LOCUS BC032465 2722 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens T-cell, immune regulator 1, ATPase, H+ transporting,
lysosomal V0 subunit A3, mRNA (cDNA clone MGC:40548 IMAGE:5210733),
complete cds.
ACCESSION BC032465
VERSION BC032465.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2722)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2722)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 64 Row: j Column: 6.
FEATURES Location/Qualifiers
source 1..2722
/db_xref="H-InvDB:HIT000041553"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40548 IMAGE:5210733"
/tissue_type="Lung, Spleen, fetal, pooled"
/clone_lib="NIH_MGC_122"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2722
/gene="TCIRG1"
/gene_synonym="a3"
/gene_synonym="Atp6i"
/gene_synonym="ATP6N1C"
/gene_synonym="ATP6V0A3"
/gene_synonym="OC-116kDa"
/gene_synonym="OC116"
/gene_synonym="OPTB1"
/gene_synonym="Stv1"
/gene_synonym="TIRC7"
/gene_synonym="Vph1"
/db_xref="GeneID:10312"
/db_xref="HGNC:HGNC:11647"
/db_xref="MIM:604592"
CDS 102..2594
/gene="TCIRG1"
/gene_synonym="a3"
/gene_synonym="Atp6i"
/gene_synonym="ATP6N1C"
/gene_synonym="ATP6V0A3"
/gene_synonym="OC-116kDa"
/gene_synonym="OC116"
/gene_synonym="OPTB1"
/gene_synonym="Stv1"
/gene_synonym="TIRC7"
/gene_synonym="Vph1"
/codon_start=1
/product="T-cell, immune regulator 1, ATPase, H+
transporting, lysosomal V0 subunit A3"
/protein_id="AAH32465.1"
/db_xref="GeneID:10312"
/db_xref="HGNC:HGNC:11647"
/db_xref="MIM:604592"
/translation="MGSMFRSEEVALVQLFLPTAAAYTCVSRLGELGLVEFRDLNASV
SAFQRRFVVDVRRCEELEKTFTFLQEEVRRAGLVLPPPKGRLPAPPPRDLLRIQEETE
RLAQELRDVRGNQQALRAQLHQLQLHAAVLRQGHEPQLAAAHTDGASERTPLLQAPGG
PHQDLRVNFVAGAVEPHKAPALERLLWRACRGFLIASFRELEQPLEHPVTGEPATWMT
FLISYWGEQIGQKIRKITDCFHCHVFPFLQQEEARLGALQQLQQQSQELQEVLGETER
FLSQVLGRVLQLLPPGQVQVHKMKAVYLALNQCSVSTTHKCLIAEAWCSVRDLPALQE
ALRDSSMEEGVSAVAHRIPCRDMPPTLIRTNRFTASFQGIVDAYGVGRYQEVNPAPYT
IITFPFLFAVMFGDVGHGLLMFLFALAMVLAENRPAVKAAQNEIWQTFFRGRYLLLLM
GLFSIYTGFIYNECFSRATSIFPSGWSVAAMANQSGWSDAFLAQHTMLTLDPNVTGVF
LGPYPFGIDPIWSLAANHLSFLNSFKMKMSVILGVVHMAFGVVLGVFNHVHFGQRHRL
LLETLPELTFLLGLFGYLVFLVIYKWLCVWAARAASAPSILIHFINMFLFSHSPSNRL
LYPRQEVVQATLVVLALAMVPILLLGTPLHLLHRHRRRLRRRPADRQEENKAGLLDLP
DASVNGWSSDEEKAGGLDDEEEAELVPSEVLMHQAIHTIEFCLGCVSNTASYLRLWAL
SLAHAQLSEVLWAMVMRIGLGLGREVGVAAVVLVPIFAAFAVMTVAILLVMEGLSAFL
HALRLHWVEFQNKFYSGTGYKLSPFTFAATDD"
BASE COUNT 483 a 902 c 844 g 493 t
ORIGIN
1 ctagtcccgg gctggcggga gtgcagttct gagtcccgcc cggcgtgcgc ggagcggggc
61 agccagcagc ggaggcgcgg cgcgcagcac acccggggac catgggctcc atgttccgga
121 gcgaggaggt ggccctggtc cagctctttc tgcccacagc ggctgcctac acctgcgtga
181 gtcggctggg cgagctgggc ctcgtggagt tcagagacct caacgcctcg gtgagcgcct
241 tccagagacg ctttgtggtt gatgttcggc gctgtgagga gctggagaag accttcacct
301 tcctgcagga ggaggtgcgg cgggctgggc tggtcctgcc cccgccaaag gggaggctgc
361 cggcaccccc accccgggac ctgctgcgca tccaggagga gacggagcgc ctggcccagg
421 agctgcggga tgtgcggggc aaccagcagg ccctgcgggc ccagctgcac cagctgcagc
481 tccacgccgc cgtgctacgc cagggccatg aacctcagct ggcagccgcc cacacagatg
541 gggcctcaga gaggacgccc ctgctccagg cccccggggg gccgcaccag gacctgaggg
601 tcaactttgt ggcaggtgcc gtggagcccc acaaggcccc tgccctagag cgcctgctct
661 ggagggcctg ccgcggcttc ctcattgcca gcttcaggga gctggagcag ccgctggagc
721 accccgtgac gggcgagcca gccacgtgga tgaccttcct catctcctac tggggtgagc
781 agatcggaca gaagatccgc aagatcacgg actgcttcca ctgccacgtc ttcccgtttc
841 tgcagcagga ggaggcccgc ctcggggccc tgcagcagct gcaacagcag agccaggagc
901 tgcaggaggt cctcggggag acagagcggt tcctgagcca ggtgctaggc cgggtgctgc
961 agctgctgcc gccagggcag gtgcaggtcc acaagatgaa ggccgtgtac ctggccctga
1021 accagtgcag cgtgagcacc acgcacaagt gcctcattgc cgaggcctgg tgctctgtgc
1081 gagacctgcc cgccctgcag gaggccctgc gggacagctc gatggaggag ggagtgagtg
1141 ccgtggctca ccgcatcccc tgccgggaca tgccccccac actcatccgc accaaccgct
1201 tcacggccag cttccagggc atcgtggatg cctacggcgt gggccgctac caggaggtca
1261 accccgctcc ctacaccatc atcaccttcc ccttcctgtt tgctgtgatg ttcggggatg
1321 tgggccacgg gctgctcatg ttcctcttcg ccctggccat ggtccttgcg gagaaccgac
1381 cggctgtgaa ggccgcgcag aacgagatct ggcagacttt cttcaggggc cgctacctgc
1441 tcctgcttat gggcctgttc tccatctaca ccggcttcat ctacaacgag tgcttcagtc
1501 gcgccaccag catcttcccc tcgggctgga gtgtggccgc catggccaac cagtctggct
1561 ggagtgatgc attcctggcc cagcacacga tgcttaccct ggatcccaac gtcaccggtg
1621 tcttcctggg accctacccc tttggcatcg atcctatttg gagcctggct gccaaccact
1681 tgagcttcct caactccttc aagatgaaga tgtccgtcat cctgggcgtc gtgcacatgg
1741 cctttggggt ggtcctcgga gtcttcaacc acgtgcactt tggccagagg caccggctgc
1801 tgctggagac gctgccggag ctcaccttcc tgctgggact cttcggttac ctcgtgttcc
1861 tagtcatcta caagtggctg tgtgtctggg ctgccagggc cgcctcggcc cccagcatcc
1921 tcatccactt catcaacatg ttcctcttct cccacagccc cagcaacagg ctgctctacc
1981 cccggcagga ggtggtccag gccacgctgg tggtcctggc cttggccatg gtgcccatcc
2041 tgctgcttgg cacacccctg cacctgctgc accgccaccg ccgccgcctg cggaggaggc
2101 ccgctgaccg acaggaggaa aacaaggccg ggttgctgga cctgcctgac gcatctgtga
2161 atggctggag ctccgatgag gaaaaggcag ggggcctgga tgatgaagag gaggccgagc
2221 tcgtcccctc cgaggtgctc atgcaccagg ccatccacac catcgagttc tgcctgggct
2281 gcgtctccaa caccgcctcc tacctgcgcc tgtgggccct gagcctggcc cacgcccagc
2341 tgtccgaggt tctgtgggcc atggtgatgc gcataggcct gggcctgggc cgggaggtgg
2401 gcgtggcggc tgtggtgctg gtccccatct ttgccgcctt tgccgtgatg accgtggcta
2461 tcctgctggt gatggaggga ctctcagcct tcctgcacgc cctgcggctg cactgggtgg
2521 aattccagaa caagttctac tcaggcacgg gctacaagct gagtcccttc accttcgctg
2581 ccacagatga ctagggccca ctgcaggtcc tgccagacct ccttcctgac ctctgaggca
2641 ggagaggaat aaagacggtc cgccctggca aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2701 aaaaaaaaaa aaaaaaaaaa aa
//