LOCUS BC032304 2533 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RAD17 homolog (S. pombe), mRNA (cDNA clone MGC:40346
IMAGE:5170876), complete cds.
ACCESSION BC032304
VERSION BC032304.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2533)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2533)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 64 Row: e Column: 23.
FEATURES Location/Qualifiers
source 1..2533
/db_xref="H-InvDB:HIT000041475_03"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40346 IMAGE:5170876"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2533
/gene="RAD17"
/gene_synonym="CCYC"
/gene_synonym="HRAD17"
/gene_synonym="R24L"
/gene_synonym="RAD17Sp"
/gene_synonym="Rad24"
/db_xref="GeneID:5884"
/db_xref="HGNC:HGNC:9807"
/db_xref="MIM:603139"
CDS 109..2121
/gene="RAD17"
/gene_synonym="CCYC"
/gene_synonym="HRAD17"
/gene_synonym="R24L"
/gene_synonym="RAD17Sp"
/gene_synonym="Rad24"
/codon_start=1
/product="RAD17 homolog (S. pombe)"
/protein_id="AAH32304.1"
/db_xref="GeneID:5884"
/db_xref="HGNC:HGNC:9807"
/db_xref="MIM:603139"
/translation="MNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPST
LESSRFPARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEV
ETWLKAQVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQK
DDFKGMFNTESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLP
NQFYRDSHTLHEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISF
NPVAPTIMMKFLNRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSS
KGENNLRPRKKGMSLKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKI
LYCKRASLTELDSPRLPSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFF
MEIDDIVRASEFLSFADILSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGS
SFRPLHKPQWFLINKKYRENCLAAKALFPDFCLPALCRQTQLLPYLALLTIPMRNQAQ
ISFIQDIGRLPLKRHFGRLKMEALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQA
TVPETWSLPLSQNSASELPASQPQPFSAQGDMEENIIIEDYESDGT"
BASE COUNT 954 a 431 c 474 g 674 t
ORIGIN
1 ttgctgtcga aagttttact ataatgaaag atattttcat actctcaaaa atatagagga
61 aaggggccaa gattatagta ccagtcacaa tcttttgatg aggacgaaat gaatcaggta
121 acagactggg ttgacccatc atttgatgat tttctagagt gtagtggcgt ctctactatt
181 actgccacat cattaggtgt gaataactca agtcatagaa gaaaaaatgg gccttctaca
241 ttagaaagca gcagatttcc agcgagaaaa agaggaaatc tatcttcctt agaacagatt
301 tatggtttag aaaattcaaa agaatatctg tctgaaaatg aaccatgggt ggataaatat
361 aaaccagaaa ctcagcatga acttgctgtg cataaaaaga aaattgaaga agtcgaaacc
421 tggttaaaag ctcaagtttt agaaaggcaa ccaaaacagg gtggatctat tttattaata
481 acaggtcctc ctggatgtgg aaagacaacg accttaaaaa tactatcaaa ggagcatggt
541 attcaagtac aagagtggat taatccagtt ttaccagact tccaaaaaga tgatttcaag
601 gggatgttta atactgaatc aagcttccat atgtttccct atcagtctca gatagcagtt
661 ttcaaagagt ttctactaag agcgacaaag tataacaagt tacaaatgct tggagatgat
721 ctgagaactg ataagaagat aattctggtt gaagatttac ctaaccagtt ttatcgggat
781 tctcatactt tacatgaagt tctaaggaag tatgtgagga ttggtcgatg tcctcttata
841 tttataatct cggacagtct cagtggagat aataatcaaa ggttattgtt tcccaaagaa
901 attcaggaag agtgttctat ctcaaatatt agtttcaacc ctgtggcacc aacaattatg
961 atgaaatttc ttaatcgaat agtgactata gaagctaaca agaatggagg aaaaattact
1021 gtccctgaca aaacttctct agagttgctc tgtcagggat gttctggtga tatcagaagt
1081 gcaataaaca gcctccagtt ttcttcttca aaaggagaaa acaacttacg gccaaggaaa
1141 aaaggaatgt ctttaaaatc agatgctgtg ctgtcaaaat caaaacgaag aaaaaaacct
1201 gatagggttt ttgaaaatca agaggtccaa gctattggtg gcaaagatgt ttctctgttt
1261 ctcttcagag ctttggggaa aattctatat tgtaaaagag catctttaac agaattagac
1321 tcacctcggt tgccctctca tttatcagaa tatgaacggg atacattact tgttgaacct
1381 gaggaggtag tagaaatgtc acacatgcct ggagacttat ttaatttata tcttcaccaa
1441 aactacatag atttcttcat ggaaattgat gatattgtga gagccagtga atttctgagt
1501 tttgcagata tcctcagtgg tgactggaat acacgctctt tactcaggga atatagcaca
1561 tctatagcta cgagaggtgt gatgcattcc aacaaagccc gaggatatgc tcattgccaa
1621 ggaggaggat caagttttcg acccttgcac aaacctcagt ggtttctaat aaataaaaag
1681 tatcgggaaa attgcctggc agcaaaagca ctttttcctg acttctgcct accagcttta
1741 tgccgccaaa ctcagctatt gccatacctt gctctactaa ccattccaat gagaaatcaa
1801 gctcagattt cttttatcca agatattgga aggctccctc tgaagcgaca ctttggaaga
1861 ttgaaaatgg aagccctgac tgacagggaa catggaatga tagaccctga cagcggagat
1921 gaagcccagc ttaatggagg acattctgca gaggaatctc tgggtgaacc cactcaagcc
1981 actgtgccgg aaacctggtc tcttcctttg agtcagaata gtgccagtga actgcctgct
2041 agccagcccc agcccttttc agcccaagga gacatggaag aaaacataat aatagaagac
2101 tacgagagtg atgggacata gaagccagcc tgctaatcag attgctactt cacagcttca
2161 tttttgtttc attcagtggt acttcagcag agttaatatg cttttctgat gaattacaca
2221 acagtttgtt aattcttcat tcttgtagta tttcatcaca agaaacctac tcttctgtca
2281 tcttgaagta aatagaagat caagccttca aatctcttaa ttttttcggt atttattaaa
2341 tctgtgagtg gtttaaggaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2401 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2461 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2521 aaaaaaaaaa aaa
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