LOCUS BC032498 1640 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens proline/arginine-rich end leucine-rich repeat protein,
mRNA (cDNA clone MGC:45323 IMAGE:5222817), complete cds.
ACCESSION BC032498
VERSION BC032498.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1640)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1640)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: a Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41349452.
FEATURES Location/Qualifiers
source 1..1640
/db_xref="H-InvDB:HIT000041569"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45323 IMAGE:5222817"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1640
/gene="PRELP"
/gene_synonym="MGC45323"
/gene_synonym="MST161"
/gene_synonym="MSTP161"
/gene_synonym="SLRR2A"
/db_xref="GeneID:5549"
/db_xref="HGNC:HGNC:9357"
/db_xref="MIM:601914"
CDS 119..1267
/gene="PRELP"
/gene_synonym="MGC45323"
/gene_synonym="MST161"
/gene_synonym="MSTP161"
/gene_synonym="SLRR2A"
/codon_start=1
/product="proline/arginine-rich end leucine-rich repeat
protein"
/protein_id="AAH32498.1"
/db_xref="GeneID:5549"
/db_xref="HGNC:HGNC:9357"
/db_xref="MIM:601914"
/translation="MRSPLCWLLPLLILASVAQGQPTRRPRPGTGPGRRPRPRPRPTP
SFPQPDEPAEPTDLPPPLPPGPPSIFPDCPRECYCPPDFPSALYCDSRNLRKVPVIPP
RIHYLYLQNNFITELPVESFQNATGLRWINLDNNRIRKIDQRVLEKLPGLVFLYMEKN
QLEEVPSALPRNLEQLRLSQNHISRIPPGVFSKLENLLLLDLQHNRLSDGVFKPDTFH
GLKNLMQLNLAHNILRKMPPRVPTAIHQLYLDSNKIETIPNGYFKSFPNLAFIRLNYN
KLTDRGLPKNSFNISNLLVLHLSHNRISSVPAINNRLEHLYLNNNSIEKINGTQICPN
DLVAFHDFSSDLENVPHLRYLRLDGNYLKPPIPLDLMMCFRLLQSVVI"
BASE COUNT 440 a 539 c 350 g 311 t
ORIGIN
1 cagatcttct agctggctct ctgctgccac agctccgccg aagggagggg gtggaagagg
61 aggactaaac tcagagctga gaggagaggc aggtgtgtgc aggtgcatca cctggatcat
121 gaggtcaccc ctctgctggc tcctcccact tctcatcttg gcctcagtgg cccaaggcca
181 gccaacaaga cgaccaagac ccgggactgg gcccgggcgc agacccaggc ccaggcccag
241 gcccacaccc agctttcctc agcctgatga accagcagag ccaacagacc tgcctcctcc
301 cctccctcca ggccctccat ctatcttccc tgactgtccc cgcgaatgct actgcccccc
361 tgatttccca tctgccctct actgtgatag ccgcaacctg cgaaaggtcc ctgtcatccc
421 gccccgcatc cattacctct atctccagaa caacttcatc actgagctcc cggtggagtc
481 cttccagaat gccacaggcc tgcgatggat taacctggac aacaaccgaa tccgcaagat
541 agaccagagg gtgctggaga aactgcccgg cctggtgttc ctctacatgg agaagaacca
601 gttggaagag gtcccctcgg ccctgccccg gaacctggag cagctgaggc tgagccagaa
661 ccacatctcc agaatcccgc ctggtgtctt cagcaagctg gagaacctgc tgctcctgga
721 tctccagcac aacaggctga gcgacggcgt cttcaagccc gacaccttcc atggcctcaa
781 gaacctcatg cagctcaacc tggcccacaa catcctgaga aagatgccgc ccagggtccc
841 caccgccatt caccagctct acctggacag taacaagatt gagaccatcc ctaacggata
901 cttcaagagc tttcccaatc ttgccttcat tcggcttaac tacaacaagc tgacagacag
961 gggactcccc aagaactcct ttaatatctc caacctgctt gtgctccacc tgtcccacaa
1021 caggatcagc agtgtgcccg ccatcaacaa caggctggaa cacctgtacc tcaacaacaa
1081 tagcatcgag aaaatcaacg gaacccagat ttgccccaac gacctagtgg cgttccatga
1141 cttctcctcg gacctggaga acgtgccaca cctgcgctac ctgcggctgg atggaaacta
1201 cttgaagccg cccatcccgc tggacctcat gatgtgcttc cgcctcctgc agtccgtggt
1261 catctaggcc ctactccgcc accggatctg ctctgaccgc acttgaaggc tggggcccag
1321 gcacctgtgc cggccattcg ttttctctct ctccctttct ttctcccagc tttgcctccc
1381 ttatcccacc ctcgaggcag ggaaaagcca tctattcttc tgcagcctca ggagcgagac
1441 ttcaaggact cagtttggtt ccacccagtt gaaagacacc cagtgcacac ccaaactcct
1501 ggccttctgt ggtttccctt tgctccagaa acacagatgt gtctaaagaa aaaaaaaaaa
1561 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1621 aaaaaaaaaa aaaaaaaaaa
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