LOCUS BC032644 1627 bp mRNA linear HUM 01-JUN-2004
DEFINITION Homo sapiens family with sequence similarity 40, member A, mRNA
(cDNA clone IMAGE:5521489), partial cds.
ACCESSION BC032644
VERSION BC032644.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1627)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1627)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: h Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4506562.
FEATURES Location/Qualifiers
source 1..1627
/db_xref="H-InvDB:HIT000092742"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5521489"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1627
/gene="FAM40A"
/gene_synonym="FLJ14743"
/gene_synonym="KIAA1761"
/db_xref="GeneID:85369"
CDS <1..874
/gene="FAM40A"
/gene_synonym="FLJ14743"
/gene_synonym="KIAA1761"
/codon_start=2
/product="FAM40A protein"
/protein_id="AAH32644.1"
/db_xref="GeneID:85369"
/translation="HASEEMPTTVLQSMKLGVDVNRHKEVIVKAISAVLLLLLKHFKL
NHVYQFEYMAQHLVFANCIPLILKFFNQNIMSYITAKNSISVLDYPHCVVHELPELTA
ESLEAGDSNQFCWRNLFSCINLLRILNKLTKWKHSRTMMLVVFKSAPILKRALKVKQA
MMQLYVLKLLKVQTKYLGRQWRKSNMKTMSAIYQKVRHRLNDDWAYGNDLDARPWDFQ
AEECALRANIERFNARRYDRAHSNPDFLPVDNCLQSVLGQRVDLPEDFQMNYDLWLER
EVFSKPISWEELLQ"
BASE COUNT 390 a 396 c 426 g 415 t
ORIGIN
1 ccacgcgtcc gaggagatgc ccaccacagt gttgcagagc atgaagctgg gggtggatgt
61 aaaccgccac aaagaggtca ttgttaaggc catttctgct gtcctgctgc tgctgctcaa
121 gcactttaag ttgaaccatg tctaccagtt tgaatacatg gcccagcacc tggtgtttgc
181 caactgcatt cctttgatcc taaagttctt caatcaaaac atcatgtcct acatcactgc
241 caagaacagc atttctgtcc tggattaccc tcactgcgtg gtgcatgagc tgccagagct
301 gacggcggag agtttggaag caggtgacag taaccaattt tgctggagga acctcttttc
361 ttgtatcaat ctgcttcgga tcttgaacaa gctgacaaag tggaagcatt caaggacaat
421 gatgctggtg gtgttcaagt cagcccccat cttgaagcgg gccctaaagg tgaaacaagc
481 catgatgcag ctctatgtgc tgaagctgct caaggtacag accaaatact tggggcggca
541 gtggcgaaag agcaacatga agaccatgtc tgccatctac cagaaggtgc ggcatcggct
601 gaacgacgac tgggcatacg gcaatgatct tgatgcccgg ccttgggact tccaggcaga
661 ggagtgtgcc cttcgtgcca acattgaacg cttcaacgcc cggcgctatg accgggccca
721 cagcaaccct gacttcctgc cagtggacaa ctgcctgcag agtgtcctgg gccaacgggt
781 ggacctccct gaggactttc agatgaacta tgacctctgg ttagaaaggg aggtcttctc
841 caagcccatt tcctgggaag agctgctgca gtgaggctgt tggttagggg actgaaatgg
901 agagaaaaga tgatctgaag gtacctgtgg gactgtccta gttcattgct gcagtgctcc
961 catcccccac caggtggcag cacagcccca ctgtgtcttc cgcagtctgt cctgggcttg
1021 ggtgagccca gcttgacctc cccttggttc ccagggtcct gctccgaagc agtcatctct
1081 gcctgagatc cattcttcct ttacttcccc caccctcctc tcttggatat ggttggtttt
1141 ggctcatttc acaatcagcc caaggctggg aaagctggaa tgggatggga acccctccgc
1201 cgtgcatctg aatttcaggg gtcatgctga tgcctctcga gacatacaaa tccttgcttt
1261 gtcagcttgc aaaggaggag agtttaggat tagggccagg gccagaaagt cggtatcttg
1321 gttgtgctct ggggtggggg tggggtgttt ctgatgttat tccagcctcc tgctacatta
1381 tatccagaag taattgcgga ggctccttca gctgcctcag cactttgatt ttggacaggg
1441 acaaggtagg aagagaagct tcccttaacc agaggggcca tttttccttt tggctttcga
1501 gggcctgtaa atatctatat ataattctgt gtgtattctg tgtcatgttg gggtttttaa
1561 tgtgattgtg tattctgttt acattaaaaa gaagcaaaaa taaaaaaaaa aaaaaaaaaa
1621 aaaaaaa
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