LOCUS BC032950 2633 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens cation channel, sperm associated 1, mRNA (cDNA clone
MGC:33335 IMAGE:4822261), complete cds.
ACCESSION BC032950
VERSION BC032950.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2633)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2633)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC032950.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: j Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 26051219.
FEATURES Location/Qualifiers
source 1..2633
/db_xref="H-InvDB:HIT000041746"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33335 IMAGE:4822261"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2633
/gene="CATSPER1"
/gene_synonym="CATSPER"
/gene_synonym="MGC33335"
/gene_synonym="MGC33368"
/db_xref="GeneID:117144"
/db_xref="HGNC:HGNC:17116"
/db_xref="MIM:606389"
CDS 138..2480
/gene="CATSPER1"
/gene_synonym="CATSPER"
/gene_synonym="MGC33335"
/gene_synonym="MGC33368"
/codon_start=1
/product="cation channel, sperm associated 1"
/protein_id="AAH32950.1"
/db_xref="GeneID:117144"
/db_xref="HGNC:HGNC:17116"
/db_xref="MIM:606389"
/translation="MDQNSVPEKAQNEADTNNADRFFRSHSSPPHHRPGHSRALHHYE
LHHHGVPHQRGESHHPPEFQDFHDQALSSHVHQSHHHSEARNHVRAHGPTGFGLAPSQ
GAVPSHRSYGEDYHDELQRDGRRHHDGSQYSGFHQQSDSHYHRGSHHGRPQYLGENLS
HYSSGVPHHGEASHHGGSYLPHGPNPYSESFHHSEASHLSGLQHDESQHHQVPHRGWP
HHHQVHHHGRSRHHEAHQHGKSPHHGETISPHSSVGSYQRGISDYHSEYHQGDHHPSE
YHHGDHPHHTQHHYHQTHRHRDYHQHQDHHGAYHSSYLHGDYVQSTSQLSIPHTSRSL
IHDAPGPAASRTGVFPYHVAHPRGSAHSMTRSSSTIRSRVTQMSKKVHTQDISTKHSE
DWGKEEGQFQKRKTGRLQRTRKKGHSTNLFQWLWEKLTFLIQGFREMIRNLTQSLAFE
TFIFFVVCLNTVMLVAQTFAEVEIRGEWYFMALDSIFFCIYVVEALLKIIALGLSYFF
DFWNNLDFFIMAMAVLDFLLMQTHSFAIYHQSLFRILKVFKSLRALRAIRVLRRLSFL
TSVQEVTGTLGQSLPSIAAILILMFTCLFLFSAVLRALFRKSDPKRFQNIFTTIFTLF
TLLTLDDWSLIYMDSRAQGAWYIIPILIIYIIIQYFIFLNLVITVLVDSFQTALFKGL
EKAKQERAARIQEKLLEDSLTELRAAEPKEVASEGTMLKRLIEKKFGTMTEKQQELLF
HYLQLVASVEQEQQKFRSQAAVIDEIVDTTFEAGEEDFRN"
BASE COUNT 616 a 874 c 612 g 531 t
ORIGIN
1 acgtgaatag tcaggccttt ctggaagccc agtgccacag tctgcactga gcttggctca
61 ggaaagaagg gaaatccagg cggggcctgt tgggcccagg tcttgagctc tttggctcca
121 gagttcccag cacagtcatg gatcaaaact cagtgcctga aaaggctcag aatgaggcag
181 acacaaataa tgcagatagg ttctttcgct ctcactcatc acccccacac cacaggccag
241 gccacagcag agctctccac cattacgagt tgcaccatca cggcgtgccc caccaacgtg
301 gtgaatctca ccaccctccg gagttccaag acttccacga ccaagccttg tcctcccatg
361 tccaccaatc tcaccaccac agcgaggcac ggaatcacgt cagagcccat ggccccacag
421 gctttggtct ggctccctct caaggcgccg tcccctccca ccgttcctac ggtgaggact
481 accatgatga gctccaacgt gatggcagga ggcatcatga tgggtcccaa tacagtgggt
541 tccatcagca gagtgactcc cattaccata gggggtctca ccatggcaga ccccaatatc
601 tcggtgagaa tttatcccac tattcctctg gcgtgcccca ccacggtgag gcttcccacc
661 atggtgggtc ctacctcccc catggaccca atccctacag tgagtccttc caccacagcg
721 aggcttccca ccttagcggg ctccaacacg atgagtccca gcatcaccaa gtcccccacc
781 gtggctggcc ccaccatcac caagtccacc accatggcag gtcccgtcat catgaagccc
841 accagcatgg aaagtctcct catcacggag agaccatttc ccctcattcc tctgtggggt
901 cctaccagcg tgggatatct gactatcaca gcgagtacca ccaaggtgat caccacccca
961 gtgagtacca ccatggcgac catccccacc acacacagca ccactaccac cagacccacc
1021 ggcaccgaga ctaccatcag caccaagacc accacggcgc gtatcattcc agttacctcc
1081 atggcgacta cgtccagagc acttcccaac tctctatccc acacacatcc cggagcctga
1141 ttcacgatgc ccccggccct gctgcttctc gtacaggagt cttcccctat cacgtagcac
1201 acccacgggg ctcggctcac agcatgactc ggtcctccag cacaatccgc tcacgtgtca
1261 cccagatgtc caaaaaagtc catacccagg atatctccac caaacattca gaagactggg
1321 gcaaagaaga agggcaattt cagaaacgca aaaccggccg gctccagcgg acccgcaaga
1381 agggacactc taccaatctc ttccagtggc tgtgggaaaa gctaaccttc ctcattcagg
1441 gcttccggga aatgatccgg aacctgaccc aatccttggc ctttgaaact ttcatcttct
1501 tcgttgtctg cctcaacacc gtcatgctgg tggcccagac cttcgctgaa gtcgagatcc
1561 ggggcgagtg gtacttcatg gccttggact ccatattctt ctgcatctac gtggtggaag
1621 ccctgctcaa gatcatcgcc ctgggcctct cgtacttctt tgacttctgg aacaatttgg
1681 acttcttcat tatggccatg gccgtgctgg acttcttgct gatgcagacc cactccttcg
1741 ccatctacca ccaaagcctc ttccggatcc tcaaggtctt caagagcctg cgggccctga
1801 gggcaatccg ggtcctgcgg aggctcagct tcctgaccag cgtccaggaa gtgacaggga
1861 ccctgggcca gtccttgccg tccatcgcag ccatcctcat cctcatgttt acctgcctct
1921 tcctcttctc cgcggtcctc cgggcactgt tccgcaaatc tgaccccaag cgcttccaga
1981 acatcttcac caccatcttc accctcttca ccttgctcac gctggatgac tggtccctca
2041 tctacatgga cagccgtgcc cagggcgcct ggtacatcat tcccatcctc ataatttaca
2101 tcatcatcca gtacttcatc ttcctcaacc tggtgattac tgtcctggtg gatagcttcc
2161 agacggcgct gttcaaaggc cttgagaaag cgaagcagga gagggccgcc cggatccaag
2221 agaagctgct ggaagactca ctgacggagc tcagagctgc agagcccaaa gaggtggcga
2281 gtgaaggcac catgctgaag cggctcatcg agaaaaagtt tgggaccatg actgagaagc
2341 agcaggagct cctgttccat tacctgcagc tggtggcaag cgtggagcag gagcagcaga
2401 agttccgctc ccaggcagcc gtcatcgatg agattgtgga caccacattt gaggctggag
2461 aagaggactt caggaattga ccccaggagg acaccagata cagacttcag cccctggcag
2521 tctgcccacc tgggtgcact gggacgggtc cccagatctg ctggaatgat tgtccgggcc
2581 ctgcagagca ggggccccaa cagagttttt aaaccccaaa aaaaaaaaaa aaa
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