LOCUS BC032706 3101 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens chromosome 6 open reading frame 223, mRNA (cDNA clone
MGC:45491 IMAGE:5497384), complete cds.
ACCESSION BC032706
VERSION BC032706.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3101)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3101)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: f Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene
prediction.
FEATURES Location/Qualifiers
source 1..3101
/db_xref="H-InvDB:HIT000041681"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45491 IMAGE:5497384"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3101
/gene="C6orf223"
/db_xref="GeneID:221416"
/db_xref="HGNC:HGNC:28692"
CDS 392..1063
/gene="C6orf223"
/codon_start=1
/product="C6orf223 protein"
/protein_id="AAH32706.1"
/db_xref="GeneID:221416"
/db_xref="HGNC:HGNC:28692"
/translation="MEGSFHQKTPRHKQPTLLMVRASRRSGKTSAVLKAGRQSVSGRK
NSTSKDLVTLGASSLREERGHPLHPRHRKAVHLRTRGRTRGWVQTLARMSRRTRGPVE
RAAAAAAAAAAGGDAGHAPFPPPPAADGARAPRSPGQVTPRGLRLRLPRRESLLRGLC
RPLRPLLGFRESDSAKPASLRLLQHTPSARRNYRIAGARLMRSNYPPPLSSAALRGAG
PTRRN"
BASE COUNT 592 a 947 c 932 g 630 t
ORIGIN
1 ccacgcgtcc gggtgatgat gccactggca gaagcaggcg ccctggccca aggaggaggc
61 ccttcagcaa cggagtgggc ctgcattctg cggagggtga gactgaggtg gctgcagtca
121 aaggagaagg gggcaggggt ttgttgaggc tgtgaccgtg ggaaagcgct tctccagggc
181 ttccctcagc ttcaaggaga aagagttcag aggccctgag gggatgaagg gacttgtgaa
241 ggggcttcag ggggatgggt tggggggaag gaggttccta ttcttactcc ccttctgcct
301 atgctccccc aatgttcctg tctctcccct cccccacctt ggccccctct ttggcccctg
361 tggccaaagt tgttgaggaa ggagggagta gatggagggc tcttttcacc agaagacccc
421 caggcacaag cagcccacct tactgatggt cagagcatcc agaagaagtg gcaagacttc
481 agctgtcctc aaagcaggaa gacagagtgt ttctggcaga aagaacagca caagcaaaga
541 tctggtaacc ctaggtgcct ccagtttgag ggaggagaga ggacaccccc tccaccccag
601 acataggaaa gcagtccacc tgcgcaccag gggcaggaca cgtggctggg tgcagacgct
661 ggcccggatg tcgcggagga ctcgcgggcc ggtagagcgc gcggcggcgg cggcggcggc
721 ggcggcggcg ggaggagacg caggtcacgc ccccttccca ccacctcccg ccgccgacgg
781 ggcgcgcgcg ccgaggagcc cgggacaggt gactcctaga ggactgcgtc tgcgcctccc
841 ccggcgggag tcccttcttc gcggcctctg ccgccccctg cgtcccctcc tgggcttccg
901 agagtctgac tcagccaagc cggcatcgct tcgcctccta caacacaccc cgagcgcgag
961 aagaaattac aggattgcag gggcacggct aatgcgctct aattacccac cgccgctgtc
1021 atccgcggcg ctccgcggcg ctgggccaac gcgccgtaat taagacgccg ctccccggtc
1081 ccggaaccct cccttcgcca ccctccaccc acccacctcg cggtccccag gaccactggc
1141 tgccaactcc tgccgccctc tgggactgcc cctcagtccc aggagagcta tgaggcctca
1201 ctgggggcag aacttgggga gaccgaagcc ggcccttcca ctcccctaaa cctacagtcc
1261 tggaaggtct ctgctggaag agactgggag agtggggagg ggccagggac ctatttcgtt
1321 gacagaaaca gtgaggtcta ttggaaagtt agccttcagt gggaggagtg gcaaaggcac
1381 gcagggcagc agtacccccg tttggcactt gaggcacgga gaagggaagg gaagtccgcc
1441 cagccagaac tcccagaccc gctcgtttaa cagtggcttt atgagcagca cgacggactc
1501 cctcccctgg cggggaaatt accttcctgc gaagaaaggt gacatccccg ccacagacac
1561 ggaggccccg cctgctggcc agctgtggcc gccatagggg agctggtgag gagtgaggtg
1621 gctctggcct cccatgtcag gtagggtgag agaggccctg aagatagaag ccaggcccga
1681 aggccagaat taaaggggta gcttggccat cagctccttc ccccaaaacc aggctcagag
1741 ctctcctcta tcagcaattc tttcctgagg tccagggtgt tgcaaactca tggccttggg
1801 ccacgtttta ccttcagtga ggttttgttt ggcttgcaat gagtacatgg gttttaggtt
1861 gaatgtgaga gtctgcagac aatgtgggtt ctccgactgc cctcccagtg aaggtggacc
1921 tctgatttag accggcccgc tgggcccgtg cctacatcct tttcctcagc gtcaggatct
1981 tagtccccat gattgctgcc cctttgtggt ctgcatgttt cttggtaagg gtgcccagtc
2041 aagtgtctct gggagccccc tcttctctgt catcgtcagg ctccccactt gcagtggccg
2101 tggtggctgc acatgctccc ggatacccct ccagcactcc cttttgtcat cttgagtttc
2161 agtccgtgac ttgggtggca ccctatcttc tccatcaggg atggtagcta tttttctgcc
2221 atgagactag aggttgcttg agaacaggaa attggatctc tcccttcagg ctgggatttc
2281 actaagggct ggagaagggg ggaatatggg aggattatct cctatcacag ggagcgctct
2341 gagggcaagg ctgtgtctcc gattcagact gacggttccc tgaggatggg gctgtttctc
2401 ccctccgact ggggctccct gaggatgggg ctgtttctcc cctccgactg gggctccctg
2461 aggacagggc tgtgtctccc ctcagcctgg ggctccctga gtcagggctg tgtctcccct
2521 cagactgggg ctccctgagg acggggctgt gtctgcctca gactgggaat ccctgaagat
2581 ggggccgtgt ctccctcaaa gtggggctcc ctcaggacag cgttgtgtct cccctcagac
2641 tgcggctccc tgaggacggg gctgtgtctc cctcagactg gggctccctg aagaaagggc
2701 tgcttctccc tcagactgga gctccctgaa gatggggctg tgtccccctc agactggggc
2761 tgcctgagga tgaggctgca tctcccctca gactggagct ccctgagggc agggctgtct
2821 ccccccttca gactggggcc tcccccaaag gacagggact gtgtctcccc tgggactagg
2881 ttctttgtgt cttctgcatc agacagattc ccatgaggac agggctgtct ccccctccat
2941 ctggagctcc ctgaaggcaa tggcctctcc cctcaaatgg gacatttgca ccccacccca
3001 ccctctggct ccccatggcg cccaggcatt cctcccagga caccatttgt cacgctttga
3061 tgaatgaaac ttactaagaa taactcaaaa aaaaaaaaaa a
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