LOCUS BC032786 1730 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens D-aspartate oxidase, mRNA (cDNA clone MGC:45354
IMAGE:5179648), complete cds.
ACCESSION BC032786
VERSION BC032786.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1730)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1730)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 68 Row: k Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40217814.
FEATURES Location/Qualifiers
source 1..1730
/db_xref="H-InvDB:HIT000041721"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45354 IMAGE:5179648"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1730
/gene="DDO"
/gene_synonym="DASOX"
/gene_synonym="DDO-1"
/gene_synonym="DDO-2"
/db_xref="GeneID:8528"
/db_xref="HGNC:HGNC:2727"
/db_xref="MIM:124450"
CDS 5..1114
/gene="DDO"
/gene_synonym="DASOX"
/gene_synonym="DDO-1"
/gene_synonym="DDO-2"
/codon_start=1
/product="D-aspartate oxidase"
/protein_id="AAH32786.3"
/db_xref="GeneID:8528"
/db_xref="HGNC:HGNC:2727"
/db_xref="MIM:124450"
/translation="MRPARHWETRFGARDFGGFQDCFFRDRLMDTARIAVVGAGVVGL
STAVCISKLVPRCSVTIISDKFTPDTTSDVAAGMLIPHTYPDTPIHTQKQWFRETFNH
LFAIANSAEAGDAGVHLVSGWQIFQSTPTEEVPFWADVVLGFRKMTEAELKKFPQYVF
GQAFTTLKCECPAYLPWLEKRIKGSGGWTLTRRIEDLWELHPSFDIVVNCSGLGSRQL
AGDSKIFPVRGQVLQVQAPWVEHFIRDGSGLTYIYPGTSHVTLGGTRQKGDWNLSPDA
ENSREILSRCCALEPSLHGACNIREKVGLRPYRPGVRLQTELLARDGQRLPVVHHYGH
GSGGISVHWGTALEAARLVSECVHALRTPIPKSNL"
BASE COUNT 487 a 376 c 438 g 429 t
ORIGIN
1 gggcatgaga ccagccaggc actgggaaac aaggtttggt gccagagatt ttggtggctt
61 ccaagactgc tttttcagag acaggctcat ggacacagca cggattgcag ttgtcggggc
121 aggtgtggtg gggctctcca cggctgtgtg catctccaaa ctggtgcccc gatgctccgt
181 taccatcatt tcagacaagt ttactccaga taccaccagt gatgtggcag ccggaatgct
241 tattcctcac acttatccag atacacccat tcacacgcag aagcagtggt tcagagaaac
301 ctttaatcac ctctttgcaa ttgccaattc tgcagaagct ggagatgctg gtgttcattt
361 ggtatcaggt tggcagatat ttcagagcac tccgactgaa gaagtgccat tctgggctga
421 cgtggttctg ggatttcgaa agatgactga ggctgagctg aagaaattcc cccagtatgt
481 gtttggtcag gcttttacaa ccctgaaatg tgaatgccct gcctacctcc cgtggttgga
541 gaaaaggata aagggaagtg gaggctggac actcactcgg cgaatagaag acctgtggga
601 acttcatccg tcctttgaca tcgtggtcaa ctgttcaggc cttggaagca gacagcttgc
661 aggagactca aagattttcc ctgtaagggg ccaagtcctc caagttcagg ctccctgggt
721 ggagcatttt atccgagatg gcagtgggct gacatatatt tatcctggta catcccatgt
781 aaccctaggt ggaactaggc aaaaagggga ctggaatctg tccccggatg cagaaaatag
841 cagagagatt ctttcccgat gctgtgctct ggagccctcc ctccacggag cctgcaacat
901 cagggagaag gtgggcttga ggccctacag gccaggcgtg cgactgcaga cagagctcct
961 tgcgcgagat ggacagaggc tgcctgtagt ccaccactat ggccatggga gtgggggcat
1021 ctcagtgcac tggggcactg ctctggaggc cgccaggctg gtgagcgagt gtgtccatgc
1081 cctcaggacc cccattccca agtcaaacct gtagatgaca taaaatgaca gcaaagagac
1141 tgagagactg ttgatcaaag cacagaacag gttcaaataa cttttccact gcatgaaagt
1201 ttaattagac atttctttgt tttcaacatt agaagtggtg taacatgtaa gctgagcacg
1261 gtgggcctat agtcccagct acttgagagg ctgaggcagg aggattgttg agcccaggag
1321 tttgagtgca atctgggtaa cattttttag aggtgccagt tcccacctct aaaaaaaaca
1381 ccaacaacaa aagaaatgat gcaacatgta ggcttactta ggaagtccag cattaatggc
1441 atagggcata aagctctatt ttttgttaaa aatacttctt atagagtaaa atttatttag
1501 aactgatgtc caaggaccta tgcagattta tatgaatgtt ggaagctata gagattttga
1561 tatcatttgg cttataaatc cacaggagga gataatgtat ggaaaacatt taaatcactg
1621 tcaattgcag agctgcctgt gatcttctta ggttatagcc aagtcagcaa cataattcct
1681 ctaaataaaa ttacattgtg ctcacaaaaa aaaaaaaaaa aaaaaaaaaa
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