LOCUS BC032691 2628 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens Bardet-Biedl syndrome 7, mRNA (cDNA clone MGC:45066
IMAGE:5240398), complete cds.
ACCESSION BC032691
VERSION BC032691.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2628)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2628)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: b Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29029556.
FEATURES Location/Qualifiers
source 1..2628
/db_xref="H-InvDB:HIT000041671"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45066 IMAGE:5240398"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2628
/gene="BBS7"
/gene_synonym="BBS2L1"
/gene_synonym="FLJ10715"
/db_xref="GeneID:55212"
/db_xref="HGNC:HGNC:18758"
/db_xref="MIM:607590"
CDS 102..2120
/gene="BBS7"
/gene_synonym="BBS2L1"
/gene_synonym="FLJ10715"
/codon_start=1
/product="Bardet-Biedl syndrome 7"
/protein_id="AAH32691.1"
/db_xref="GeneID:55212"
/db_xref="HGNC:HGNC:18758"
/db_xref="MIM:607590"
/translation="MDLILNRMDYLQVGVTSQKTMKLIPASRHRATQKVVIGDHDGVV
MCFGMKKGEAAAVFKTLPGPKIARLELGGVINTPQEKIFIAAASEIRGFTKRGKQFLS
FETNLTESIKAMHISGSDLFLSASYIYNHYCDCKDQHYYLSGDKINDVICLPVERLSR
ITPVLACQDRVLRVLQGSDVMYAVEVPGPPTVLALHNGNGGDSGEDLLFGTSDGKLAL
IQITTSKPVRKWEIQNEKKRGGILCIDSFDIVGDGVKDLLVGRDDGMVEVYSFDNANE
PVLRFDQMLSESVTSIQGGCVGKDSYDEIVVSTYSGWVTGLTTEPIHKESGPGEELKI
NQEMQNKISSLRNELEHLQYKVLQERENYQQSSQSSKAKSAVPSFGINDKFTLNKDDA
SYSLILEVQTAIDNVLIQSDVPIDLLDVDKNSAVVSFSSCDSESNDNFLLATYRCQAD
TTRLELKIRSIEGQYGTLQAYVTPRIQPKTCQVRQYHIKPLSLHQRTHFIDHDRPMNT
LTLTGQFSFAEVHSWVVFCLPEVPEKPPAGECVTFYFQNTFLDTQLESTYRKGEGVFK
SDNISTISILKDVLSKEATKRKINLNISYEINEVSVKHTLKLIHPKLEYQLLLAKKVQ
LIDALKELQIHEGNTNFLIPEYHCILEEADHLQEEYKKQPAHLERLYG"
BASE COUNT 917 a 477 c 528 g 706 t
ORIGIN
1 gggcgcgggc agccttctga ctgggtcgga ggcctgcggg cccgaagcct ctgtccctcc
61 tgttcttgtc cggcgctgct tagcccctcc gcgtagtcat catggatctg attttaaacc
121 gaatggatta tctgcaggtg ggagtaacat ctcagaagac tatgaagcta attcctgcct
181 caagacacag agctacacaa aaggtggtta ttggagatca tgatggggta gttatgtgct
241 ttggcatgaa gaaaggagaa gcagcagcag tgttcaagac tttacccggg ccgaagattg
301 caaggctgga actgggaggg gttatcaaca cacctcagga gaaaattttt attgctgcag
361 catctgagat tagaggcttc acaaaaagag gaaaacagtt cctctccttt gaaacaaacc
421 tcactgaaag cattaaagct atgcacatat ctggctcaga cctctttctc agtgcaagtt
481 acatctataa ccattattgt gactgcaaag accaacatta ttacctttct ggggataaaa
541 tcaatgatgt gatctgcctt ccagtggaaa gattatctcg tatcacacct gtattggcct
601 gccaggacag agtgctcaga gttttacagg gatctgatgt gatgtatgca gttgaagttc
661 ctggaccccc tactgtctta gcactacaca atggaaatgg cggtgactct ggagaagacc
721 ttttgtttgg gacatcagac ggaaaacttg cgcttataca gattactaca tccaaaccag
781 tacgcaagtg ggaaattcaa aatgagaaaa agagaggagg tattttgtgt attgacagct
841 ttgacattgt gggtgatggg gttaaagatt tacttgttgg gagagatgac ggaatggtgg
901 aagtgtatag ttttgataat gcaaatgaac ctgttctacg atttgatcag atgttgtctg
961 aaagcgtcac atctatccag ggtggttgtg taggaaaaga cagctatgat gaaatcgtgg
1021 tgtccacata ttcaggctgg gttacaggtc tgacaacaga gcccattcat aaggaaagtg
1081 gaccaggaga agaactaaaa attaatcagg agatgcagaa taaaatttct tccttacgga
1141 atgagttgga acatttgcag tataaggtat tgcaggaaag agagaattat caacagtctt
1201 ctcaatcaag caaagcaaaa tcagcagtac cttcctttgg tataaatgat aaatttacac
1261 taaataaaga tgatgccagt tacagcctta tcttagaggt acagactgca atagataatg
1321 tcttaataca gagtgatgtt ccaatagatt tacttgatgt ggataaaaat tctgctgttg
1381 ttagctttag cagctgtgat tctgagtcaa acgacaactt ccttcttgcc acttatcggt
1441 gccaggcaga tactacaagg ctggaactca agattcgctc aattgaaggc cagtatggca
1501 cactacaagc atatgtgact ccaagaattc aacccaaaac ctgtcaggtc cgccagtacc
1561 acatcaaacc tctttcactc catcaaagaa ctcactttat tgatcatgac agacccatga
1621 atacactgac cctaacaggc cagttcagtt ttgctgaagt tcactcctgg gtggtttttt
1681 gtctgcctga agttccagaa aaacctccag caggagaatg tgtgacattt tactttcaga
1741 acacctttct agatacacaa cttgaaagta cctacagaaa aggagaggga gtttttaaat
1801 ctgacaacat ttctactatc tccatcctaa aagatgtgct ttctaaagaa gctacaaaaa
1861 ggaaaattaa cctcaacata tcatacgaga taaatgaagt atcagtcaaa cacactttaa
1921 agctaatcca cccaaagctg gagtaccagt tgcttttggc taagaaagtg cagttaattg
1981 atgctttaaa agaattacag attcatgagg gaaatacgaa ctttctgata ccagaatatc
2041 actgtattct agaagaggca gatcacctac aggaagaata caaaaagcaa cctgcacatc
2101 ttgaaagact ctatggttag tggaccattc tagaatacct tgccatattt cttttcaact
2161 ggctatttcc caaggatcat gtaagagaag ctgggcagaa agataaaaag attacatcag
2221 tcatgattca tgaaccagtc atgaatcagt tgacaacaaa tttattgcac agaatatttc
2281 tgtattttgt caagctactt ttaatattta attcttttac ttgataaaat gcaagtatat
2341 taagaaataa gtatactgtg atgaattaat ctatatatat gaacaaacct ggtataaaat
2401 gaatgtaatc tatgaacctg tagagcttag actgtatttc acacaaataa ttgtcatgtt
2461 ttgttgctat tgtgaattat aaaaatgcag catttaaaat ttttaaggca aaatttaata
2521 aaggatatac agtaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2581 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
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