LOCUS BC032542 3925 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens fucokinase, mRNA (cDNA clone MGC:45494 IMAGE:5534376),
complete cds.
ACCESSION BC032542
VERSION BC032542.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3925)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3925)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: k Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 63175653.
FEATURES Location/Qualifiers
source 1..3925
/db_xref="H-InvDB:HIT000041593"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45494 IMAGE:5534376"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3925
/gene="FUK"
/gene_synonym="1110046B12Rik"
/gene_synonym="FLJ39408"
/db_xref="GeneID:197258"
/db_xref="HGNC:HGNC:29500"
/db_xref="MIM:608675"
CDS 65..3319
/gene="FUK"
/gene_synonym="1110046B12Rik"
/gene_synonym="FLJ39408"
/codon_start=1
/product="fucokinase"
/protein_id="AAH32542.2"
/db_xref="GeneID:197258"
/db_xref="HGNC:HGNC:29500"
/db_xref="MIM:608675"
/translation="MEQPKGVDWTVIILTCQYKDSVQVFQRELEVRQKREQIPAGTLL
LAVEDPEKRVGSGGATLNALLVAAEHLSARAGFTVVTSDVLHSAWILILHMGRDFPFD
DCGRAFTCLPVENPEAPVEALVCNLDCLLDIMTYRLGPGSPPGVWVCSTDMLLSVPAN
PGISWDSFRGARVIALPGSPAYAQNHGVYLTDPQGLVLDIYYQGTEAEIQRCVRPDGR
VPLVSGVVFFSVETAERLLATHVSPPLDACTYLGLDSGARPVQLSLFFDILHCMAENV
TREDFLVGRPPELGQGDADVAGYLQSARAQLWRELRDQPLTMAYVSSGSYSYMTSSAS
EFLLSLTLPGAPGAQIVHSQVEEQQLLAAGSSVVSCLLEGPVQLGPGSVLQHCHLQGP
IHIGAGCLVTGLDTAHSKALHGRELRDLVLQGHHTRLHGSPGHAFTLVGRLDSWERQG
AGTYLNVPWSEFFKRTGVRAWDLWDPETLPAEYCLPSARLFPVLHPSRELGPQDLLWM
LDHQEDGGEALRAWRASWRLSWEQLQPCLDRAATLASRRDLFFRQALHKARHVLEARQ
DLSLRPLIWAAVREGCPGPLLATLDQVAAGAGDPGVAARALACVADVLGCMAEGRGGL
RSGPAANPEWMRPFSYLECGDLAAGVEALAQERDKWLSRPALLVRAARHYEGAGQILI
RQAVMSAQHFVSTEQVELPGPGQWVVAECPARVDFSGGWSDTPPLAYELGGAVLGLAV
RVDGRRPIGARARRIPEPELWLAVGPRQDEMTVKIVCRCLADLRDYCQPHAPGALLKA
AFICAGIVHVHSELQLSEQLLRTFGGGFELHTWSELPHGSGLGTSSILAGTALAALQR
AAGRVVGTEALIHAVLHLEQVLTTGGGWQDQVGGLMPGIKVGRSRAQLPLKVEVEEVT
VPEGFVQKLNDHLLLVYTGKTRLARNLLQDVLRSWYARLPAVVQNAHSLVRQTEECAE
GFRQGSLPLLGQCLTSYWEQKKLMAPGCEPLTVRRMMDVLAPHVHGQSLAGAGGGGFL
YLLTKEPQQKEALEAVLAKTEGLGNYSIHLVEVDTQGLSLKLLGTEASTCCPFP"
BASE COUNT 679 a 1201 c 1290 g 755 t
ORIGIN
1 ccacgcgtcc ggcccgctcc gccgagcgcc gggcgacggc aggaagcccc tccgcttggc
61 cagaatggag cagccgaagg gagttgattg gacagtcatc atcctgacct gccagtacaa
121 ggacagtgtc caggtctttc agagagaact ggaagtgcgg cagaagcggg agcagatccc
181 tgctgggacg ctgttactgg ccgtggagga cccagagaag cgtgtgggca gcggaggagc
241 caccctcaac gccctgctgg tggctgctga acacctgagt gcccgggcag gcttcactgt
301 ggtcacatcc gatgtcctgc actcggcctg gatcctcatt ctgcacatgg gtcgagactt
361 cccctttgat gactgtggca gggctttcac ctgcctcccc gtggagaacc ccgaggcccc
421 cgtggaagcc ttggtctgca acctggactg cctgctggac atcatgacct atcggctggg
481 cccgggctcc ccgccaggcg tgtgggtctg cagcaccgac atgctgctgt ctgttcctgc
541 aaatcctggt atcagctggg acagcttccg gggagccaga gtgatcgccc tcccagggag
601 cccggcctac gctcagaatc atggcgtcta cctaactgac ccccagggcc ttgttttgga
661 catttactac cagggcactg aggcagagat tcagcggtgt gtcaggcctg atgggcgggt
721 gccactggtc tctggggttg tcttcttctc tgtggagact gccgagcgcc tcctagccac
781 ccacgtgagc ccgcccctgg atgcctgcac ctacctaggc ttggactccg gagcccggcc
841 tgtccagctg tctctgtttt ttgacattct ccactgcatg gctgagaacg tgaccaggga
901 ggacttcctg gtggggaggc ccccagagtt ggggcaaggc gatgcagatg tagcgggtta
961 tctgcagagc gcccgggccc agctgtggag ggagcttcgc gatcagcccc ttaccatggc
1021 ctatgtctcc agcggcagct acagctacat gacctcctca gccagtgagt tcctgctcag
1081 cctcacactc cccggggctc ctggggccca gattgtgcac tcccaggtgg aggagcagca
1141 gcttctggcg gccgggagct ctgtggtcag ctgcctgctg gagggccctg tccagctggg
1201 tcctgggagc gtcctgcagc actgccacct gcagggcccc attcacatag gcgctggctg
1261 cttggtgact ggcctggata cagcccactc caaggccctg catggccggg agctgcgtga
1321 ccttgtcctg cagggacacc acacgcggct acacggctcc ccgggccacg ccttcaccct
1381 cgttggccgt ctggacagct gggagagaca gggggcaggc acatatctca acgtgccctg
1441 gagtgaattc ttcaagagga caggtgttcg agcctgggac ctgtgggacc ctgagacgct
1501 gcccgcagag tactgccttc ccagcgcccg cctctttcct gtgctccacc cctcgaggga
1561 gctgggaccc caggacctgc tgtggatgct ggaccaccag gaggatgggg gcgaggccct
1621 gcgagcctgg cgggcctcct ggcgcctgtc ctgggagcag ctgcagccgt gcctggatcg
1681 ggctgccacg ctggcctctc gccgggacct gttcttccgc caggccctgc ataaggcgcg
1741 gcacgtgctg gaggcccggc aggacctcag cctgcgcccg ctgatctggg ctgctgtccg
1801 cgagggctgc cccgggcccc tgctggccac gctggaccag gttgcagctg gggcaggaga
1861 ccctggtgtg gcggcacggg cactggcctg tgtggcggac gtcctgggct gcatggcaga
1921 gggccgtggg ggcttgcgga gcgggccagc tgccaaccct gagtggatgc ggcccttctc
1981 atacctggag tgtggagacc tggcagcggg cgtggaggcg cttgcccagg agagggacaa
2041 gtggctaagc aggccagcct tgctggtgcg agcggcccgc cactatgagg gggctggtca
2101 gatcctgatc cgccaggctg tgatgtcagc ccagcacttt gtctccacag agcaggtgga
2161 actgccggga cctgggcagt gggtggtggc tgagtgcccg gcccgtgtgg atttctctgg
2221 gggctggagt gacacgccac cccttgccta tgagcttggc ggggctgtgc tgggcctggc
2281 tgtgcgagtg gacggccgcc ggcccatcgg agccagggca cgccgcatcc cggagcctga
2341 gctgtggctg gcggtggggc ctcggcagga tgagatgact gtgaagatag tgtgccggtg
2401 cctggctgac ctgcgggact actgccagcc tcatgcccca ggggccctgc tgaaggcggc
2461 cttcatctgt gcagggatcg tgcatgtcca ctcggaactc cagctgagtg agcagctgct
2521 ccgcaccttc gggggcggct ttgagctgca cacctggtct gagctgcccc acggctctgg
2581 cctgggcacc agcagcatcc tggcaggcac tgccctggct gccttgcagc gagccgcagg
2641 ccgggtggtg ggcacggaag ccctgatcca cgcagtgctg cacctggagc aggtgctcac
2701 cactggaggt ggctggcagg accaagtagg tggcctaatg cctggcatca aggtggggcg
2761 ctcccgggct cagctgccac tgaaggtgga ggtagaagag gtcacggtgc ctgagggctt
2821 tgtccagaag ctcaatgacc acctgctctt ggtgtacact ggcaagaccc gcctggctcg
2881 gaacctgctg caggatgtgc tgaggagctg gtatgcccga cttcctgctg tggtgcagaa
2941 tgcccacagc ctggtacggc aaactgagga gtgtgctgaa ggcttccgcc aaggaagcct
3001 gcctctgctg ggccagtgcc tgacctcgta ctgggagcag aagaagctca tggctccagg
3061 ctgtgagccc ctgactgtgc ggcgtatgat ggatgtcctg gccccccacg tgcatggcca
3121 gagcctggct ggggcaggcg gtggaggctt tctctatctg ttgaccaagg agccacagca
3181 aaaggaggcc ttggaggcgg tgctggccaa gaccgagggc cttgggaatt acagcatcca
3241 cctggttgaa gtggacactc agggcctgag cctgaagctg ctggggaccg aggcctcaac
3301 ctgttgccct ttcccatgaa gctggcttct ctctgcaaca ggagaaaacc tggagctaca
3361 gtgtccccca ccttccttgc cccatgggaa cctccacctc ctactcccca cccacctctg
3421 cgaatctgct cccaaaggaa gctgaccaga gcaagatctg ggcaagcaga gagtgcctgg
3481 gacaggactg tgacctggtg gacaggggcc tagatgtagc ctctgttcct cctggacata
3541 ggaaggtccc aagcttagta tcccacgtgg cctttacaaa tcctatggct ggccttctca
3601 ttccacaagg gccctggaaa gggttgacag ccagccttgg catatggctg ggagtccctt
3661 agcaaggcca accctgaaga ggccctttga ggcattccct atggcttaga gttgtagact
3721 tacactcaac cctcatgtga gcgtgggagt gagggtggcg gtcccttgcc aagttggtag
3781 cagtgaccca gtgattcact gccatcccag gccttaacta gcaaaactac ggagcgtgcc
3841 aagtgacctg gtgcctgtgg gaagtgggtt ctcaggactg gcattcttgg aataaattca
3901 ctctgtcctt aaaaaaaaaa aaaaa
//