LOCUS BC032116 2276 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens desmin, mRNA (cDNA clone MGC:29582 IMAGE:4905678), complete cds. ACCESSION BC032116 VERSION BC032116.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2276) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2276) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC032116.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 39 Row: k Column: 13 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 55749931. FEATURES Location/Qualifiers source 1..2276 /db_xref="H-InvDB:HIT000041427" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:29582 IMAGE:4905678" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2276 /gene="DES" /gene_synonym="CMD1I" /gene_synonym="CSM1" /gene_synonym="CSM2" /gene_synonym="FLJ12025" /db_xref="GeneID:1674" /db_xref="HGNC:HGNC:2770" /db_xref="MIM:125660" CDS 99..1511 /gene="DES" /gene_synonym="CMD1I" /gene_synonym="CSM1" /gene_synonym="CSM2" /gene_synonym="FLJ12025" /codon_start=1 /product="desmin" /protein_id="AAH32116.1" /db_xref="GeneID:1674" /db_xref="HGNC:HGNC:2770" /db_xref="MIM:125660" /translation="MSQAYSSSQRVSSYRRTFGGAPGFPLGSPLSSPVFPRAGFGSKG SSSSVTSRVYQVSRTSGGAGGLGSLRASRLGTTRTPSSYGAGELLDFSLADAVNQEFL TTRTNEKVELQELNDRFANYIEKVRFLEQQNAALAAEVNRLKGREPTRVAELYEEELR ELRRQVEVLTNQRARVDVERDNLLDDLQRLKAKLQEEIQLKEEAENNLAAFRADVDAA TLARIDLERRIESLNEEIAFLKKVHEEEIRELQAQLQEQQVQVEMDMSKPDLTAALRD IRAQYETIAAKNISEAEEWYKSKVSDLTQAANKNNDALRQAKQEMMEYRHQIQSYTCE IDALKGTNDSLMRQMRELEDRFASEASGYQDNIARLEEEIRHLKDEMARHLREYQDLL NVKMALDVEIATYRKLLEGEESRINLPIQTYSALNFRETSPEQRGSEVHTKKTVMIKT IETRDGEVVSEATQQQHEVL" BASE COUNT 500 a 715 c 701 g 360 t ORIGIN 1 gagagagaac tagtctcccc tcgccgcatc cactctccgg ccggccgcct gcccgccgcc 61 tcctccgtgc gcccgccagc ctcgcccgcg ccgtcaccat gagccaggcc tactcgtcca 121 gccagcgcgt gtcctcctac cgccgcacct tcggcggggc cccgggcttc ccgctcggct 181 ccccgctgag ctcgcccgtg ttcccgcggg cgggtttcgg ctctaagggc tcctccagct 241 cggtgacgtc ccgcgtgtac caggtgtcgc gcacgtcggg cggggccggg ggcctggggt 301 cgctgcgggc cagccggctg gggaccaccc gcacgccctc ctcctacggc gcaggcgagc 361 tgctggactt ctcactggcc gacgcggtga accaggagtt tctgaccacg cgcaccaacg 421 agaaggtgga gctgcaggag ctcaatgacc gcttcgccaa ctacatcgag aaggtgcgct 481 tcctggagca gcagaacgcg gcgctcgccg ccgaagtgaa ccggctcaag ggccgcgagc 541 cgacgcgagt ggccgagctc tacgaggagg agctgcggga gctgcggcgc caggtggagg 601 tgctcactaa ccagcgcgcg cgcgtcgacg tcgagcgcga caacctgctc gacgacctgc 661 agcggctcaa ggccaagctg caggaggaga ttcagttgaa ggaagaagca gagaacaatt 721 tggctgcctt ccgagcggac gtggatgcag ctactctagc tcgcattgac ctggagcgca 781 gaattgaatc tctcaacgag gagatcgcgt tccttaagaa agtgcatgaa gaggagatcc 841 gtgagttgca ggctcagctt caggaacagc aggtccaggt ggagatggac atgtctaagc 901 cagacctcac tgccgccctc agggatatcc gggctcagta tgagaccatc gcggctaaga 961 acatttctga agctgaggag tggtacaagt cgaaggtgtc agacctgacc caggcagcca 1021 acaagaacaa cgacgccctg cgccaggcca agcaggagat gatggaatac cgacaccaga 1081 tccagtccta cacctgcgag attgacgccc tcaagggcac taacgattcc ctgatgaggc 1141 agatgcggga attggaggac cgatttgcca gtgaggccag tggctaccag gacaacattg 1201 cacgcctgga ggaggaaatc cggcacctca aggatgagat ggcccgccat ctgcgcgagt 1261 accaggacct gctcaacgtg aagatggccc tggatgtgga gattgccacc taccggaagc 1321 tgctggaggg agaggagagc cggatcaatc tccccatcca gacctactct gccctcaatt 1381 tccgagaaac cagccctgag caaaggggtt ctgaggtcca taccaagaag acggtgatga 1441 tcaagaccat cgagacacgg gatggggagg tcgtcagtga ggccacacag cagcagcatg 1501 aagtgctcta aagacagaga ccctctgcca ccagagaccg tcctcacccc tgtcctcact 1561 gctccctgaa gccagccttc ttccatccca ggacaccaca cccagcctca gtcctcccct 1621 cacagcctct gacccctcct cactggccat ccctcgtggt ccccaacagc gacatagccc 1681 atccctgcct ggtcacaggg catgccccgg ccacctctgc ggaccccagc tgtgagcctt 1741 ggctgttggc agtgagtgag cctggctctt gtgctggatg gagcccaggc gggagcggtg 1801 gccctgtccc tcccacctct gtgacctcag gcactagcct ttggctctgg agacagcccc 1861 agagcagggt gttgggatac tgcagggcca ggactgagcc ccgcagacct ccccagcccc 1921 tagcccagga gagagaaagc caggcaggta gccaggggga ctagcccctg tggagactgg 1981 ggggcttgaa attgtccccg tggtctctta ctttcctttc cccagcccag ggtggactta 2041 gaaagcaggg gctacaagag ggaatccccg aaggtgctgg aggtgggagc aggagattga 2101 gaaggagaga aagtgggtga gatgctggag aagagaggag aggagagagg cagagagcgg 2161 tctcaggctg gtgggagggg cgcccacctc cccacgccct cccctcccct gctgcagggg 2221 ctctggagag aaacaataaa gagattcaca cacaagcaaa aaaaaaaaaa aaaaaa //