LOCUS BC032749 1356 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens SET nuclear oncogene, mRNA (cDNA clone MGC:45315
IMAGE:5587291), complete cds.
ACCESSION BC032749
VERSION BC032749.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1356)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1356)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: p Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4506890.
FEATURES Location/Qualifiers
source 1..1356
/db_xref="H-InvDB:HIT000041705"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45315 IMAGE:5587291"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1356
/gene="SET"
/gene_synonym="2PP2A"
/gene_synonym="I2PP2A"
/gene_synonym="IGAAD"
/gene_synonym="IPP2A2"
/gene_synonym="PHAPII"
/gene_synonym="TAF-I"
/gene_synonym="TAF-IBETA"
/db_xref="GeneID:6418"
/db_xref="HGNC:HGNC:10760"
/db_xref="MIM:600960"
CDS 34..867
/gene="SET"
/gene_synonym="2PP2A"
/gene_synonym="I2PP2A"
/gene_synonym="IGAAD"
/gene_synonym="IPP2A2"
/gene_synonym="PHAPII"
/gene_synonym="TAF-I"
/gene_synonym="TAF-IBETA"
/codon_start=1
/product="SET nuclear oncogene"
/protein_id="AAH32749.1"
/db_xref="GeneID:6418"
/db_xref="HGNC:HGNC:10760"
/db_xref="MIM:600960"
/translation="MSAPAAKVSKKELNSNHDGADETSEKEQQEAIEHIDEVQNEIDR
LNEQASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEE
ALHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKW
KSGKDLTKRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQ
YYLVPDMDDEEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGED
D"
BASE COUNT 431 a 253 c 318 g 354 t
ORIGIN
1 ccacgcgtcc gcccccgacc gcggagcagc accatgtcgg cgccggcggc caaagtcagt
61 aaaaaggagc tcaactccaa ccacgacggg gccgacgaga cctcagaaaa agaacagcaa
121 gaagcgattg aacacattga tgaagtacaa aatgaaatag acagacttaa tgaacaagcc
181 agtgaggaga ttttgaaagt agaacagaaa tataacaaac tccgccaacc attttttcag
241 aagaggtcag aattgatcgc caaaatccca aatttttggg taacaacatt tgtcaaccat
301 ccacaagtgt ctgcactgct tggggaggaa gatgaagagg cactgcatta tttgaccaga
361 gttgaagtga cagaatttga agatattaaa tcaggttaca gaatagattt ttattttgat
421 gaaaatcctt actttgaaaa taaagttctc tccaaagaat ttcatctgaa tgagagtggt
481 gatccatctt cgaagtccac cgaaatcaaa tggaaatctg gaaaggattt gacgaaacgt
541 tcgagtcaaa cgcagaataa agccagcagg aagaggcagc atgaggaacc agagagcttc
601 tttacctggt ttactgacca ttctgatgca ggtgctgatg agttaggaga ggtcatcaaa
661 gatgatattt ggccaaaccc attacagtac tacttggttc ccgatatgga tgatgaagaa
721 ggagaaggag aagaagatga tgatgatgat gaagaggagg aaggattaga agatattgac
781 gaagaagggg atgaggatga aggtgaagaa gatgaagatg atgatgaagg ggaggaagga
841 gaggaggatg aaggagaaga tgactaaata gaacactgat ggattccaac cttccttttt
901 ttaaattttc tccagtccct gggagcaagt tgcagtcttt tttttttttt tttttttccc
961 tcttgtgctc agtcgccctg ttcttgaggt ctcttttctc tactccatgg ttctcaattt
1021 atttgggggg aaataccttg agcagaatac aatgggaaaa gagtctctac ccctttctgt
1081 tcgaagttca tttttatccc ttcctgtctg aacaaaaact gtatggaatc aacaccaccg
1141 agctctgtgg gaaaaaagaa aaacctgctc ccttcgctct gctggaagct ggagggtgct
1201 aggcccctgt gtagtagtgc atagaattct agcttttttc ctcctttctc tgtatattgg
1261 gctcagagag tacactgtgt ctctatgtga atatggacag ttagcattta ccaacatgta
1321 tctgtctact ttctcttgtt taaaaaaaaa aaaaaa
//