAKARRRLVMGLREVTKHMKLNKIKCVIIS
PNCEKIQSKGGLDEAFYNVIAMAREQEIPFVFALGRKALGRCVNKLVPVSVVGIFNYF
GAESLFNKLVELTEEARKAYKDMVAAMEQEQAEEALKNVKKVPHHMGHSRNPSAASAI
SFCSVISEPISEVNEKEYETNWRNMVETSDGLEASENEKEVSCKHSTSEKPSKLPFDT
PPIGKQPSLVATGSTTSATSAGKSTASDKEEVKPDDLEWASQQSTETGSLDGSCRDLL
NSSITSTTSTLVPGMLEEEEDEDEEEEEDYTHEPISVEVQLNSRIESWVSETQRTMET
LQLGKTLNGSEEDNVEQSGEEEAEAPEVLEPGMDSEAWTADQQASPGQQKSSNCSSLN
KEHSDSNYTTQTT"
BASE COUNT 1180 a 804 c 816 g 838 t
ORIGIN
1 gaagctgcca ccgcctcctc catctcccgg agctggagcc gcctcctcgg ccagtggcgt
61 agccgaatcg gtgtcgcggc cagccagata ggggcggagg tccggaaccc agtctggacc
121 cgagcggggg gccatggaga aagcggcccg aggcgctgtt tacaccgact agcgcgggcc
181 cgttgcggct gcaggcacca tggaccgagc ccccacggag cagaatgtca agctgtcagc
241 tgaggtggag ccatttattc cccagaagaa gagtcctgat acatttatga tccctatggc
301 tctcccaaat gataatggaa gtgtttctgg tgtggaacca actccaattc ccagctacct
361 gattacttgt tacccatttg tgcaggaaaa ccagtccaat agacagtttc ctttatataa
421 caatgatata cgatggcaac aacccaatcc aaaccctact ggaccatact ttgcctatcc
481 cattatatct gctcagccgc ctgtttctac agagtataca tattatcagc tgatgccagc
541 accatgtgcc caggttatgg gtttctatca tccttttcct acaccttact ccaacacctt
601 tcaggctgca aatactgtaa atgctatcac cacagaatgc actgagcgtc caagtcagct
661 tggacaggtc ttcccattgt ccagccatcg aagcagaaac agtaacagag gatcagtggt
721 cccaaaacaa cagcttttac aacagcacat aaaaagcaaa aggccgctgg tgaaaaatgt
781 agctactcag aaagaaacaa atgcggcagg tcctgatagt cgatcaaaaa ttgtgcttct
841 ggtagatgct tcacagcaaa ctgatttccc atcagatatc gctaacaagt ctctctcaga
901 gaccactgca acaatgctct ggaagtccaa gggcaggaga agaagagcat cccaccctac
961 tgctgaatct tctagtgagc agggggctag tgaagccgac attgacagtg atagtggtta
1021 ctgcagtccc aaacacagca acaaccagcc tgcagcaggg gctttgagaa atcctgattc
1081 tgggaccatg aatcatgtgg aatcatctat gtgtgcaggt ggtgtaaatt ggtccaatgt
1141 aacttgccag gcaactcaga aaaaaccttg gatggaaaaa aatcagacat tttctagagg
1201 tggaaggcaa actgaacaaa gaaataattc acaggttgga ttcagatgcc gaggacacag
1261 tacttcctca gaaagaagac agaatttgca aaagagacca gataataagc atttaagctc
1321 tagtcaatcc catagaagcg atccaaattc tgagtcttta tattttgagg atgaagatgg
1381 gtttcaagaa ctaaatgaga atggaaatgc taaggatgag aatattcaac aaaaactttc
1441 ttctaaagta ttggatgatt tacctgaaaa ctcaccaatc aatatagttc agactccaat
1501 tcctattacc acctcagttc ccaaacgtgc aaaaagtcag aagaagaaag ctttagcagc
1561 agcccttgcc acagctcaag agtattcaga aataagtatg gagcaaaaaa aattacagga
1621 agctttatca aaagcagctg gaaaaaagaa taaaacacct gtgcagctag atttagggga
1681 catgttagct gctctggaaa aacaacagca agcaatgaaa gcacggcaaa ttactaacac
1741 cagacctctg tcatatacag tggttactgc agcttctttt cacactaaag actctactaa
1801 tagaaaacct ttaaccaaaa gtcagccctg tttgacatcc tttaattctg tggacattgc
1861 ttcttctaaa gcaaaaaaag gaaaagagaa ggaaattgca aaactaaaac gacccacagc
1921 acttaaaaag gttattttaa aagaaagaga ggaaaagaag gggcgcttaa ctgtggacca
1981 caatcttttg ggatccgagg aaccaacaga aatgcactta gattttattg atgacttgcc
2041 acaggagatt gtttcccagg aagatactgg actaagcatg cccagtgata cttcactctc
2101 tccagcaagt cagaactctc catactgtat gacacctgtg tcacaaggct ctcctgctag
2161 ttctggaata ggcagtccaa tggcatcttc aacaataacc aaaatccaca gcaaaagatt
2221 tagagagtat tgtaatcagg ttctttgtaa agagattgat gaatgtgtga ctcttcttct
2281 ccaagagctt gtcagtttcc aggaacgcat ctaccaaaaa gatcctgtaa gagcaaaagc
2341 aaggagacga ctcgttatgg gtctaagaga agttaccaaa catatgaagt taaacaagat
2401 caagtgtgtt ataatttctc caaactgtga aaaaatccag tcaaaaggtg gtctggatga
2461 ggctttctat aatgttatag ccatggcacg ggaacaagaa attccttttg tgtttgccct
2521 tggaaggaaa gctctaggac gctgtgtgaa caagctggtt cctgttagcg tagtgggaat
2581 cttcaactac tttggtgctg agagcctgtt taataaatta gtagaactca ctgaggaggc
2641 caggaaagca tataaagata tggttgcagc aatggaacag gagcaggctg aggaagcctt
2701 aaagaatgtg aagaaggtac cacaccacat gggacattct cggaatccct ctgcagcaag
2761 tgccatttct ttctgcagtg ttatttctga accgatctct gaagtaaatg aaaaggaata
2821 tgaaacaaat tggagaaaca tggtggaaac ttcagatgga ctggaagcat cagaaaatga
2881 gaaagaggta tcctgtaagc acagcacttc tgaaaaaccc agtaaacttc catttgacac
2941 acccccaatt ggtaagcagc catcattagt ggctacaggc agtactacct cagctacaag
3001 tgctgggaaa tccacagcaa gtgataaaga ggaagtgaag ccagatgacc tggaatgggc
3061 ctcacagcag agtacagaga ctggctcttt ggatggcagt tgccgagatc ttttgaattc
3121 ctccatcacc agcaccacca gcactcttgt acctggcatg cttgaagaag aagaagacga
3181 agatgaggag gaggaggaag attatactca tgaacccata tctgtagaag tgcagctcaa
3241 tagtagaatt gagtcttggg tctcagagac ccagagaact atggaaaccc ttcagcttgg
3301 aaaaaccctt aatggttctg aggaagacaa tgtagagcaa agtggagaag aggaagcaga
3361 ggcgcctgag gtgctggagc cagggatgga cagtgaggca tggactgctg accagcaggc
3421 cagtcctggg cagcagaagt ccagcaactg cagctcgctc aacaaagagc actctgattc
3481 taattacaca acgcaaacta cgtaactcag gaaatgtcgg ctctctatct ccagctgtgg
3541 aagggttgca gccattacct tttatgcttc atctcaacat tttgcactgt ccagtattta
3601 atatacgtat ttaattccca acaaaaaaaa aaaaaaaa
//