LOCUS BC032957 907 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens chromosome 1 open reading frame 111, mRNA (cDNA clone MGC:33651 IMAGE:4827863), complete cds. ACCESSION BC032957 VERSION BC032957.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 907) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 907) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (14-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 47 Row: a Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 32698991. FEATURES Location/Qualifiers source 1..907 /db_xref="H-InvDB:HIT000041749" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:33651 IMAGE:4827863" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..907 /gene="C1orf111" /gene_synonym="HSD20" /gene_synonym="RP11-565P22.3" /db_xref="GeneID:284680" /db_xref="HGNC:HGNC:27648" CDS 72..857 /gene="C1orf111" /gene_synonym="HSD20" /gene_synonym="RP11-565P22.3" /codon_start=1 /product="chromosome 1 open reading frame 111" /protein_id="AAH32957.1" /db_xref="GeneID:284680" /db_xref="HGNC:HGNC:27648" /translation="MENFSLLSISGPPISSSALSAFPDIMFSRATSLPDIAKTAVPTE ASSPAQALPPQYQSIIVRQGIQNTVLSPDCSLGDTQHGEKLRRNCTIYRPWFSPYSYF VCADKESQLEAYDFPEVQQDEGKWDNCLSEDMAENICSSSSSPENTCPREATKKSRHG LDSITSQDILMASRWHPAQQNGYKCVACCRMYPTLDFLKSHIKRGFREGFSCKVYYHK LKALWSKEQKARLGDRLSSGSCQAFNSPAEHLRQIGGEAYLCL" BASE COUNT 234 a 280 c 223 g 170 t ORIGIN 1 agcgtcggga caaaccagcc agcctctcca gagcaggcgt gtgatctctg tacccccgca 61 gtggtcagaa tatggagaac ttctcactcc tcagcatctc tggacctcca atctcttcct 121 ccgccctgag tgcttttccc gacattatgt tctctcgtgc caccagcctg ccagacattg 181 caaagacagc agtacccact gaggcatcca gcccagctca ggccctgcca ccccagtacc 241 aaagcatcat tgtcaggcaa gggatacaga acacagtgct ctcaccagac tgcagcttgg 301 gggacaccca gcacggagag aagctgaggc ggaactgcac tatctaccgg ccctggttct 361 ccccctacag ctacttcgtg tgtgcagaca aagagagcca gctggaggcc tatgacttcc 421 cagaggtgca gcaggatgag ggcaagtggg acaactgcct ttctgaggac atggctgaga 481 acatctgttc gtcctcttcc tccccagaga acacttgccc tcgagaagcc accaagaaat 541 ccaggcatgg cctggactcc atcacatccc aggacatcct aatggcttcc agatggcacc 601 cagcacagca gaatggctac aagtgcgtgg cctgctgccg catgtacccc accctggact 661 tcctcaagag ccacatcaag aggggcttca gggagggctt cagctgcaag gtgtactacc 721 acaagctcaa agccctctgg agcaaggagc agaaggcccg gctgggagac aggctctcct 781 ccggcagctg ccaggccttc aatagtcctg ctgaacacct taggcaaatt ggcggtgaag 841 cctacttatg tctctagaga gatgccaata aagttagtca cagccttcaa gaaaaaaaaa 901 aaaaaaa //