LOCUS BC032855 3741 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens cytokine-like nuclear factor n-pac, mRNA (cDNA clone MGC:33217 IMAGE:5265561), complete cds. ACCESSION BC032855 VERSION BC032855.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3741) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3741) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (07-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 47 Row: j Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 40556375. FEATURES Location/Qualifiers source 1..3741 /db_xref="H-InvDB:HIT000092838" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:33217 IMAGE:5265561" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3741 /gene="N-PAC" /gene_synonym="BM045" /gene_synonym="HIBDL" /db_xref="GeneID:84656" CDS 29..1690 /gene="N-PAC" /gene_synonym="BM045" /gene_synonym="HIBDL" /codon_start=1 /product="cytokine-like nuclear factor n-pac" /protein_id="AAH32855.1" /db_xref="GeneID:84656" /translation="MAAVSLRLGDLVWGKLGRYPPWPGKIVNPPKDLKKPRGKECFFV KFFGTEDHAWIKVEQLKPYHAHKEEMIKINKGKRFQQAVDAVEEFLRRAKGKDQTSSH NSSDDKNRRNSSEERSRPNSGDEKRKLSLSEGKVKKNMGEGKKRVSSGSSERGSKSPL KRAQEQSPRKRGRPPKDEKDLTIPESSTVKGMMAGPMAAFKWQPTASEPVKDADPHFH HFLLSQTEKPAVCYQAITKKLKICEEETGSTSIQAADSTAVNGSITPTDKKIGFLGLG LMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDP KAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQ LSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMAT IAEGLTLAQVTGQSQQTLLDILNQGQLASIFLDQKCQNILQGNFKPDFYLKYIQKDLR LAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYRAYIH" BASE COUNT 940 a 959 c 993 g 849 t ORIGIN 1 agcgggtcgg cggtggttgg gtggtaagat ggcggctgtg agtctgcggc tcggcgactt 61 ggtgtggggg aaactcggcc gatatcctcc ttggccagga aagattgtta atccaccaaa 121 ggacttgaag aaacctcgcg gaaaggaatg cttctttgtg aaattttttg gaacagaaga 181 tcatgcctgg atcaaagtgg aacagctgaa gccatatcat gctcataaag aggaaatgat 241 aaaaattaac aagggtaaac gattccagca agcggtagat gctgtcgaag agttcctcag 301 gagagccaaa gggaaagacc agacgtcatc ccacaattct tctgatgaca agaatcgacg 361 taattccagt gaggagagaa gtaggccaaa ctcaggtgat gagaagcgca aacttagcct 421 gtctgaaggg aaggtgaaga agaacatggg agaaggaaag aagagggtgt cttcaggctc 481 ttcagagaga ggctccaaat cccctctgaa aagagcccaa gagcaaagtc cccggaagcg 541 gggtcggccc ccaaaggatg agaaggatct caccatcccg gagtctagta ccgtgaaggg 601 gatgatggcc ggaccgatgg ccgcgtttaa atggcagcca accgcaagcg agcctgttaa 661 agatgcagat cctcatttcc atcatttcct gctaagccaa acagagaagc cagctgtctg 721 ttaccaggca atcacgaaga agttgaaaat atgtgaagag gaaactggct ccacctccat 781 ccaggcagct gacagcacag ccgtgaatgg cagcatcaca cccacagaca aaaagatagg 841 atttttgggc cttggtctca tgggaagtgg aatcgtctcc aacttgctaa aaatgggtca 901 cacagtgact gtctggaacc gcactgcaga gaaatgtgat ttgttcatcc aggagggggc 961 ccgtctggga agaacccccg ctgaagtcgt ctcaacctgc gacatcactt tcgcctgcgt 1021 gtcggatccc aaggcggcca aggacctggt gctgggcccc agtggtgtgc tgcaagggat 1081 ccgccctggg aagtgctacg tggacatgtc aacagtggac gctgacaccg tcactgagct 1141 ggcccaggtg attgtgtcca ggggggggcg ctttctggaa gcccccgtct cagggaatca 1201 gcagctgtct aatgacggga tgttggtgat cttagcggct ggagacaggg gcttatatga 1261 ggactgcagc agctgcttcc aggcgatggg gaagacctcc ttcttcctag gtgaagtggg 1321 caatgcagcc aagatgatgc tgatcgtgaa catggtccaa gggagcttca tggccactat 1381 tgccgagggg ctgaccctgg cccaggtgac aggccagtcc cagcagacac tcttggacat 1441 cctcaatcag ggacagttgg ccagcatctt cctggaccag aagtgccaaa atatcctgca 1501 aggaaacttt aagcctgatt tctacctgaa atacattcag aaggatctcc gcttagccat 1561 tgcgctgggt gatgcggtca accatccgac tcccatggca gctgcagcaa atgaggtgta 1621 caaaagagcc aaggcgctgg accagtctga caacgatatg tccgccgtgt accgagccta 1681 catacactaa gctgtcgaca ccccgccctc acccctccaa tcccccctct gaccccctct 1741 tcctcacatg gggtcggggg cctgggagtt cattctggac cagcccacct atctccattt 1801 ccttttatac agactttgag acttgccatc agcacagcac acagcagcac ccttcccctg 1861 aggccggtgg ggaggggaca agtgtcagca ggattggcgt gtgggaaagc tcttgagctg 1921 ggcactggcc ccccggacga ggtggctgtg tgttcacaca cacacacaca cacacacaca 1981 cacacacaca cacaggctct cgccccagga tagaagctgc ccagaaactg ctgcctggct 2041 ttttttcttc cgagcttgtc ttatctcaaa ccccttccag tcaaggaact agaatcagca 2101 acgagagttg gaagccttcc cacagcttcc cccagagcga agaggctgta gtcatgtccc 2161 catcccccac tggattccct acaaggagag gccttgggcc cagatgagcc agtacagact 2221 ccagacagag gggcccttgg ggccctccaa cctcaggtga tgagctgaga aagatgttca 2281 cgtctaagcg tccagtgtgc accaagcgct ccatagacgc ctttgtgaac tgaaaagaga 2341 ctggcagagt cccgagaaga tggggccctg gctttccagg gagtgcagca agcagccggc 2401 ctgcaggtga gcatggaggc caggccctca ccgcctcgaa gccatgcccc agatgccact 2461 gccacagcgg gcgctcgctc ctccctaggc tgttttagta tttggatttg cattccatcc 2521 cttgggaggg agtcctcagg gccactagtg atgagccaag aggagtgggg gttgggggcg 2581 ctcctttctg tttccgttag gccacagact cttcacctgg ctctgaagag ccactcttac 2641 ctcggtcccc tcccagtggt cccaccttct ccaccctgcc ctgccaagtc ccctgcatgc 2701 ccaccgctct ccatcctccc tcctctccct cttcctcccg tggagacagt atttctttct 2761 gtctgtccct ttggcccaga cccagcctga ccaacgatga gcatttctta ggctcagctc 2821 ttgatacgga aacgagtgtc ttcactccag ccagcatcat ggtcttcggt gcttcccggg 2881 cccggggtct gtcgggaggg aagagaactg ggcctgacct acctgaactg actggccctc 2941 cgaggtgggt ctgggacatc ctagaggccc tacatttgtc cttggatagg ggaccggggg 3001 gggcttggaa tgttgcaaaa aaaaaagtta cccaagggat gtcagttttt tatccctctg 3061 catgggttgg attttccaaa atcataattt gcagaaggaa ggccagcatt tacgatgcaa 3121 tatgtaatta tatatagggt ggccacacta gggcggggtc cttcccacct cacagctttg 3181 gcccctttca gagattagaa actgggttag aggattgcag aagacgagtg gggggagggc 3241 agggaagatg cctgtcgggt ttttagcaca gttcatttca ctgggatttt gaagcatttc 3301 tgtctgaaca caaagcctgt tctagtcctg gcggaacaca ctgggggtgg gggcggggga 3361 agatgcggta atgaaaccgg ttagtcaatt ttgtcttaat attgttgaca attctgtaaa 3421 gttccttttt atgaatattt ctgtttaagc tatttcacct ttcttttgaa atccttccct 3481 tttaaggaga aaatgtgaca cttgtgaaaa agcttgtaag aaagcccctc cctttttttc 3541 tttaaacctt taaatgacaa atctaggtaa ttaaggttgt gaatttttat ttttgctttg 3601 tttttaatga acatttgtct ttcagaatag gattgtgtga taatgtttaa atggcaaaaa 3661 caaaacatga ttttgtgcaa ttaacaaagc tactgcaaga aaaataaaac acttcttggt 3721 aacacaaaaa aaaaaaaaaa a //