LOCUS BC032944 4403 bp mRNA linear HUM 19-MAR-2009
DEFINITION Homo sapiens KIAA0317, mRNA (cDNA clone MGC:33039 IMAGE:5267463),
complete cds.
ACCESSION BC032944
VERSION BC032944.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4403)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4403)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC032944.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: l Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42734314
The stop codon of the CDS annotated on this record is located > 55
bases upstream of a splice junction, and therefore the mRNA is
predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES Location/Qualifiers
source 1..4403
/db_xref="H-InvDB:HIT000051094"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33039 IMAGE:5267463"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4403
/gene="KIAA0317"
/db_xref="GeneID:9870"
/db_xref="HGNC:HGNC:20363"
CDS 510..2879
/gene="KIAA0317"
/codon_start=1
/product="KIAA0317 protein"
/protein_id="AAH32944.1"
/db_xref="GeneID:9870"
/db_xref="HGNC:HGNC:20363"
/translation="MFYVIGGITVSVVAFFFTIKFLFELAARVVSFLQNEDRERRGDR
TIYDYVRGNYLDPRSCKVSWDWKDPYEVGHSMAFRVHLFYKNGQPFPAHRPVGLRVHI
SHVELAVEIPVNQEVLQEPNSNVVKVAFTVRKAGRYEITVKLGGLNVAYSPYYKIFQP
GMVVPSKTKIVCHFSTLVLTCGQPHTLQIVPRDEYDNPTNNSMSLRDEHNYTLSIHEL
GPQEEESTGVSFEKSVTSNRQTFQVFLRLTLHSRGCFHACISYQNQPINNGEFDIIVL
SEDEKNIVERNVSTSGVSIYFEAYLYNATNCSSTPWHLPPMHMTSSQRRPSTAVDEED
EDSPSECHTPEKVKKPKKVYCYVSPKQFSVKEFYLKIIHWRLYTFRVCPGTKFSYLGP
DPVHKLLTLVVDDGIQPPVELSCKERNILAATFIRSLHKNIGGSETFQDKVNFFQREL
RQVHMKRPHSKVTLKVSRHALLESSLKATRNFSISDWSKNFEVVFQDEEALDWGGPRR
EWFELICKALFDTTNQLFTRFSDNNQALVHPNPNRPAHLRLKMYEFAGRLVGKCLYES
SLGGAYKQLVRARFTRSFLAQIIGLRMHYKYFETDDPEFYKSKVCFILNNDMSEMELV
FAEEKYNKSGQLDKVVELMTGGAQTPVTNANKIFYLNLLAQYRLASQVKEEVEHFLKG
LNELVPENLLAIFDENELELLMCGTGDISVSDFKAHAVVVGGSWHFREKVMRWFWTVV
SSLTQEELARLLQFTTGSSQLPPGGFAALCPSFQIIAAPTHSTLPTAHT"
BASE COUNT 1171 a 1034 c 1062 g 1136 t
ORIGIN
1 gggggcggaa actccttggg gaaagggcaa tcccccgagc cggttcccag gccgggtgga
61 gaccaactct ggggtctgtt ggtgggagag tggggagccc gtcttctgct gagtgctgcc
121 gccccttccc aggacagcgg aggtggaact tcgtcgcgct gcaacccccg gctcgggatc
181 ctggggcgtc ctttggcagt cgattgcacc ctgcactaga gagaagtcca ggaatgatat
241 attcttgggc tgtatttctc taccctggag ttcatccagt tcatcccaga aacactgacc
301 tgattactgt gacaaagtct gatggataga ccctttctgt tgaccttgtg gcgtttttct
361 ttcatgtgga agttggaaga caaggtgaaa ggggccaaaa gttacctgct ttggtgaata
421 ggagtgctct acttggttct cagaacatgg gccctcgttt aaagctgcag ctgtgatcct
481 cggctgtctg ttggcattga cgggacctga tgttttacgt tattggtggg atcacagtgt
541 ctgtggttgc attcttcttc acaattaagt tcctctttga gcttgccgca cgtgtagtca
601 gcttcctcca gaatgaggac cgcgagcgcc gaggggaccg gactatttat gactacgtgc
661 ggggaaatta cctggatccc cggtcttgca aagtctcctg ggattggaag gacccctatg
721 aggtgggcca cagcatggcc ttccgagtgc atttattcta taagaacggg cagcctttcc
781 ctgcacatcg gcctgtggga ctaagagttc acatctctca tgtcgagcta gcagtggaaa
841 ttccagtgaa ccaggaagtc cttcaggagc ccaattccaa cgtagtaaaa gtggccttca
901 ctgtgcgcaa ggctgggcgt tatgaaatca cagtgaagct tggtggatta aatgtggcat
961 atagtcccta ctacaaaatt tttcaacctg gaatggtggt tccttctaag accaaaattg
1021 tgtgccactt ttctactctt gtattgacct gtgggcagcc gcacaccctt caaatagtac
1081 cccgagatga gtatgataat cccaccaaca attccatgtc cttgagagat gagcacaatt
1141 acaccttgtc cattcatgag ctcggccctc aagaagaaga gagtactggt gtctcatttg
1201 agaaatcagt aacatccaac aggcagactt tccaggtgtt cttgcgactc accctgcatt
1261 ctcgaggctg cttccatgct tgcatttcat accaaaatca gccaatcaat aatggtgaat
1321 ttgacattat tgtcctaagt gaggatgaga agaatatcgt cgaacgcaat gtgtccactt
1381 caggcgtgag catttacttt gaggcttatc tttataatgc taccaactgt agcagcactc
1441 catggcacct gccacccatg cacatgacct cttcccagcg ccggccatcc actgctgttg
1501 acgaggaaga tgaagactcg ccctctgagt gccacacccc tgagaaggtg aagaaaccga
1561 agaaggtgta ctgctatgtg tcaccaaagc aattctcagt gaaggagttc tacctgaaga
1621 tcatccactg gcgcctttac accttccgag tgtgtccagg aacaaaattt tcataccttg
1681 gtcctgaccc tgtccataag ctgctcacac tggtggtgga tgatggcatt caacctcctg
1741 tggagctcag ctgtaaggag aggaacattc tagcagccac ttttatccgc tccctgcata
1801 agaacatagg aggctctgag acctttcagg acaaggtgaa ctttttccag cgagagcttc
1861 ggcaggtaca tatgaaaaga ccacattcca aagtcaccct gaaggtcagc agacatgcct
1921 tgttggaatc gtctctgaaa gccactcgga atttctccat ctcagattgg agcaagaact
1981 ttgaggttgt tttccaggat gaagaagctc tggactgggg agggcctcgc cgggaatggt
2041 ttgagctaat ctgcaaagca ctatttgata caaccaatca gctcttcacc cggttcagtg
2101 acaacaacca agcattagtg catcccaacc ctaatcgccc cgctcatctg cgcctgaaaa
2161 tgtatgagtt tgcgggacgg ctcgtgggca agtgtctcta tgagtcctct ctaggaggag
2221 cctacaagca gttggtccga gctcgcttca cccgctcttt cctggcccaa atcataggac
2281 tgcgtatgca ttacaagtac tttgaaacag atgacccaga attctacaaa tctaaagttt
2341 gttttatcct caacaatgac atgagtgaga tggagctggt ctttgcagaa gagaaatata
2401 ataaatcagg tcaattggat aaggttgtag aactcatgac aggtggagct caaactccag
2461 tcaccaatgc gaataaaatc ttctatttaa atttgctggc ccaatatcgg ctggccagtc
2521 aagtgaaaga ggaggtggaa catttcctaa aaggcctgaa tgaattggtc cctgagaacc
2581 ttttggctat ttttgatgag aatgagcttg agctgctgat gtgtgggact ggagacatca
2641 gtgtgtctga cttcaaagcc catgcagtag ttgttggtgg ctcatggcat ttcagagaaa
2701 aggtcatgag gtggttttgg actgtggttt ccagtctgac ccaggaggag ttggctcggc
2761 tacttcagtt cacaacaggc tcctctcagc taccacctgg aggctttgcc gccctctgtc
2821 cctcatttca gattattgcc gctccgaccc atagcacgct gcctactgca cacacatgaa
2881 attcaatata gaaaatttgg aaataagaaa aagaacaagg gaaataggta agttgctatc
2941 cagaggtaat caccgttaac actttgataa atagcctttt gattttcata tttaagcaca
3001 catttgtctc ccaacatctc cctcacccac aaggggtttg ggagtggcaa acaaaaatac
3061 tgctcctaag aagtttgttg gcggcaagtc ttaccgattc ttttcagctt acaaaggtaa
3121 gcttggaaga gaagaaaaaa aacagacctc tgatttgggc ctagaaggag tagtattaag
3181 gaccctgact ttcttgggaa agtaattatg atgtcttgta tattggttcc caatctggaa
3241 aatgttaaaa aaattccctt ttgaatttaa aaacaaaaca aaacagatcc ttgcccccac
3301 cccagacagt gcattctcct cttacctcat caagctcctg agtgatatga gatatcttaa
3361 agggccaggc acagtgactc atatgtataa tcccagtact ttggaacact gcaaggcagg
3421 agggtcactt gaacccagga gttcgaggct gcagtgagct atgcctgtgt cactgtgctc
3481 tagcctgggt gacagagcga gacactgtct ctctttctct ttttttttga aaaggtgggg
3541 ttttggcatg tttcccaggc tgatcttgaa ctcctgggct caagtgatcc acccacctcc
3601 caaagtgctg ggatcacaag catgagccat ggggcccagc caaatgttca tatttttatt
3661 tttaactccc gtggttcaac tttgggcaag acaaccttct ttcagtatca gtttcctgac
3721 ctgcaaaatg atgctattaa ccaattaaga aaatcgacta ataacttaag agttcttggg
3781 aaaaaagttt tcctatatat agtatgtgtg ttaccatgct gactgtgact tagggccctg
3841 gtagtttctg tagcaggagg ctgtatgggt ctgggggcag ttgagaatgc tagagtcgat
3901 gactggtgtg gaaattccca gggggtggtg actctgtttt tcaccttgcc gtgtccaggc
3961 aggccagaga gaatgagtac tcaagacacc tggcccaaac attcatgaag aagacaccaa
4021 gtcagaagag acttcctcct ttgcatgatc ctgtaaggac ggaagagcta gcagctgtgg
4081 atactccgaa cagaccagtg aggcagagca gcaaaagcag cctggaactg gaggcggcca
4141 ggagaggagc agcaagccgg tgcccacagt cagccacggc accctcagca ggcccattag
4201 gaggaattga gaagcttctc cagtgtttgc cctaaaatct caatccattt taagtgacag
4261 aaagtgacaa aaaacacccc agaggaaaat actggggcct aagggagtaa tctcagaact
4321 cttgtaataa taataataat agcagccaac atctaataca tgcttactct gtgccaggcc
4381 ctattctaaa aaaaaaaaaa aaa
//