LOCUS BC032565 2022 bp mRNA linear SYN 02-SEP-2016 DEFINITION Synthetic construct Homo sapiens LAG1 homolog, ceramide synthase 5, mRNA (cDNA clone MGC:45411 IMAGE:5580489), complete cds. ACCESSION BC032565 VERSION BC032565.1 KEYWORDS MGC. SOURCE synthetic construct ORGANISM synthetic construct other sequences; artificial sequences. REFERENCE 1 (bases 1 to 2022) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2022) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 69 Row: o Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 22218344. FEATURES Location/Qualifiers source 1..2022 /db_xref="H-InvDB:HIT000041606" /organism="synthetic construct" /mol_type="mRNA" /isolation_source="Homo sapiens; Eye, retinoblastoma" /db_xref="taxon:32630" /clone="MGC:45411 IMAGE:5580489" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2022 /gene="LASS5" /gene_synonym="CerS5" /gene_synonym="Trh4" /db_xref="GeneID:91012" /db_xref="HGNC:HGNC:23749" CDS 54..1232 /gene="LASS5" /gene_synonym="CerS5" /gene_synonym="Trh4" /codon_start=1 /transl_table=11 /product="LAG1 homolog, ceramide synthase 5" /protein_id="AAH32565.1" /db_xref="GeneID:91012" /db_xref="HGNC:HGNC:23749" /translation="MATAAQGPLSLLWGWLWSERFWLPENVSWADLEGPADGYGYPRG RHILSVFPLAAGIFFVRLLFERFIAKPCALCIGIEDSGPYQAQPNAILEKVFISITKY PDKKRLEGLSKQLDWNVRKIQCWFRHRRNQDKPPTLTKFCESMWRFTFYLCIFCYGIR FLWSSPWFWDIRQCWHNYPFQPLSSGLYHYYIMELAFYWSLMFSQFTDIKRKDFLIMF VHHLVTIGLISFSYINNMVRVGTLIMCLHDVSDFLLEAAKLANYAKYQRLCDTLFVIF SAVFMVTRLGIYPFWILNTTLFESWEIIGPYASWWLLNGLLLTLQLLHVIWSYLIARI ALKALIRGKVSKDDRSDVESSSEEEDVTTCTKSPCDSSSSNGANRVNGHMGGSYWAEE " BASE COUNT 486 a 480 c 501 g 555 t ORIGIN 1 ccacgcgtcc gcccacgcgt ccgcccacgc gtccgcttcg gggtgggcgt aagatggcga 61 cagcagcgca gggaccccta agcttgctgt ggggctggct gtggagcgag cgcttctggc 121 tacccgagaa cgtgagctgg gctgatctgg aggggccggc cgacggctac ggttaccccc 181 gcggccggca catcctctcg gtgttcccgc tggcggcggg catcttcttc gtgaggctgc 241 tcttcgagcg atttattgcc aaaccctgtg cactctgtat tggcatcgag gacagtggtc 301 cttatcaggc ccaacccaat gccatccttg aaaaggtgtt catatctatt accaagtatc 361 ctgataagaa aaggctggag ggcctgtcaa agcagctgga ttggaatgtc cgaaaaatcc 421 aatgctggtt tcgccatcgg aggaatcagg acaagccccc aacgcttact aaattctgtg 481 aaagcatgtg gagattcaca ttttatttat gtatattctg ctatggaatt agatttctct 541 ggtcgtcacc ttggttctgg gacatccgac agtgctggca taactatcca tttcagcctc 601 tttcaagtgg gctttatcac tattatatca tggaattggc cttctattgg tcccttatgt 661 tttctcagtt tacagacatt aaaagaaagg acttcctgat catgtttgtg catcacttgg 721 tcaccattgg gcttatctcc ttctcctaca tcaacaatat ggttcgagtg ggaactctga 781 tcatgtgtct acatgatgtc tcagacttct tgctggaggc agccaaactg gccaattatg 841 ccaagtatca gcggctctgt gacacccttt ttgtgatctt cagtgctgtt tttatggtta 901 cacgactagg aatctatcca ttctggattc tgaacacgac cctctttgag agttgggaga 961 taatcgggcc ttatgcttca tggtggctcc tcaatggcct gctgctgacc ctacagcttc 1021 tgcatgtcat ctggtcctac ctaattgcac ggattgcttt gaaagccttg atcaggggaa 1081 aggtatcgaa ggatgatcgc agtgatgtgg agagcagctc agaggaagaa gatgtgacca 1141 cctgcacaaa aagtccctgt gacagtagct ccagcaatgg tgccaatcgg gtgaatggtc 1201 acatgggagg cagctactgg gctgaagagt aaggtggttg ctatagggac ttcagcacac 1261 atggacttgt agggccactg gcaacatact cctcttggcc cttcccatat ctactcttct 1321 gtgattggga gactgcaagg cactgaggag tatcaaagaa gcaaatattt tcactttgaa 1381 agaaaactgc cattttgtat ttaatagcct ccaggttctt tcagtaatgt tatttgctct 1441 gtgtgttttt gtgtgtttgt tgatgtgcgt ttgtgcatat gcgtgagttt cattgccggg 1501 gttggggcac aattgtggac tggggccatg aggccttccc tggtccccac tgaacccacc 1561 ttagttccac atttggctgc atcttgaatt atgccaactc cagacttctc cttctttttt 1621 gcccttggct cttgacactc taaacccctg gaccatctga atggagcagc caagttcagt 1681 cccacatttc tgtactgttc ctctttcaca gctggaatat gtcacatgat gaagttgtat 1741 agaaacagaa ccatggatgg atggccagga ttgccgtggt ccctagctag atccccttcc 1801 tatcaatcac ctgatagcaa cagggacagc tgccaatacc ctgctcttta ctcaatggta 1861 cccagggagg gagcatggga agagggtgag ctgagggctg gaggagggca acagccactg 1921 ggtgagctgt tcacggtctt atactattgt ttgtttgtga ttaaaagtgc ttcaacccaa 1981 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa //