LOCUS BC032602 2753 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens myxovirus (influenza virus) resistance 1,
interferon-inducible protein p78 (mouse), mRNA (cDNA clone
MGC:44833 IMAGE:5535278), complete cds.
ACCESSION BC032602
VERSION BC032602.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2753)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2753)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: k Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18490989.
FEATURES Location/Qualifiers
source 1..2753
/db_xref="H-InvDB:HIT000041628"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:44833 IMAGE:5535278"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2753
/gene="MX1"
/gene_synonym="IFI-78K"
/gene_synonym="IFI78"
/gene_synonym="MX"
/gene_synonym="MxA"
/db_xref="GeneID:4599"
/db_xref="HGNC:HGNC:7532"
/db_xref="MIM:147150"
CDS 292..2280
/gene="MX1"
/gene_synonym="IFI-78K"
/gene_synonym="IFI78"
/gene_synonym="MX"
/gene_synonym="MxA"
/codon_start=1
/product="myxovirus (influenza virus) resistance 1,
interferon-inducible protein p78 (mouse)"
/protein_id="AAH32602.1"
/db_xref="GeneID:4599"
/db_xref="HGNC:HGNC:7532"
/db_xref="MIM:147150"
/translation="MVVSEVDIAKADPAAASHPLLLNGDATVAQKNPGSVAENNLCSQ
YEEKVRPCIDLIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIV
TRCPLVLKLKKLVNEDKWRGKVSYQDYEIEISDASEVEKEINKAQNAIAGEGMGISHE
LITLEISSRDVPDLTLIDLPGITRVAVGNQPADIGYKIKTLIKKYIQRQETISLVVVP
SNVDIATTEALSMAQEVDPEGDRTIGILTKPDLVDKGTEDKVVDVVRNLVFHLKKGYM
IVKCRGQQEIQDQLSLSEALQREKIFFENHPYFRDLLEEGKATVPCLAEKLTSELITH
ICKSLPLLENQIKETHQRITEELQKYGVDIPEDENEKMFFLIDKINAFNQDITALMQG
EETVGEEDIRLFTRLRHEFHKWSTIIENNFQEGHKILSRKIQKFENQYRGRELPGFVN
YRTFETIVKQQIKALEEPAVDMLHTVTDMVRLAFTDVSIKNFEEFFNLHRTAKSKIED
IRAEQEREGEKLIRLHFQMEQIVYCQDQVYRGALQKVREKELEEEKKKKSWDFGAFQS
SSATDSSMEEIFQHLMAYHQEASKRISSHIPLIIQFFMLQTYGQQLQKAMLQLLQDKD
TYSWLLKERSDTSDKRKFLKERLARLTQARRRLAQFPG"
BASE COUNT 760 a 685 c 724 g 584 t
ORIGIN
1 ccacgcgtcc gcccagtgtc acggtggaca cgcctccctc gcgcccttgc cgcccacctg
61 ctcacccagc tcaggggctt tggaattctg tggccacact gcgaggagat cggttctggg
121 tcggaggcta caggaagact cccactccct gaaatctgga gtgaagaacg ccgccatcca
181 gccaccattc caaggaggtg caggagaaca gctctgtgat accatttaac ttgttgacat
241 tacttttatt tgaaggaacg tatattagag cttactttgc aaagaaggaa gatggttgtt
301 tccgaagtgg acatcgcaaa agctgatcca gctgctgcat cccaccctct attactgaat
361 ggagatgcta ctgtggccca gaaaaatcca ggctcggtgg ctgagaacaa cctgtgcagc
421 cagtatgagg agaaggtgcg cccctgcatc gacctcattg actccctgcg ggctctaggt
481 gtggagcagg acctggccct gccagccatc gccgtcatcg gggaccagag ctcgggcaag
541 agctccgtgt tggaggcact gtcaggagtt gcccttccca gaggcagcgg gatcgtgacc
601 agatgcccgc tggtgctgaa actgaagaaa cttgtgaacg aagataagtg gagaggcaag
661 gtcagttacc aggactacga gattgagatt tcggatgctt cagaggtaga aaaggaaatt
721 aataaagccc agaatgccat cgccggggaa ggaatgggaa tcagtcatga gctaatcacc
781 ctggagatca gctcccgaga tgtcccggat ctgactctaa tagaccttcc tggcataacc
841 agagtggctg tgggcaatca gcctgctgac attgggtata agatcaagac actcatcaag
901 aagtacatcc agaggcagga gacaatcagc ctggtggtgg tccccagtaa tgtggacatt
961 gccaccacag aggctctcag catggcccag gaggtggacc ccgagggaga caggaccatc
1021 ggaatcttga cgaagcctga tctggtggac aaaggaactg aagacaaggt tgtggacgtg
1081 gtgcggaacc tcgtgttcca cctgaagaag ggttacatga ttgtcaagtg ccggggccag
1141 caggagatcc aggaccagct gagcctgtcc gaagccctgc agagagagaa gatcttcttt
1201 gagaaccacc catatttcag ggatctgctg gaggaaggaa aggccacggt tccctgcctg
1261 gcagaaaaac ttaccagcga gctcatcaca catatctgta aatctctgcc cctgttagaa
1321 aatcaaatca aggagactca ccagagaata acagaggagc tacaaaagta tggtgtcgac
1381 ataccggaag acgaaaatga aaaaatgttc ttcctgatag ataaaattaa tgcctttaat
1441 caggacatca ctgctctcat gcaaggagag gaaactgtag gggaggaaga cattcggctg
1501 tttaccagac tccgacacga gttccacaaa tggagtacaa taattgaaaa caattttcaa
1561 gaaggccata aaattttgag tagaaaaatc cagaaatttg aaaatcagta tcgtggtaga
1621 gagctgccag gctttgtgaa ttacaggaca tttgagacaa tcgtgaaaca gcaaatcaag
1681 gcactggaag agccggctgt ggatatgcta cacaccgtga cggatatggt ccggcttgct
1741 ttcacagatg tttcgataaa aaattttgaa gagtttttta acctccacag aaccgccaag
1801 tccaaaattg aagacattag agcagaacaa gagagagaag gtgagaagct gatccgcctc
1861 cacttccaga tggaacagat tgtctactgc caggaccagg tatacagggg tgcattgcag
1921 aaggtcagag agaaggagct ggaagaagaa aagaagaaga aatcctggga ttttggggct
1981 ttccaatcca gctcggcaac agactcttcc atggaggaga tctttcagca cctgatggcc
2041 tatcaccagg aggccagcaa gcgcatctcc agccacatcc ctttgatcat ccagttcttc
2101 atgctccaga cgtacggcca gcagcttcag aaggccatgc tgcagctcct gcaggacaag
2161 gacacctaca gctggctcct gaaggagcgg agcgacacca gcgacaagcg gaagttcctg
2221 aaggagcggc ttgcacggct gacgcaggct cggcgccggc ttgcccagtt ccccggttaa
2281 ccacactctg tccagccccg tagacgtgca cgcacactgt ctgcccccgt tcccgggtag
2341 ccactggact gacgacttga gtgctcagta gtcagactgg atagtccgtc tctgcttatc
2401 cgttagccgt ggtgatttag caggaagctg tgagagcagt ttggtttcta gcatgaagac
2461 agagccccac cctcagatgc acatgagctg gcgggattga aggatgctgt cttcgtactg
2521 ggaaagggat tttcagccct cagaatcgct ccaccttgca gctctcccct tctctgtatt
2581 cctagaaact gacacatgct gaacatcaca gcttatttcc tcatttttat aatgtccctt
2641 cacaaaccca gtgttttagg agcatgagtg ccgtgtgtgt gcgtcctgtc ggagccctgt
2701 ctcctctctc tgtaataaac tcatttctag cagacaaaaa aaaaaaaaaa aaa
//