LOCUS BC032539 1953 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens mitogen-activated protein kinase 9, mRNA (cDNA clone
MGC:45322 IMAGE:5528624), complete cds.
ACCESSION BC032539
VERSION BC032539.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1953)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1953)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: i Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21237735.
FEATURES Location/Qualifiers
source 1..1953
/db_xref="H-InvDB:HIT000041591"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45322 IMAGE:5528624"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1953
/gene="MAPK9"
/gene_synonym="JNK-55"
/gene_synonym="JNK2"
/gene_synonym="JNK2A"
/gene_synonym="JNK2ALPHA"
/gene_synonym="JNK2B"
/gene_synonym="JNK2BETA"
/gene_synonym="p54aSAPK"
/db_xref="GeneID:5601"
/db_xref="HGNC:HGNC:6886"
/db_xref="MIM:602896"
CDS 62..1336
/gene="MAPK9"
/gene_synonym="JNK-55"
/gene_synonym="JNK2"
/gene_synonym="JNK2A"
/gene_synonym="JNK2ALPHA"
/gene_synonym="JNK2B"
/gene_synonym="JNK2BETA"
/gene_synonym="p54aSAPK"
/codon_start=1
/product="mitogen-activated protein kinase 9"
/protein_id="AAH32539.1"
/db_xref="GeneID:5601"
/db_xref="HGNC:HGNC:6886"
/db_xref="MIM:602896"
/translation="MSDSKCDSQFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAF
DTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQ
DVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK
SDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEL
VKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMKKLQPTVRNYVENRPKYPGIKFEELFP
DWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYDPAEAEAPP
PQIYDAQLEEREHAIEEWKELIYKEVMDWEERSKNGVVKDQPSDAAVSSNATPSQSSS
INDISSMSTEQTLASDTDSSLDASTGPLEGCR"
BASE COUNT 607 a 384 c 417 g 545 t
ORIGIN
1 ccacgcgtcc ggagggatct gaaacttgcc cacccttcgg gatattgcag gacgctgcat
61 catgagcgac agtaaatgtg acagtcagtt ttatagtgtg caagtggcag actcaacctt
121 cactgtccta aaacgttacc agcagctgaa accaattggc tctggggccc aagggattgt
181 ttgtgctgca tttgatacag ttcttgggat aaatgttgca gtcaagaaac taagccgtcc
241 ttttcagaac caaactcatg caaagagagc ttatcgtgaa cttgtcctct taaaatgtgt
301 caatcataaa aatataatta gtttgttaaa tgtgtttaca ccacaaaaaa ctctagaaga
361 atttcaagat gtgtatttgg ttatggaatt aatggatgct aacttatgtc aggttattca
421 catggagctg gatcatgaaa gaatgtccta ccttctttac cagatgcttt gtggtattaa
481 acatctgcat tcagctggta taattcatag agatttgaag cctagcaaca ttgttgtgaa
541 atcagactgc accctgaaga tccttgactt tggcctggcc cggacagcgt gcactaactt
601 catgatgacc ccttacgtgg tgacacggta ctaccgggcg cccgaagtca tcctgggtat
661 gggctacaaa gagaacgttg atatctggtc agtgggttgc atcatgggag agctggtgaa
721 aggttgtgtg atattccaag gcactgacca tattgatcag tggaataaag ttattgagca
781 gctgggaaca ccatcagcag agttcatgaa gaaacttcag ccaactgtga ggaattatgt
841 cgaaaacaga ccaaagtatc ctggaatcaa atttgaagaa ctctttccag attggatatt
901 cccatcagaa tctgagcgag acaaaataaa aacaagtcaa gccagagatc tgttatcaaa
961 aatgttagtg attgatcctg acaagcggat ctctgtagac gaagctctgc gtcacccata
1021 catcactgtt tggtatgacc ccgccgaagc agaagcccca ccacctcaaa tttatgatgc
1081 ccagttggaa gaaagagaac atgcaattga agaatggaaa gagctaattt acaaagaagt
1141 catggattgg gaagaaagaa gcaagaatgg tgttgtaaaa gatcagcctt cagatgcagc
1201 agtaagtagc aacgccactc cttctcagtc ttcatcgatc aatgacattt catccatgtc
1261 cactgagcag acgctggcct cagacacaga cagcagtctt gatgcctcga cgggacccct
1321 tgaaggctgt cgatgatagg ttagaaatag caaacctgtc agcattgaag gaactctcac
1381 ctccgtgggc ctgaaatgct tgggagttga tggaaccaaa tagaaaaact ccatgttctg
1441 catgtaagaa acacaatgcc ttgccctact cagacctgat aggattgcct gcttagatga
1501 taaaatgagg cagaatatgt ctgaagaaaa aaattgcaag ccacacttct agagattttg
1561 ttcaagatca tttcaggtga gcagttagag taggtgaatt tgtttcaaat tgtactagtg
1621 acagtttctc atcatctgta actgttgaga tgtatgtgca tgtgaccaca aatgcttgct
1681 tggacttgcc catctagcac tttggaaatc agtatttaaa tgccaaataa tcttccaggt
1741 agtgctgctt ctgaagttat ctcttaatcc tcttaagtaa tttggtgtct gtccagaaaa
1801 agtcgattta tgtgtattaa ttggccatca tgatgttatc atatcttatt cccttttatg
1861 ctatgattta ttctatcttt tgtatttcag aagacatata attaaatcta tttaataaat
1921 aaaaatatat agcttttcaa aaaaaaaaaa aaa
//