LOCUS BC032785 2026 bp mRNA linear HUM 29-AUG-2008
DEFINITION Homo sapiens surfactant protein B, mRNA (cDNA clone MGC:45314
IMAGE:5179408), complete cds.
ACCESSION BC032785
VERSION BC032785.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2026)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2026)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 68 Row: k Column: 13.
FEATURES Location/Qualifiers
source 1..2026
/db_xref="H-InvDB:HIT000041720"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45314 IMAGE:5179408"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2026
/gene="SFTPB"
/gene_synonym="PSP-B"
/gene_synonym="SFTB3"
/gene_synonym="SMDP1"
/gene_synonym="SP-B"
/db_xref="GeneID:6439"
/db_xref="HGNC:HGNC:10801"
/db_xref="MIM:178640"
CDS 4..1149
/gene="SFTPB"
/gene_synonym="PSP-B"
/gene_synonym="SFTB3"
/gene_synonym="SMDP1"
/gene_synonym="SP-B"
/codon_start=1
/product="surfactant protein B"
/protein_id="AAH32785.1"
/db_xref="GeneID:6439"
/db_xref="HGNC:HGNC:10801"
/db_xref="MIM:178640"
/translation="MAESHLLQWLLLLLPTLCGPGTAAWTTSSLACAQGPEFWCQSLE
QALQCRALGHCLQEVWGHVGADDLCQECEDIVHILNKMAKEAIFQDTMRKFLEQECNV
LPLKLLMPQCNQVLDDYFPLVIDYFQNQTDSNGICMHLGLCKSRQPEPEQEPGMSDPL
PKPLRDPLPDPLLDKLVLPVLPGALQARPGPHTQDLSEQQFPIPLPYCWLCRALIKRI
QAMIPKGALAVAVAQVCRVVPLVAGGICQCLAERYSVILLDTLLGRMLPQLVCRLVLR
CSMDDSAGPRSPTGEWLPRDSECHLCMSVTTQAGNSSEQAIPQAMLQACVGSWLDREK
CKQFVEQHTPQLLTLVPRGWDAHTTCQALGVCGTMSSPLQCIHSPDL"
BASE COUNT 455 a 622 c 529 g 420 t
ORIGIN
1 gccatggctg agtcacacct gctgcagtgg ctgctgctgc tgctgcccac gctctgtggc
61 ccaggcactg ctgcctggac cacctcatcc ttggcctgtg cccagggccc tgagttctgg
121 tgccaaagcc tggagcaagc attgcagtgc agagccctag ggcattgcct acaggaagtc
181 tggggacatg tgggagccga tgacctatgc caagagtgtg aggacatcgt ccacatcctt
241 aacaagatgg ccaaggaggc cattttccag gacacgatga ggaagttcct ggagcaggag
301 tgcaacgtcc tccccttgaa gctgctcatg ccccagtgca accaagtgct tgacgactac
361 ttccccctgg tcatcgacta cttccagaac cagactgact caaacggcat ctgtatgcac
421 ctgggcctgt gcaaatcccg gcagccagag ccagagcagg agccagggat gtcagacccc
481 ctgcccaaac ctctgcggga ccctctgcca gaccctctgc tggacaagct cgtcctccct
541 gtgctgcccg gggccctcca ggcgaggcct gggcctcaca cacaggatct ctccgagcag
601 caattcccca ttcctctccc ctattgctgg ctctgcaggg ctctgatcaa gcggatccaa
661 gccatgattc ccaagggtgc gctagctgtg gcagtggccc aggtgtgccg cgtggtacct
721 ctggtggcgg gcggcatctg ccagtgcctg gctgagcgct actccgtcat cctgctcgac
781 acgctgctgg gccgcatgct gccccagctg gtctgccgcc tcgtcctccg gtgctccatg
841 gatgacagcg ctggcccaag gtcgccgaca ggagaatggc tgccgcgaga ctctgagtgc
901 cacctctgca tgtccgtgac cacccaggcc gggaacagca gcgagcaggc cataccacag
961 gcaatgctcc aggcctgtgt tggctcctgg ctggacaggg aaaagtgcaa gcaatttgtg
1021 gagcagcaca cgccccagct gctgaccctg gtgcccaggg gctgggatgc ccacaccacc
1081 tgccaggccc tcggggtgtg tgggaccatg tccagccctc tccagtgtat ccacagcccc
1141 gacctttgat gagaactcag ctgtccagct gcaaaggaaa agccaagtga gacgggctct
1201 gggaccatgg tgaccaggct cttcccctgc tccctggccc tcgccagctg ccaggctgaa
1261 aagaagcctc agctcccaca ccgccctcct caccgccctt cctcggcagt cacttccact
1321 ggtggaccac gggcccccag ccctgtgtcg gccttgtctg tctcagctca accacagtct
1381 gacaccagag cccacttcca tcctctctgg tgtgaggcac agcgagggca gcatctggag
1441 gagctctgca gcctccacac ctaccacgac ctcccagggc tgggctcagg aaaaaccagc
1501 cactgcttta caggacaggg ggttgaagct gagccccgcc tcacacccac ccccatgcac
1561 tcaaagattg gattttacag ctacttgcaa ttcaaaattc agaagaataa aaaatgggaa
1621 catacagaac tctaaaagat agacatcaga aattgttaag ttaagctttt tcaaaaaatc
1681 agcaattccc cagcgtagtc aagggtggac actgcacgct ctggcatgat gggatggcga
1741 ccgggcaagc tttcttcctc gagatgctct gctgcttgag agctattgct ttgttaagat
1801 ataaaaaggg gtttcttttt gtctttctgt aaggtggact tccagctttt gattgaaagt
1861 cctagggtga ttctatttct gctgtgattt atctgctgaa agctcagctg gggttgtgca
1921 agctagggac ccattcctgt gtaatacaat gtctgcacca atgctaataa agtcctattc
1981 tcttttatga aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
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