LOCUS BC032470 3109 bp mRNA linear HUM 19-MAR-2009
DEFINITION Homo sapiens glycerol kinase 5 (putative), mRNA (cDNA clone
MGC:40579 IMAGE:5217372), complete cds.
ACCESSION BC032470
VERSION BC032470.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3109)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3109)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 64 Row: l Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22749520
The stop codon of the CDS annotated on this record is located > 55
bases upstream of a splice junction, and therefore the mRNA is
predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES Location/Qualifiers
source 1..3109
/db_xref="H-InvDB:HIT000041555"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40579 IMAGE:5217372"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3109
/gene="GK5"
/db_xref="GeneID:256356"
/db_xref="HGNC:HGNC:28635"
CDS 113..1018
/gene="GK5"
/codon_start=1
/product="GK5 protein"
/protein_id="AAH32470.1"
/db_xref="GeneID:256356"
/db_xref="HGNC:HGNC:28635"
/translation="MSGLLTDPEQRAQEPRYPGFVLGLDVGSSVIRCHVYDRAARVCG
SSVQKVENLYPQIGWVEIDPDVLWIQFVAVIKEAVKAAGIQMNQIVGLGISTQRATFI
TWNKKTGNHFHNFISWQDLRAVELVKSWNNSLLMKIFHSSCRVLHFFTRSKRLFTASL
FTFTTQQTSLRLVWILQNLTEVQKAVEEENCCFGTIDTWLLYKLTKGSVYATDFSNAS
TTGLFDPYKMCWSGMITSLISIPLSLLPPVRDTSHNFGSVDEEIFGVPIPIVALLKVP
GYDQNICYIFGKGTIEPVFYHGSTL"
BASE COUNT 850 a 587 c 750 g 922 t
ORIGIN
1 cggctgagcc gggttggggc ccgggttggg ccgcccgggg actctggagc attgggattt
61 gtagcgcgcc ctctgggtag gcggctgtag cggagaggcg tgcgggatcg ggatgtcggg
121 gctgctcacg gacccggagc agagagcgca ggagccgcgg taccccggct tcgtgctggg
181 gctggatgtg ggcagttctg tgatccgctg ccacgtctat gaccgggcgg cgcgggtctg
241 cggctccagc gtgcagaagg tagaaaatct ttatcctcaa attggctggg tagaaattga
301 tcctgatgtt ctttggattc aatttgttgc cgtaataaaa gaagcagtca aagctgcagg
361 aatacagatg aatcaaattg ttggtcttgg catttcaaca cagagagcaa cttttattac
421 gtggaacaag aaaacaggaa atcattttca caactttata agttggcaag acttaagagc
481 tgttgaactt gtaaaatctt ggaataattc tcttcttatg aagatatttc acagttcttg
541 ccgagtgctt cactttttca ctagaagtaa acgacttttt acagccagtt tgttcacttt
601 cacaacccag cagacttctt tgagattggt ctggatttta cagaacttga ctgaggtgca
661 aaaggcagtt gaagaagaaa attgctgctt tgggactatt gatacctggt tgttatataa
721 gctcacaaaa ggttctgtat atgccacaga tttttcaaat gctagtacaa ctggactttt
781 tgacccatat aagatgtgtt ggagtgggat gattacctct ctaatttcga taccactttc
841 tctcctacct cctgtgaggg acacaagcca caattttgga tcagtggatg aagagatatt
901 tggtgtgcct ataccaatag ttgccttgtt aaaggtccct ggatatgacc agaatatctg
961 ctatattttt gggaagggga ccattgagcc agtattctat catggaagta ctttataacc
1021 ttttctgact tgcttgtata ttgtttatca gaaaacttaa attaaaaaaa atttttttta
1081 attctgagtg gtatttagtt tacatttggt actctgagac aaaacacagt gatggggcga
1141 atatttatgt tctgtttgat aatgtgtaac cacaaacagt gttagggcaa cttaaactag
1201 cagagaaagt tgtatgtaca tttaataaag tccttagcca tcatctacca gtaaataagt
1261 ttgtagaata atgaaatatt tgccattttt gatttttttt ttttttttga gacggggtct
1321 cgctctgtca ctcaggctgg agtgcagtgg tataatcatg cctcactgca gcctcggctt
1381 cctgggctca ggtgattctt ccaccccagc ctcccaagta gccggggcca caggtgtgtg
1441 ccacgacacc tggctaattt tttgtatttt tggtagacat gggattttgc tgtgttcccc
1501 tggctgatct cgaactccta gactggggcc ttctgccacc tttgcctccc agggtgctgg
1561 gactgcaggc atgagtcact gtgccaagcc tgtttttgat ttttaagagt cctttcacat
1621 tgcctttgat ttcctgtggc agcttaagca ggaggtagag accacctgtt gcaagatgtg
1681 cagtctccac agtagctggg ggagcagctg agggaaaggg aatttaattt ccaagttaca
1741 aaatcattat catttagaga ggatcggtct tattcaatct aggcataggt gcagggttag
1801 attaaggtat ggctggaaga gttaccaatt agtgacagag ggttctttaa atgagttgtt
1861 gttgttgttg ttgtttttga gatggagttt cactcttgtc tcccagactg gagtgcaatg
1921 gcatgatctc accgatggct cactgtgacc tccgcctctc gggttcaagt gactcttctg
1981 cctcagcctc ctgagtagct gggactatag gttgctgacc agcaatcagc catgtttgga
2041 gagtgctgct tccagacagg tgatgtgaaa ttaaccatgg gaactgggac atttttggat
2101 attaacactg gaaatagcct tcaacagact actggaggct tttatccatt aattgggtgg
2161 aagattgggc aagaagtcgt atgcttagct gaaagcaatg caggagacac tggtactgcc
2221 ataaaatggg ctcagcagtt agggtttttt gttgtttgtt tgtttttgca gaccttttca
2281 cagatgctgc tgagactgaa aaaatggcca aaagtttgga ggattctgaa ggagtttgtt
2341 ttgttccatc ttttagtgga ttacaggctc cattaaatga cccctgggca tgtgcctctt
2401 ttatgggttt gaagccttct accagtaaat accatcttgt acgagcaata ttggagtcaa
2461 tagctttcag aaacaaacag ttatatgaga tgatgaagaa agagattcat attcctgtaa
2521 ggaaaatccg ggcagatgga ggagtttgta agaatggttt tgtcatgcag atgacttcag
2581 acctgattaa tgagaatata gacagacctg ccgacattga catgtcatgc ctgggtgcag
2641 cttctctagc tggccttgct gttgggtttt ggactgacaa ggaggaacta aagaaactga
2701 gacaaagtga agtggttttc aagccacaga agaaatgtca agaatatgaa atgagtctgg
2761 aaaactgggc caaagcagtg aaacgctcca tgaattgggt cttgctgtgt tgcccggggt
2821 agtctttaat tcctggcctc aagtgatcct cccaccttgg cctcccaaag tgctgggatt
2881 gcagccgtga accactgcac ccagccaatg ggtgtaattt cataggaaat aattcttttt
2941 gtcagaatgt actgaattgt aatattaata cctgaaaatt tgttagttca cttcttttcc
3001 acgttcttct ttcccaacat ataaccacaa aataaaggat aaatacttaa aaaaaaaaaa
3061 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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