LOCUS BC032512 2439 bp mRNA linear HUM 27-SEP-2007
DEFINITION Homo sapiens retina and anterior neural fold homeobox 2, mRNA (cDNA
clone MGC:44890 IMAGE:5491469), complete cds.
ACCESSION BC032512
VERSION BC032512.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2439)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2439)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: e Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20127653.
FEATURES Location/Qualifiers
source 1..2439
/db_xref="H-InvDB:HIT000041577"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:44890 IMAGE:5491469"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2439
/gene="RAX2"
/gene_synonym="ARMD6"
/gene_synonym="CORD11"
/gene_synonym="QRX"
/db_xref="GeneID:84839"
/db_xref="HGNC:HGNC:18286"
/db_xref="MIM:610362"
CDS 339..893
/gene="RAX2"
/gene_synonym="ARMD6"
/gene_synonym="CORD11"
/gene_synonym="QRX"
/codon_start=1
/product="retina and anterior neural fold homeobox 2"
/protein_id="AAH32512.1"
/db_xref="GeneID:84839"
/db_xref="HGNC:HGNC:18286"
/db_xref="MIM:610362"
/translation="MFLSPGEGPATEGGGLGPGEEAPKKKHRRNRTTFTTYQLHQLER
AFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWRRQERLESGSGAVAAPRLPE
APALPFARPPAMSLPLEPWLGPGPPAVPGLPRLLGPGPGLQASFGPHAFAPTFADGFA
LEEASLRLLAKEHAQALDRAWPPA"
BASE COUNT 474 a 821 c 766 g 378 t
ORIGIN
1 ccacgcgtcc ggcgccaggc ccgctggggc aggtgtcccg tggaaatcga cggaggggct
61 gccgtgggcg gccgtgacag tcacagagag gggaagagaa aacagggacg gtgacacaca
121 cagagagaag gaagagcaga cagaggcaca gcaggagacc cccccaagcc cgaggaggac
181 agcctgggga tgcagagcac atgccggccc cagtggaggg aaccgatttc cccggagccg
241 ggaggcaagc ctggggctcc cctgccctgt ccctgccggt agccccccca gccgtctccc
301 caccatctgt cccgctgccg tcccaccagg tgggagccat gttcctgagc ccgggcgagg
361 ggccggcaac cgagggtggg ggtctggggc cgggcgagga ggcccccaag aagaagcacc
421 ggaggaaccg caccaccttc accacctacc agctgcacca gctggagcgg gcgttcgagg
481 cctctcacta cccggatgtg tacagccgtg aggagctggc agccaaggtg cacctacctg
541 aggtgcgcgt gcaggtgtgg ttccagaacc gccgggccaa gtggcgccgc caggagcggc
601 tggagtcagg ctcgggtgcc gtggcagctc cgagactccc cgaggcccca gcgctgccgt
661 tcgcccgccc cccggccatg tcgctgcccc tggagccctg gttgggcccc ggaccgccgg
721 ccgtgccagg cctcccccgc ctcctgggcc cgggcccggg gctgcaagcg tccttcgggc
781 ctcatgcctt tgctcccacc ttcgcagatg gcttcgccct ggaggaggcg tccctgcggc
841 tgctggccaa ggaacatgca caggctctgg acagggcctg gccgccagcc tgagcctgcc
901 gccctcccgg gccccctcct cggcccaacc cgagaaccgg ggacgtgccc tggtgacagc
961 caccacgcct tggcctaggc cgaggtcatg gagcaaccgt ggtcaggcca ggccaccacc
1021 actggggagc gggaccagag agacaggctg ctgggttccc tgcccccatc ccgtctccca
1081 ccccatcgcc acccgtcctg ctggcagcgg actggccccc agtgtcaggc aggaggtgac
1141 ccaagtattc tcaggccagg tgcggggacc tcctcccctc ctggggcctc agtctcctgt
1201 ctgttaattg ggcgtggggg cctccgaggt tcgagggctg cgaggctgtg ggtggcggga
1261 ccgctgactc tgtaagatga gtgtaaatct ctctgcttct cctaatcccc atcagcagag
1321 ctgcccactc tccaggctcc cagtcccctg gaaataacaa atagcagcag ctcccgcgag
1381 cctggtctcc tctcaccgtg tgctcgccat gtgagcactc ccctctccgt tgtgccctgg
1441 acctcgggca cagctgtcag cccattctat agagagggaa accggggctt aggcaggaag
1501 ccaggtcccc aaagtcgcac ggccaggagt ggatggagct gcctttcaga cccatcaccg
1561 gtcctaccgt ccggggcaca gcgacaggtt ctggagagag ggtgggtccc gggccaggtg
1621 ctggtgggcc tccaggtgga ggcgggctga tgctgggtgt gtcgtcatcg tcagaccgtt
1681 cctcacgtcc ccacagaccc caggccctgt gcatgtcccc agtggaggca tggccagcat
1741 ctgctctgtc caacccagtc gcatcgccca agagctctga gcaaggaggc tgtcgcgggg
1801 ccgagaaccc gctgggactg gcaagcacgg ctggcccagt gcagcaggag ggggccctga
1861 ggcatgggat gggacagtct gggccagcgc cacctcccgg gacagaagtg cggcaccagg
1921 gcaggagctg cagtagctac cctccccgtc tccagcctgg gctccccaga tcactcccag
1981 atcaccaggt caccccatct ctaggcggca cctcacacac cagtcctgtg gtccaacgcc
2041 ccgccatcac ccaatgtcac cgcacaccag gcagtgggga cacggcagta agcacaagaa
2101 agattttttt tttttaaagc taaaccaggc caggtgcggt ggctcatgcc tgtaatccca
2161 gtgctttggg aggctgaggt gggaggattg cttgagacca gcctgggtga cacagcaaga
2221 ccccatctcc acaaacgttt ttaaaatgtg ccgggtgtac tggtgcacac ctgtcatccc
2281 agctacccaa gaagctgagg caagaggatc acttgagccc agaaggtcga ggctgcaggg
2341 agctgtgatc acactgctgc actccagcct gtgcaacaga gccagaccct gactcaatac
2401 aaataaaaaa caaatctaaa acaaaaaaaa aaaaaaaaa
//