LOCUS BC032138 897 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens peptidylprolyl isomerase B (cyclophilin B), mRNA (cDNA
clone MGC:29698 IMAGE:4896656), complete cds.
ACCESSION BC032138
VERSION BC032138.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 897)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 897)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC032138.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: j Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 44890060.
FEATURES Location/Qualifiers
source 1..897
/db_xref="H-InvDB:HIT000041441"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29698 IMAGE:4896656"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..897
/gene="PPIB"
/gene_synonym="CYP-S1"
/gene_synonym="CYPB"
/gene_synonym="MGC14109"
/gene_synonym="MGC2224"
/gene_synonym="SCYLP"
/db_xref="GeneID:5479"
/db_xref="HGNC:HGNC:9255"
/db_xref="MIM:123841"
CDS 24..674
/gene="PPIB"
/gene_synonym="CYP-S1"
/gene_synonym="CYPB"
/gene_synonym="MGC14109"
/gene_synonym="MGC2224"
/gene_synonym="SCYLP"
/codon_start=1
/product="peptidylprolyl isomerase B (cyclophilin B)"
/protein_id="AAH32138.1"
/db_xref="GeneID:5479"
/db_xref="HGNC:HGNC:9255"
/db_xref="MIM:123841"
/translation="MLRLSERNMKVLLAAALIAGSVFFLLLPGPSAADEKKKGPKVTV
KVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMI
QGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTA
WLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKDVIIADCGKIEVEKPFAIAKE"
BASE COUNT 236 a 224 c 249 g 188 t
ORIGIN
1 gctgctttcg cctccgcctg tggatgctgc gcctctccga acgcaacatg aaggtgctcc
61 ttgccgccgc cctcatcgcg gggtccgtct tcttcctgct gctgccggga ccttctgcgg
121 ccgatgagaa gaagaagggg cccaaagtca ccgtcaaggt gtattttgac ctacgaattg
181 gagatgaaga tgtaggccgg gtgatctttg gtctcttcgg aaagactgtt ccaaaaacag
241 tggataattt tgtggcctta gctacaggag agaaaggatt tggctacaaa aacagcaaat
301 tccatcgtgt aatcaaggac ttcatgatcc agggcggaga cttcaccagg ggagatggca
361 caggaggaaa gagcatctac ggtgagcgct tccccgatga gaacttcaaa ctgaagcact
421 acgggcctgg ctgggtgagc atggccaacg caggcaaaga caccaacggc tcccagttct
481 tcatcacgac agtcaagaca gcctggctag atggcaagca tgtggtgttt ggcaaagttc
541 tagagggcat ggaggtggtg cggaaggtgg agagcaccaa gacagacagc cgggataaac
601 ccctgaagga tgtgatcatc gcagactgcg gcaagatcga ggtggagaag ccctttgcca
661 tcgccaagga gtagggcaca gggacatctt tctttgagtg accgtctgtg caggccctgt
721 agtccgccac agggctctga gctgcactgg ccccggtgct ggcatctggt ggagcggacc
781 cactcccctc acattccaca ggcccatgga ctcacttttg taacaaactc ctaccaacac
841 tgaccaataa aaaaaaatgt gggttttttt ttttttaaaa aaaaaaaaaa aaaaaaa
//