LOCUS BC032226 3236 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens phosphodiesterase 1B, calmodulin-dependent, mRNA (cDNA
clone MGC:34576 IMAGE:5200139), complete cds.
ACCESSION BC032226
VERSION BC032226.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3236)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3236)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 49 Row: b Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24431942.
FEATURES Location/Qualifiers
source 1..3236
/db_xref="H-InvDB:HIT000041453"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34576 IMAGE:5200139"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3236
/gene="PDE1B"
/gene_synonym="PDE1B1"
/db_xref="GeneID:5153"
/db_xref="HGNC:HGNC:8775"
/db_xref="MIM:171891"
CDS 167..1777
/gene="PDE1B"
/gene_synonym="PDE1B1"
/codon_start=1
/product="phosphodiesterase 1B, calmodulin-dependent"
/protein_id="AAH32226.1"
/db_xref="GeneID:5153"
/db_xref="HGNC:HGNC:8775"
/db_xref="MIM:171891"
/translation="MELSPRSPPEMLEESDCPSPLELKSAPSKKMWIKLRSLLRYMVK
QLENGEINIEELKKNLEYTASLLEAVYIDETRQILDTEDELQELRSDAVPSEVRDWLA
STFTQQARAKGRRAEEKPKFRSIVHAVQAGIFVERMFRRTYTSVGPTYSTAVLNCLKN
LDLWCFDVFSLNQAADDHALRTIVFELLTRHNLISRFKIPTVFLMSFLDALETGYGKY
KNPYHNQIHAADVTQTVHCFLLRTGMVHCLSEIELLAIIFAAAIHDYEHTGTTNSFHI
QTKSECAIVYNDRSVLENHHISSVFRLMQDDEMNIFINLTKDEFVELRALVIEMVLAT
DMSCHFQQVKTMKTALQQLERIDKPKALSLLLHAADISHPTKQWLVHSRWTKALMEEF
FRQGDKEAELGLPFSPLCDRTSTLVAQSQIGFIDFIVEPTFSVLTDVAEKSVQPLADE
DSKSKNQPSFQWRQPSLDVEVGDPNPDVVSFRSTWVKRIQENKQKWKERAASGITNQM
SIDELSPCEEEAPPSPAEDEHNQNGNLD"
BASE COUNT 745 a 920 c 887 g 684 t
ORIGIN
1 ggtagcggca gcagcagcgg cggtgcggag agcttggact gggagcccaa agctcggctg
61 ggcagcggga gaggaggagc cgcaggagct gcagctctgc cagcttgggc cgagcctaga
121 gacaccggcc tggctggtcc acgccagccg cagaccgtgg ctgagcatgg agctgtcccc
181 ccgcagtcct ccggagatgc tggaggagtc ggattgcccg tcacccctgg agctgaagtc
241 agcccccagc aagaagatgt ggattaagct tcggtctctg ctgcgctaca tggtgaagca
301 gttggagaat ggggagataa acattgagga gctgaagaaa aatctggagt acacagcttc
361 tctgctggaa gccgtctaca tagatgagac acggcaaatc ttggacacgg aggacgagct
421 gcaggagctg cggtcagatg ccgtgccttc ggaggtgcgg gactggctgg cctccacctt
481 cacccagcag gcccgggcca aaggccgccg agcagaggag aagcccaagt tccgaagcat
541 tgtgcacgct gtgcaggctg ggatcttcgt ggaacggatg ttccggagaa catacacctc
601 tgtgggcccc acttactcta ctgcggttct caactgtctc aagaacctgg atctctggtg
661 ctttgatgtc ttttccttga accaggcagc agatgaccat gccctgagga ccattgtttt
721 tgagttgctg actcggcata acctcatcag ccgcttcaag attcccactg tgtttttgat
781 gagtttcctg gatgccttgg agacaggcta tgggaagtac aagaatcctt accacaacca
841 gatccacgca gccgatgtta cccagacagt ccattgcttc ttgctccgca cagggatggt
901 gcactgcctg tcggagattg agctcctggc catcatcttt gctgcagcta tccatgatta
961 tgagcacacg ggcactacca acagcttcca catccagacc aagtcagaat gtgccatcgt
1021 gtacaatgat cgttcagtgc tggagaatca ccacatcagc tctgttttcc gattgatgca
1081 ggatgatgag atgaacattt tcatcaacct caccaaggat gagtttgtag aactccgagc
1141 cctggtcatt gagatggtgt tggccacaga catgtcctgc catttccagc aagtgaagac
1201 catgaagaca gccttgcaac agctggagag gattgacaag cccaaggccc tgtctctact
1261 gctccatgct gctgacatca gccacccaac caagcagtgg ttggtccaca gccgttggac
1321 caaggccctc atggaggaat tcttccgtca gggtgacaag gaggcagagt tgggcctgcc
1381 cttttctcca ctctgtgacc gcacttccac tctagtggca cagtctcaga tagggttcat
1441 cgacttcatt gtggagccca cattctctgt gctgactgac gtggcagaga agagtgttca
1501 gcccctggcg gatgaggact ccaagtctaa aaaccagccc agctttcagt ggcgccagcc
1561 ctctctggat gtggaagtgg gagaccccaa ccctgatgtg gtcagctttc gttccacctg
1621 ggtcaagcgc attcaggaga ataagcagaa atggaaggaa cgggcagcaa gtggcatcac
1681 caaccagatg tccattgacg agctgtcccc ctgtgaagaa gaggcccccc catcccctgc
1741 cgaagatgaa cacaaccaga atgggaatct ggattagccc tggggctggc ccaggtcttc
1801 attgagtcca aagtgtttga tgtcatcagc accatccatc aggactggct cccccatctg
1861 ctccaaggga gcgtggtcgt ggaagaaaca acccacctga aggccaaatg ccagagattt
1921 ggggttgggg aaagggcccc tccccacctg acacccactg gggtgcactt taatgttccg
1981 gcagcaagac tggggaactt caggctccca gtggtcactg tgcccatccc tcagcctctg
2041 gattctcttc atggccaggt ggctgccagg gagcggggag cttcctggag gcttcccagg
2101 gccttgggga agggtcagag atgccagccc cctgggacct cccccatcct ttttgcctcc
2161 aagtttctaa gcaatacatt ttgggggttc cctcagcccc ccaccccaga tcttagctgg
2221 caggtctggg tgcccctttt cctcccctgg gaagggctgg aataggatag aaagctgggg
2281 gttttcagag ccctatgtgt ggggagggga gtggattcct tcagggcatg gtacctttct
2341 aggatctggg aatggggtgg agaggacatc ctcttcaccc cagaattgcg ctgcttcagc
2401 cccatctcca gcctgatcct ctgaatcttc cttccctccc tttctgatac agtgactggg
2461 gcaaaaggag ccattgtgac caggggctgc gggaggcctt tcctgggacc ttccttggga
2521 ctggtctggg cccctggggc ttgtcgcctg ccctgagtcc ggagcccttt gcctccttcc
2581 tctcccctgg ggctgggagg ctccatccga ccaatgtctg taaagtgctt tgaggatctc
2641 cccagcaaag caccttcaga atgtatcgac accagctggg ttagggtcaa gggtgcctgg
2701 ggagggtgag taatcctgca ttgctaaaag agagggtctg tcccctcctc tccacgtccc
2761 agaactggcc cagctgcagg cactaagaag ctcctcccct gagacaagtg aggggtagtc
2821 ggtgaaaggc agatggacaa ggggctcagg gctgctgcct tcctgtcctc tggagagaac
2881 ccagccaggc gcggtgcccc ttcctctcct caggctcctc cttgccccca ccttgcccca
2941 ggaaaggcca aagtccaggt gactgccctc cttctttctt gtaaatacca accatgcatt
3001 tgtacagtgg gccctgttca tgcgaaatcc acatccatgg tctcctagac ctgctaccct
3061 ggtacttcca ccctacccca ccccgagaag ggcagagacg catgtgactc acccctgccc
3121 ttggtttccc agacccctgc tatagccaga gaacaataaa gaagggagac caggaaaaaa
3181 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//