LOCUS BC032116 2276 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens desmin, mRNA (cDNA clone MGC:29582 IMAGE:4905678),
complete cds.
ACCESSION BC032116
VERSION BC032116.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2276)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2276)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC032116.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: k Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55749931.
FEATURES Location/Qualifiers
source 1..2276
/db_xref="H-InvDB:HIT000041427"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29582 IMAGE:4905678"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2276
/gene="DES"
/gene_synonym="CMD1I"
/gene_synonym="CSM1"
/gene_synonym="CSM2"
/gene_synonym="FLJ12025"
/db_xref="GeneID:1674"
/db_xref="HGNC:HGNC:2770"
/db_xref="MIM:125660"
CDS 99..1511
/gene="DES"
/gene_synonym="CMD1I"
/gene_synonym="CSM1"
/gene_synonym="CSM2"
/gene_synonym="FLJ12025"
/codon_start=1
/product="desmin"
/protein_id="AAH32116.1"
/db_xref="GeneID:1674"
/db_xref="HGNC:HGNC:2770"
/db_xref="MIM:125660"
/translation="MSQAYSSSQRVSSYRRTFGGAPGFPLGSPLSSPVFPRAGFGSKG
SSSSVTSRVYQVSRTSGGAGGLGSLRASRLGTTRTPSSYGAGELLDFSLADAVNQEFL
TTRTNEKVELQELNDRFANYIEKVRFLEQQNAALAAEVNRLKGREPTRVAELYEEELR
ELRRQVEVLTNQRARVDVERDNLLDDLQRLKAKLQEEIQLKEEAENNLAAFRADVDAA
TLARIDLERRIESLNEEIAFLKKVHEEEIRELQAQLQEQQVQVEMDMSKPDLTAALRD
IRAQYETIAAKNISEAEEWYKSKVSDLTQAANKNNDALRQAKQEMMEYRHQIQSYTCE
IDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKDEMARHLREYQDLL
NVKMALDVEIATYRKLLEGEESRINLPIQTYSALNFRETSPEQRGSEVHTKKTVMIKT
IETRDGEVVSEATQQQHEVL"
BASE COUNT 500 a 715 c 701 g 360 t
ORIGIN
1 gagagagaac tagtctcccc tcgccgcatc cactctccgg ccggccgcct gcccgccgcc
61 tcctccgtgc gcccgccagc ctcgcccgcg ccgtcaccat gagccaggcc tactcgtcca
121 gccagcgcgt gtcctcctac cgccgcacct tcggcggggc cccgggcttc ccgctcggct
181 ccccgctgag ctcgcccgtg ttcccgcggg cgggtttcgg ctctaagggc tcctccagct
241 cggtgacgtc ccgcgtgtac caggtgtcgc gcacgtcggg cggggccggg ggcctggggt
301 cgctgcgggc cagccggctg gggaccaccc gcacgccctc ctcctacggc gcaggcgagc
361 tgctggactt ctcactggcc gacgcggtga accaggagtt tctgaccacg cgcaccaacg
421 agaaggtgga gctgcaggag ctcaatgacc gcttcgccaa ctacatcgag aaggtgcgct
481 tcctggagca gcagaacgcg gcgctcgccg ccgaagtgaa ccggctcaag ggccgcgagc
541 cgacgcgagt ggccgagctc tacgaggagg agctgcggga gctgcggcgc caggtggagg
601 tgctcactaa ccagcgcgcg cgcgtcgacg tcgagcgcga caacctgctc gacgacctgc
661 agcggctcaa ggccaagctg caggaggaga ttcagttgaa ggaagaagca gagaacaatt
721 tggctgcctt ccgagcggac gtggatgcag ctactctagc tcgcattgac ctggagcgca
781 gaattgaatc tctcaacgag gagatcgcgt tccttaagaa agtgcatgaa gaggagatcc
841 gtgagttgca ggctcagctt caggaacagc aggtccaggt ggagatggac atgtctaagc
901 cagacctcac tgccgccctc agggatatcc gggctcagta tgagaccatc gcggctaaga
961 acatttctga agctgaggag tggtacaagt cgaaggtgtc agacctgacc caggcagcca
1021 acaagaacaa cgacgccctg cgccaggcca agcaggagat gatggaatac cgacaccaga
1081 tccagtccta cacctgcgag attgacgccc tcaagggcac taacgattcc ctgatgaggc
1141 agatgcggga attggaggac cgatttgcca gtgaggccag tggctaccag gacaacattg
1201 cacgcctgga ggaggaaatc cggcacctca aggatgagat ggcccgccat ctgcgcgagt
1261 accaggacct gctcaacgtg aagatggccc tggatgtgga gattgccacc taccggaagc
1321 tgctggaggg agaggagagc cggatcaatc tccccatcca gacctactct gccctcaatt
1381 tccgagaaac cagccctgag caaaggggtt ctgaggtcca taccaagaag acggtgatga
1441 tcaagaccat cgagacacgg gatggggagg tcgtcagtga ggccacacag cagcagcatg
1501 aagtgctcta aagacagaga ccctctgcca ccagagaccg tcctcacccc tgtcctcact
1561 gctccctgaa gccagccttc ttccatccca ggacaccaca cccagcctca gtcctcccct
1621 cacagcctct gacccctcct cactggccat ccctcgtggt ccccaacagc gacatagccc
1681 atccctgcct ggtcacaggg catgccccgg ccacctctgc ggaccccagc tgtgagcctt
1741 ggctgttggc agtgagtgag cctggctctt gtgctggatg gagcccaggc gggagcggtg
1801 gccctgtccc tcccacctct gtgacctcag gcactagcct ttggctctgg agacagcccc
1861 agagcagggt gttgggatac tgcagggcca ggactgagcc ccgcagacct ccccagcccc
1921 tagcccagga gagagaaagc caggcaggta gccaggggga ctagcccctg tggagactgg
1981 ggggcttgaa attgtccccg tggtctctta ctttcctttc cccagcccag ggtggactta
2041 gaaagcaggg gctacaagag ggaatccccg aaggtgctgg aggtgggagc aggagattga
2101 gaaggagaga aagtgggtga gatgctggag aagagaggag aggagagagg cagagagcgg
2161 tctcaggctg gtgggagggg cgcccacctc cccacgccct cccctcccct gctgcagggg
2221 ctctggagag aaacaataaa gagattcaca cacaagcaaa aaaaaaaaaa aaaaaa
//