LOCUS BC032862 3364 bp mRNA linear HUM 21-JUL-2005 DEFINITION Homo sapiens suppressor of cytokine signaling 5, mRNA (cDNA clone MGC:33746 IMAGE:5264754), complete cds. ACCESSION BC032862 VERSION BC032862.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3364) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3364) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (07-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 47 Row: i Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 41349445. FEATURES Location/Qualifiers source 1..3364 /db_xref="H-InvDB:HIT000051086" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:33746 IMAGE:5264754" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3364 /gene="SOCS5" /gene_synonym="CIS6" /gene_synonym="Cish5" /gene_synonym="CISH6" /gene_synonym="KIAA0671" /gene_synonym="SOCS-5" /db_xref="GeneID:9655" /db_xref="MIM:607094" CDS 266..1876 /gene="SOCS5" /gene_synonym="CIS6" /gene_synonym="Cish5" /gene_synonym="CISH6" /gene_synonym="KIAA0671" /gene_synonym="SOCS-5" /codon_start=1 /product="SOCS5 protein" /protein_id="AAH32862.1" /db_xref="GeneID:9655" /db_xref="MIM:607094" /translation="MDKVGKMWNNFKYRCQNLFGHEGGSRSENVDMNSNRCLSVKEKN ISIGDSTPQQQSSPLRENIALQLGLSPSKNSSRRNQNCATEIPQIVEISIEKDNDSCV TPGTRLARRDSYSRHAPWGGKKKHSCSTKTQSSLDADKKFGRTRSGLQRRERRYGVSS VHDMDSVSSRTVGSRSLRQRLQDTVGLCFPMRTYSKQSKPLFSNKRKIHLSELMLEKC PFPAGSDLAQKWHLIKQHTAPVSPHSTFFDTFDPSLVSTEDEEDRLRERRRLSIEEGV DPPPNAQIHTFEATAQVNPLYKLGPKLAPGMTEISGDSSAIPQANCDSEEDTTTLCLQ SRRQKQRQISGDSHTHVSRQGAWKVHTQIDYIHCLVPDLLQITGNPCYWGVMDRYEAE ALLEGKPEGTFLLRDSAQEDYLFSVSFRRYNRSLHARIEQWNHNFSFDAHDPCVFHSS TVTGLLEHYKDPSSCMFFEPLLTISLNMTFPFSLQYICRAVICRCTTYDGIDGLPLPS MLQDFLKEYHYKQKVRVRWLEREPVKAK" BASE COUNT 974 a 657 c 755 g 978 t ORIGIN 1 agcggggggt ttggggggag gggggagggg aaacgggtga agaaggggag gcggcggcct 61 ggcgggggca tccggcggag ctggggtccc cgggctccgt ccggaggaag cgacgctgcg 121 ctcgctgggc agtcggaggg gacgggacgc accagagggc aggcggactc gccctgtcgg 181 tgactgcgcc gtccgggccc gtcctgcctg gccgcaggtg ccctggatga ggccgccccg 241 cgcgccccaa acgattttat aatcaatgga taaagtggga aaaatgtgga ataacttcaa 301 atacaggtgt cagaatctct tcggtcatga gggaggaagc cgtagtgaaa atgtggacat 361 gaactccaac agatgtttgt ctgtcaaaga gaaaaacatc agcataggag actcaactcc 421 tcagcaacaa agcagtccct taagagaaaa tattgcctta caactgggat taagcccttc 481 gaagaattct tcaaggagaa atcaaaattg tgccacagaa atccctcaaa ttgttgaaat 541 aagcatcgaa aaggataatg attcttgtgt tacgccagga acaagacttg cacgaagaga 601 ttcctactct cgacatgctc catggggtgg gaagaaaaaa cattcctgtt ctacaaagac 661 ccagagttca ttggatgctg ataaaaagtt tggtagaact cgaagtggac ttcaaaggag 721 agagaggcgc tacggcgtaa gttctgtaca cgacatggac agtgtttcca gcagaactgt 781 aggaagtcgc tctctaagac agaggttgca ggatactgtg ggcttgtgtt ttcccatgag 841 aacttacagc aagcagtcaa agcctctctt ttccaataaa agaaaaatcc atctctctga 901 attaatgctt gagaaatgcc cttttcctgc tggctcagat ttagcccaaa aatggcattt 961 gattaaacag catacagctc ctgtgagccc acattcaaca ttttttgata catttgatcc 1021 atctttggtt tctacagaag atgaagaaga taggcttaga gagagaaggc ggcttagtat 1081 tgaagaaggg gttgatcccc ctcccaatgc acaaatacat acatttgaag ctactgcaca 1141 ggttaatcca ttatataaac tgggaccaaa attagctcct ggaatgactg aaataagtgg 1201 ggacagttct gcaattccac aagctaattg tgactcggaa gaggatacaa ccaccctgtg 1261 tttgcagtca cggaggcaga agcagcgtca gatatctgga gacagccata cccatgttag 1321 cagacaggga gcttggaaag tccacacaca gattgattac atacactgcc tcgtgcctga 1381 tttgcttcaa attacaggga atccctgtta ctggggagtg atggaccgtt atgaagcaga 1441 agcccttctc gaagggaaac ctgaaggcac gtttttgctc agggactctg cgcaagagga 1501 ctacctcttc tctgtgagct tccgccgcta caacagatcc ctgcatgccc gaattgagca 1561 gtggaatcac aactttagtt tcgacgccca tgacccgtgt gtatttcact cctccactgt 1621 aacgggactt ttagaacatt ataaagatcc cagttcgtgc atgttttttg aaccattgct 1681 tactatatca ctaaatatga ctttcccttt tagcctgcag tatatctgtc gcgcggtaat 1741 ctgcaggtgc actacgtatg atggaattga tgggctccct ctaccctcaa tgttacagga 1801 ttttttaaaa gagtatcatt ataaacaaaa agttagagtt cgctggttgg aacgagaacc 1861 agtcaaggca aagtaaactc tccggtcccc aaaggttgtt aactaggtcc gctttcatgt 1921 gcatcagaca gtacacctat agcaagcaca cgtagcagtg ttaggctttt tcatacagta 1981 tgtaagctta gtgttagtat ctgtcagatg ctacctgctg ttacttattc agataaacat 2041 ggtgcctatt ggaacaatag cggatagagc tacaggtgtt cagtaagact acaaaaacat 2101 tttgcctatt tcgctaacag tttggttttt aatggctgtg gtatttgagt gaggcaactc 2161 tgggtcattt gttatgaaga attctatttc ttactgaaga acaaattatt aatattggat 2221 gagtatttca acagtgtgac taatgtttga aattattttt tctaagagtt tttctataac 2281 cttccaaaag tcgtgatgtt tgtagttact ataaatcaag ctttggaagt ccaaaaagaa 2341 taaaagactg ccttcctttt agaaaaaaat gcaattttct ggccacaagg gcatagtgca 2401 gttcacttac gtgttgatgt agtttataat cagacgcctt ttctcttctg caaaaggtac 2461 tgttaagtaa accagatttt ctaaataggc attcttaaaa tttcagactt acaaatctag 2521 tagtagaatt ttattgaaag gcctaggtat taatttttta aatgagtgct ttaacttaaa 2581 acaggcgttt ggaatagctg ctgcaatgta gtcttgtgtg tgattttttt ttaagttgat 2641 gtgcagtcta attgttgttt cataaaagtt ggatctgttc ctatgcccag gatgattttg 2701 tgaaccgtga agtacgtgag actagaagac gcccaaacaa gtcagataat agtaactaca 2761 atggttgctg atgttgagat tattgttgaa ctataattaa taatttggat ggcagaattt 2821 atctcttttt tgtaaactct cataactgaa ttgcttaagt ataatttata gaatttcagt 2881 gcagttcatt cttaatggaa aatctgaaac ctaaattgca gatttaaaag gtactgtaca 2941 accattatat ctgtaaataa cttagcacct ttttgtcact ttgaataata tgtactacta 3001 cttgagtgag cgcttttgga agttatatca agttctagtg tttgcttctt agtaactgaa 3061 ctgaatttac agttctgtcc tagacatttt gcactaaagt agccgaatcc actctcatgt 3121 cttttcgtta atgtgctctg taccactggt gagtgctcca tagtttcctt acctgctgct 3181 acagaatgtt attttacatc cctatggcta ttgccaaggc tacaaaaaag gaaagctata 3241 tttgtatgca acactaacct tttgactgct aatgtatgtt tctgcttgct gtgccttgtt 3301 atggctgctt tttttgtgct aataaagtat gtttggtgtt ctccttgcaa aaaaaaaaaa 3361 aaaa //