LOCUS BC032339 1547 bp mRNA linear HUM 29-OCT-2007
DEFINITION Homo sapiens canopy 4 homolog (zebrafish), mRNA (cDNA clone
MGC:40499 IMAGE:5191897), complete cds.
ACCESSION BC032339
VERSION BC032339.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1547)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1547)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 64 Row: g Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22749478.
FEATURES Location/Qualifiers
source 1..1547
/db_xref="H-InvDB:HIT000041498"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40499 IMAGE:5191897"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1547
/gene="CNPY4"
/gene_synonym="PRAT4B"
/db_xref="GeneID:245812"
/db_xref="HGNC:HGNC:28631"
/db_xref="MIM:610047"
CDS 104..850
/gene="CNPY4"
/gene_synonym="PRAT4B"
/codon_start=1
/product="canopy 4 homolog (zebrafish)"
/protein_id="AAH32339.1"
/db_xref="GeneID:245812"
/db_xref="HGNC:HGNC:28631"
/db_xref="MIM:610047"
/translation="MGPVRLGILLFLFLAVHEAWAGMLKEEDDDTERLPSKCEVCKLL
STELQAELSRTGRSREVLELGQVLDTGKRKRHVPYSVSETRLEEALENLCERILDYSV
HAERKGSLRYAKGQSQTMATLKGLVQKGVKVDLGIPLELWDEPSVEVTYLKKQCETML
EEFEDIVGDWYFHHQEQPLQNFLCEGHVLPAAETACLQETWTGKEITDGEEKTEGEEE
QEEEEEEEEEEGGDKMTKTGSHPKLDREDL"
BASE COUNT 454 a 319 c 437 g 337 t
ORIGIN
1 gctggattta aggttgccgc tagccgcctg ggaatttaag ggacccacac taccttcccg
61 aagttgaagg caagcggtga ttgtttgtag acggcgcttt gtcatgggac ctgtgcggtt
121 gggaatattg cttttccttt ttttggccgt gcacgaggct tgggctggga tgttgaagga
181 ggaggacgat gacacagaac gcttgcccag caaatgcgaa gtgtgtaagc tgctgagcac
241 agagctacag gcggaactga gtcgcaccgg tcgatctcga gaggtgctgg agctggggca
301 ggtgctggat acaggcaaga ggaagagaca cgtgccttac agcgtttcag agacaaggct
361 ggaagaggcc ttagagaatt tatgtgagcg gatcctggac tatagtgttc acgctgagcg
421 caagggctca ctgagatatg ccaagggtca gagtcagacc atggcaacac tgaaaggcct
481 agtgcagaag ggggtgaagg tggatctggg gatccctctg gagctttggg atgagcccag
541 cgtggaggtc acatacctca agaagcagtg tgagaccatg ttggaggagt ttgaagacat
601 tgtgggagac tggtacttcc accatcagga gcagccccta caaaattttc tctgtgaagg
661 tcatgtgctc ccagctgctg aaactgcatg tctacaggaa acttggactg gaaaggagat
721 cacagatggg gaagagaaaa cagaagggga ggaagagcag gaggaggagg aggaagagga
781 ggaagaggaa gggggagaca agatgaccaa gacaggaagc caccccaaac ttgaccgaga
841 agatctttga cccttgcctt tgagccccca ggaggggaag ggatcatgga gagccctcta
901 aagcctgcac tctccctgct ccacagcttt cagggtgtgt ttatgagtga ctccacccaa
961 gcttgtagct gttctctccc atctaacctc aggcaagatc ctggtgaaac agcatgacat
1021 ggcttctggg gtggagggtg ggggtggagg tcctgctcct agagatgaac tctatccagc
1081 cccttaattg gcaggtgtat gtgctgacag tactgaaagc tttcctcttt aactgatccc
1141 acccccaccc aaaagtcagc agtggcactg gagctgtggg ctttggggaa gtcacttagc
1201 tccttaaggt ctgtttttag acccttccaa ggaagaggcc agaacggaca ttctctgcga
1261 tctatataca ttgcctgtat ccaggaggct acacaccagc aaaccgtgaa ggagaatggg
1321 acactgggtc atggcctgga gttgctgata atttaggtgg gatagatact tggtctactt
1381 aagctcaatg taacccagag cccaccatat agttttatag gtgctcaatt ttctatatcg
1441 ctattaaact tttttctttt tttctaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1501 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//